FFCP PHASE1:Hg19::chr2:216285491..216285502,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216285491..216285502,+ | |||
|id=chr2:216285491..216285502,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.83e-14!180;CL:0002371!4.97e-13!591;CL:0000057!7.86e-12!75;CL:0000144!9.98e-12!625;CL:0000048!1.16e-10!430;CL:0000723!1.26e-10!436;CL:0000034!5.35e-10!444;CL:0000548!8.50e-10!679;CL:0000004!8.50e-10!679;CL:0000255!8.50e-10!679;CL:0000012!1.31e-09!682;CL:0002320!3.80e-09!365;CL:0002620!8.66e-08!23;CL:0000003!2.98e-07!722;CL:0002570!4.16e-07!8;CL:0000219!4.77e-07!390;CL:0000134!4.96e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.30e-11;23!CL:0002564;5.24e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.93e-13,76;CL:0002620,3.13e-11,23;CL:0002320,3.28e-09,361;CL:0002564,5.64e-08,3;CL:0000134,7.66e-08,354;CL:0000048,7.97e-07,427;CL:0002570,9.65e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0003099;5.89e-07;1!UBERON:0003852;5.89e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:3571,7.39e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002384!6.63e-10!375;UBERON:0000914!1.49e-08!83;UBERON:0002329!1.49e-08!83;UBERON:0003077!1.49e-08!83;UBERON:0003059!1.49e-08!83;UBERON:0007282!1.49e-08!83;UBERON:0009618!1.49e-08!83;UBERON:0007285!1.49e-08!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0002242;5.24e-08;3!UBERON:0005705;5.89e-07;1!UBERON:0008193;5.89e-07;1!UBERON:0010912;5.89e-07;1!UBERON:0002514;5.89e-07;1!UBERON:0003457;5.89e-07;1!UBERON:0008907;5.89e-07;1!UBERON:0008001;5.89e-07;1!UBERON:0007213;5.89e-07;1!UBERON:0009891;5.89e-07;1!UBERON:0007914;5.89e-07;1!UBERON:0007375;5.89e-07;1!UBERON:0003323;5.89e-07;1!UBERON:0010258;5.89e-07;1!UBERON:0005253;5.89e-07;1!UBERON:0007842;5.89e-07;1!UBERON:0002397;5.89e-07;1!UBERON:0003113;5.89e-07;1!UBERON:0003277;5.89e-07;1!UBERON:0001709;5.89e-07;1!UBERON:0002244;5.89e-07;1!UBERON:0005620;5.89e-07;1!UBERON:0010364;5.89e-07;1!UBERON:0004288;5.89e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.51e-10,371;UBERON:0002242,5.64e-08,3;UBERON:0003068,5.64e-08,3;UBERON:0002328,5.64e-08,3;UBERON:0004880,5.64e-08,3;UBERON:0005705,6.60e-07,1;UBERON:0008193,6.60e-07,1;UBERON:0010912,6.60e-07,1;UBERON:0002514,6.60e-07,1;UBERON:0003457,6.60e-07,1;UBERON:0008907,6.60e-07,1;UBERON:0008001,6.60e-07,1;UBERON:0007213,6.60e-07,1;UBERON:0009891,6.60e-07,1;UBERON:0007914,6.60e-07,1;UBERON:0009292,6.60e-07,1;UBERON:0003099,6.60e-07,1;UBERON:0007375,6.60e-07,1;UBERON:0003323,6.60e-07,1;UBERON:0010258,6.60e-07,1;UBERON:0007842,6.60e-07,1;UBERON:0009494,6.60e-07,1;UBERON:0010042,6.60e-07,1;UBERON:0010045,6.60e-07,1;UBERON:0010259,6.60e-07,1;UBERON:0010359,6.60e-07,1;UBERON:0009526,6.60e-07,1;UBERON:0002397,6.60e-07,1;UBERON:0003113,6.60e-07,1;UBERON:0003277,6.60e-07,1;UBERON:0001709,6.60e-07,1;UBERON:0004066,6.60e-07,1;UBERON:0002244,6.60e-07,1;UBERON:0005620,6.60e-07,1;UBERON:0004362,6.60e-07,1;UBERON:0010364,6.60e-07,1;UBERON:0010046,6.60e-07,1;UBERON:0005868,6.60e-07,1;UBERON:0007238,6.60e-07,1;UBERON:0004288,6.60e-07,1;UBERON:0004068,6.60e-07,1;UBERON:0010334,6.60e-07,1;UBERON:0003852,6.60e-07,1;UBERON:0010253,6.60e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0,0,0,1.58260186937072,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0,0,0,4.86634870302636,0,0,0.351339142772504,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,11.1866282092037,1.41867352879343,0,0,1.48000529050296,0,0.67355336034844,0.490385709340376,0,1.72852777344,0,2.49728061464256,0,1.49448680551801,0.352303495931295,0,0.280901613404497,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.612975591598039,0.300476117813194,0,5.91985797773244,0,0,2.70081986475962,0,4.3798891807757,0,0.168776332241266,0.194874010322397,10.3497847440087,0.0920498986422993,0,3.55009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,3.57656445851882,1.690605505112,0,1.04007436911366,0,0,0.799266537048298,0,0,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,2.10833939483032,0.239624855491583,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.50051156317903,1.08506009479894,0.415941723061614,0.713715955188647,0.473107245101804,0,0.300946099727719,0,1.03473071292505,0,0.553107505625109,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.306923946576125,2.24528075546459,0,0,1.76939313257968,0,0,1.77561725313127,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0.308097234229289,0.460511024178389,0,0,0.145016693914229,0.852266274161009,0.178064071293475,0,0.384380134730212,0,0,0,9.12955805808856,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0.571890581771475,0,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0,1.36310417428337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.467426619694449,1.66441758450784,1.32582103692562,0.50313580350515,0,0,2.11723293268535,0.621748802331122,0.591420599958536,0,0.449803112163605,0.776314784381297,0.414706207840855,0.265841714557995,0,0,0,0,0.181848659202559,0.429642228169954,2.78420255927096,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0.318004350653419,0,0,2.1160556621441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0.4582137370881,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:216285491..216285502,+ | |||
}} |
Revision as of 08:26, 21 January 2014
Short description: | p@chr2:216285491..216285502, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216285491..216285502, + |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.93e-13 | 76 |
skin fibroblast | 3.13e-11 | 23 |
connective tissue cell | 3.28e-09 | 361 |
nucleus pulposus cell of intervertebral disc | 5.64e-08 | 3 |
mesenchymal cell | 7.66e-08 | 354 |
multi fate stem cell | 7.97e-07 | 427 |
mesenchymal stem cell of adipose | 9.65e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 7.39e-07 | 1 |