FFCP PHASE1:Hg19::chr2:216289020..216289031,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216289020..216289031,- | |||
|id=chr2:216289020..216289031,- | |||
|ontology_enrichment_celltype=CL:0000055!2.18e-29!180;CL:0000057!9.01e-25!75;CL:0002371!1.37e-15!591;CL:0000144!5.29e-13!625;CL:0000680!7.66e-11!57;CL:0000056!7.66e-11!57;CL:0000355!7.66e-11!57;CL:0000048!1.95e-10!430;CL:0000723!4.47e-10!436;CL:0000187!1.37e-09!54;CL:0000034!1.95e-09!444;CL:0000183!2.03e-09!59;CL:0002334!4.61e-09!12;CL:0000548!2.77e-08!679;CL:0000004!2.77e-08!679;CL:0000255!2.77e-08!679;CL:0002620!4.54e-08!23;CL:0000012!6.85e-08!682;CL:0000393!1.07e-07!60;CL:0000211!1.07e-07!60;CL:0000222!5.62e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.15e-13;12!CL:0000057;4.43e-12;73!CL:0002620;4.16e-10;23!CL:0000723;5.32e-10;61!CL:0000134;5.85e-10;55!CL:0002570;2.27e-09;8!CL:0002320;9.25e-09;188!CL:0000188;2.78e-08;9!CL:0000034;4.19e-08;69!CL:0000048;5.92e-08;58!CL:0000680;3.72e-07;7!CL:0002494;8.71e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.66e-32,76;CL:0000048,7.01e-17,427;CL:0000723,3.96e-16,433;CL:0000034,3.65e-15,441;CL:0002334,2.99e-13,12;CL:0002320,1.21e-12,361;CL:0000134,1.36e-11,354;CL:0002620,7.75e-10,23;CL:0002570,2.21e-09,8;CL:0000219,2.25e-09,386;CL:0000188,2.86e-08,9;CL:0002494,5.80e-07,16;CL:0002540,6.07e-07,6;CL:0002548,8.13e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.15e-13!83;UBERON:0002329!1.15e-13!83;UBERON:0003077!1.15e-13!83;UBERON:0003059!1.15e-13!83;UBERON:0007282!1.15e-13!83;UBERON:0009618!1.15e-13!83;UBERON:0007285!1.15e-13!83;UBERON:0005256!3.38e-13!143;UBERON:0004290!7.37e-12!70;UBERON:0000486!2.76e-11!82;UBERON:0002385!2.08e-10!63;UBERON:0001015!2.08e-10!63;UBERON:0000383!2.08e-10!63;UBERON:0001134!3.19e-10!61;UBERON:0002036!3.19e-10!61;UBERON:0003082!3.19e-10!61;UBERON:0003914!9.48e-10!118;UBERON:0004872!1.91e-09!84;UBERON:0000490!4.45e-09!138;UBERON:0002100!9.29e-09!216;UBERON:0001009!2.11e-08!113;UBERON:0004535!2.91e-08!110;UBERON:0002049!5.37e-08!79;UBERON:0007798!5.37e-08!79;UBERON:0001013!2.91e-07!14;UBERON:0002199!3.83e-07!45;UBERON:0002416!3.83e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.13e-09;14!UBERON:0002384;1.97e-08;198!UBERON:0003688;1.11e-07;6!UBERON:0002358;1.11e-07;6!UBERON:0003684;1.11e-07;6!UBERON:0001178;1.11e-07;6!UBERON:0001134;3.35e-07;16!UBERON:0002036;3.35e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.02e-13,371;UBERON:0001013,4.12e-09,14;UBERON:0002199,6.42e-09,46;UBERON:0002416,6.42e-09,46;UBERON:0002097,9.00e-08,41;UBERON:0003688,9.71e-08,6;UBERON:0002358,9.71e-08,6;UBERON:0003684,9.71e-08,6;UBERON:0001178,9.71e-08,6;UBERON:0007524,1.93e-07,73;UBERON:0002329,2.88e-07,71;UBERON:0003059,2.88e-07,71;UBERON:0007282,2.88e-07,71;UBERON:0004290,2.88e-07,71;UBERON:0009618,2.88e-07,71;UBERON:0003077,4.68e-07,72;UBERON:0007285,4.68e-07,72;UBERON:0007503,5.13e-07,78 | |||
|phase1_expression=2.18014055124668,3.21150785836475,2.81908808191942,4.00293193412522,2.68176656656373,2.61701557230111,0,3.15859936713415,0.261185628199839,0.491467873003018,0.697801167972428,1.96597234917155,3.4289707169699,0.618831764800233,0.662794751455832,0.672325146451775,1.20538905604795,1.46062018077475,2.43966399395253,0.123121058076788,1.02000345622126,0.313454721478088,0,0.136874425072884,0.753255837568817,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,1.34140171940727,1.53435074212236,0.722878304769133,3.00802746381534,0.724232594804119,22.2680065174308,38.4441547539082,0,0.886917589850256,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,1.13061588384802,0.838998872419812,2.20094433552054,0.626984899610432,0.258416759169329,0,0.66944122552934,0,0,0,0,3.24056779152704,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,15.9031024542502,2.02608818663328,6.62045904066094,8.89193524321323,2.12801029319014,2.80338800071154,1.06748995729705,2.96001058100592,5.91300967259556,1.88594940897563,2.28846664358842,4.38936540170301,4.03323147135999,0.234321431833797,1.24864030732128,0,2.54062756938062,1.17434498643765,0.647491777472526,1.12360645361799,1.02077085627447,0.122834317311768,0.103325781175765,0,1.48360157567134,2.73048408581408,2.15585442544872,0.168336113954066,1.37630371859161,1