FFCP PHASE1:Hg19::chr2:73248062..73248100,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94097 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16073 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-94bp_to_ENST00000463277_5end | |||
|coexpression_cluster_id=C1197 | |||
|description=CAGE_peak_21_at_SFXN5_5end | |||
|id=chr2:73248062..73248100,- | |||
|ontology_enrichment_celltype=CL:0000181!2.55e-29!12;CL:0000417!2.55e-29!12;CL:0000668!2.55e-29!12;CL:0000414!2.55e-29!12;CL:0000412!2.55e-29!12;CL:0000182!2.55e-29!12;CL:0002590!8.26e-11!3;CL:0002603!2.49e-10!3;CL:0000946!1.59e-08!1;CL:0000786!1.59e-08!1;CL:0000980!1.59e-08!1;CL:0000223!7.42e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.45e-30;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.22e-30,12;CL:0000223,6.02e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.29e-33;11!UBERON:0009497;3.65e-28;13!UBERON:0001041;9.88e-13;30!UBERON:0003104;4.36e-12;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!9.47e-32!26;UBERON:0002107!6.36e-30!19;UBERON:0006925!6.36e-30!19;UBERON:0008836!6.36e-30!19;UBERON:0008835!1.17e-25!22;UBERON:0003894!1.17e-25!22;UBERON:0009854!1.75e-24!23;UBERON:0007499!2.06e-22!25;UBERON:0009497!2.06e-22!25;UBERON:0000015!2.06e-22!25;UBERON:0002423!2.06e-22!25;UBERON:0006235!2.06e-22!25;UBERON:0004161!2.06e-22!25;UBERON:0009856!1.69e-21!26;UBERON:0002365!8.33e-18!31;UBERON:0002330!8.33e-18!31;UBERON:0005172!1.14e-16!55;UBERON:0005173!1.14e-16!55;UBERON:0002368!1.31e-15!35;UBERON:0002417!8.16e-15!61;UBERON:0000916!8.16e-15!61;UBERON:0003929!2.14e-14!54;UBERON:0000949!7.93e-12!45;UBERON:0002530!1.05e-10!59;UBERON:0002106!4.60e-10!3;UBERON:0004854!4.60e-10!3;UBERON:0009034!4.60e-10!3;UBERON:0002095!4.60e-10!3;UBERON:0004782!4.60e-10!3;UBERON:0003281!4.60e-10!3;UBERON:0009664!4.60e-10!3;UBERON:0002296!4.60e-10!3;UBERON:0005602!4.60e-10!3;UBERON:0001179!4.60e-10!3;UBERON:0006293!4.60e-10!3;UBERON:0007195!7.56e-09!1;UBERON:0005911!8.07e-09!82;UBERON:0005177!1.61e-07!107;UBERON:0001041!5.11e-07!98;UBERON:0009569!5.23e-07!113;UBERON:0004921!5.81e-07!129;UBERON:0004185!5.81e-07!129;UBERON:0002405!7.82e-07!115;UBERON:0005284!8.17e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.21e-40;1!UBERON:0002107;7.67e-34;19!UBERON:0006925;7.67e-34;19!UBERON:0002423;6.14e-26;25!UBERON:0002365;7.48e-21;31!UBERON:0002330;7.48e-21;31!UBERON:0002368;6.00e-20;33!UBERON:0005172;2.09e-10;52!UBERON:0005173;2.09e-10;52!UBERON:0000949;4.15e-09;43!UBERON:0002530;2.45e-08;57!UBERON:0002417;8.13e-08;58!UBERON:0000916;8.13e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.30e-40,1;UBERON:0002107,7.04e-34,19;UBERON:0006925,7.04e-34,19;UBERON:0008836,7.04e-34,19;UBERON:0008835,2.19e-29,22;UBERON:0003894,2.19e-29,22;UBERON:0009854,3.80e-28,23;UBERON:0007499,5.75e-26,25;UBERON:0009497,5.75e-26,25;UBERON:0000015,5.75e-26,25;UBERON:0002423,5.75e-26,25;UBERON:0006235,5.75e-26,25;UBERON:0004161,5.75e-26,25;UBERON:0009856,5.31e-25,26;UBERON:0002365,4.17e-21,31;UBERON:0002330,4.17e-21,31;UBERON:0002368,8.68e-19,35;UBERON:0000949,8.74e-15,45;UBERON:0003929,1.93e-12,54;UBERON:0005172,1.93e-12,54;UBERON:0005173,1.93e-12,54;UBERON:0002530,1.91e-11,59;UBERON:0002417,2.88e-11,60;UBERON:0000916,2.88e-11,60;UBERON:0005911,2.05e-08,82;UBERON:0001041,5.76e-08,87;UBERON:0005177,6.11e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.315132729228895,0.164831716762333,0.26961417541674,3.14967940847196,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p21@SFXN5 | |||
}} |
Revision as of 03:53, 21 January 2014
Short description: | p21@SFXN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SFXN5_5end |
Coexpression cluster: | C1197_hepatoma_Hepatocyte_liver_argyrophil_hepatocellular_gastrointestinal_mesothelioma |
Association with transcript: | -94bp_to_ENST00000463277_5end |
EntrezGene: | SFXN5 |
HGNC: | 16073 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.22e-30 | 12 |
endodermal cell | 6.02e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.30e-40 | 1 |
liver | 7.04e-34 | 19 |
digestive gland | 7.04e-34 | 19 |
liver bud | 7.04e-34 | 19 |
hepatic diverticulum | 2.19e-29 | 22 |
liver primordium | 2.19e-29 | 22 |
digestive tract diverticulum | 3.80e-28 | 23 |
epithelial sac | 5.75e-26 | 25 |
epithelium of foregut-midgut junction | 5.75e-26 | 25 |
anatomical boundary | 5.75e-26 | 25 |
hepatobiliary system | 5.75e-26 | 25 |
foregut-midgut junction | 5.75e-26 | 25 |
septum transversum | 5.75e-26 | 25 |
sac | 5.31e-25 | 26 |
exocrine gland | 4.17e-21 | 31 |
exocrine system | 4.17e-21 | 31 |
endocrine gland | 8.68e-19 | 35 |
endocrine system | 8.74e-15 | 45 |
gut epithelium | 1.93e-12 | 54 |
abdomen element | 1.93e-12 | 54 |
abdominal segment element | 1.93e-12 | 54 |
gland | 1.91e-11 | 59 |
abdominal segment of trunk | 2.88e-11 | 60 |
abdomen | 2.88e-11 | 60 |
endo-epithelium | 2.05e-08 | 82 |
foregut | 5.76e-08 | 87 |
trunk region element | 6.11e-07 | 101 |