.10825646193673,0.438977620880838,2.45190236639216,1.05166641234618,0.907457465280168,1.61450672119976,1.06778694409284,2.33125091275518,3.60109315301283,1.8549455262919,3.34932702059318,1.67505170698431,3.54430297706659,2.04617710838517,4.03894038790583,2.30124746605748,0.323292113637624,6.39017266529906,1.0075209822764,0.67824236924195,0.57978255948989,0.818238361772504,0,0.121973706129595,0,0.580969714347592,0,0,0,0,1.92972281457866,2.76269842704961,6.03678306441573,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.6462960453256,2.94017422771084,1.26755034821831,1.96565443335525,0.590789906681404,0,0.122988438543114,0.343135620597051,0.658501712451753,0,0.100528972411631,0,0.325808305310325,1.03993478527958,0,0,1.29149563659404,0.433099343283221,0.925971025153221,0.761016608938393,0,0,0,0,0,0,0.839910640994298,0.141775097242386,2.68675568108545,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0.763976851116555,0,0,0.308482478109971,0.300343057843917,0,0.224262168690721,1.30788020649984,0.51336800074665,0.775630294546667,3.57656445851882,4.22651376278,0.531876233169741,0,1.54324424557285,2.83698264046557,2.39779961114489,0.57191197463259,1.08524321078289,0.823240336780769,2.93162565864362,0,1.58390374586686,0.602878754119172,0.871533458600294,0,0,0,0,2.63587341040741,1.14861935834114,1.42636905040718,1.15825045334063,4.52047909610843,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,3.50119364741774,1.89885516589815,10.814484799602,17.3076119133247,4.73107245101804,4.68565659970853,2.10662269809403,0,1.03473071292505,0.664225598535437,1.84369168541703,1.21637060255316,0.783204629850962,1.02943027143257,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,5.45837177201309,5.37116906508219,8.13914273855913,3.33161788064823,2.55853624533352,4.02134802859019,4.45254199334973,2.00472601943452,2.48586415438378,1.39616165223476,1.55776328755086,2.32420756919918,0,1.80455823272956,0.0920809889358963,0.459257792658427,0.728364672026868,0.655622074797121,0,0.15403067420883,0,0,0.633309773357254,0,0,1.51141141271498,1.54227252690289,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0.650060246036521,0,1.54673149267395,1.84858340537573,3.37708084397485,1.37836572484531,2.47066563197029,4.20548412351263,1.02271952899321,1.33548053470106,0.661139661443912,1.15314040419064,1.40373983744043,1.31505115112215,0,5.66662224295152,0,0,0.532306030317022,0,1.11194531462352,0.143124886741991,0.744316738719335,1.89827654831236,0.953150969619124,0.511795582622668,0,0.95460974377781,0.78494864019923,0.539617372749944,0.823611089208164,0.471249609382746,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0.848432591722276,0,0,2.65375590096488,1.31535265576129,1.15755106853338,5.24715801637306,1.82619339266434,0.6196469961995,0.563391205064483,0.430234056612155,0.982490410131212,2.1400263088875,0,0.633322905892992,0.987884678879706,0,0.349934720244983,0,0,0,0.376575203107117,0,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,3.58116727106535,0.296964680832639,1.22864280839693,0,0,5.89936136621401,0,0,2.59022384726391,0,0,0,0,7.15391051622157,0,0,0,3.45251919729268,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683652335082007,0,0,0,15.3120556671321,1.92354946143911,59.1668601380685,0,0,0,0,0,0,0,0,0.210998064528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| |||
|short_description=p@chr2:216289020..216289031,- | |||
}} |
Revision as of 08:26, 21 January 2014
Short description: | p@chr2:216289020..216289031, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216289020..216289031, - |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.66e-32 | 76 |
multi fate stem cell | 7.01e-17 | 427 |
somatic stem cell | 3.96e-16 | 433 |
stem cell | 3.65e-15 | 441 |
preadipocyte | 2.99e-13 | 12 |
connective tissue cell | 1.21e-12 | 361 |
mesenchymal cell | 1.36e-11 | 354 |
skin fibroblast | 7.75e-10 | 23 |
mesenchymal stem cell of adipose | 2.21e-09 | 8 |
motile cell | 2.25e-09 | 386 |
cell of skeletal muscle | 2.86e-08 | 9 |
cardiocyte | 5.80e-07 | 16 |
mesenchymal stem cell of the bone marrow | 6.07e-07 | 6 |
cardiac fibroblast | 8.13e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.02e-13 | 371 |
adipose tissue | 4.12e-09 | 14 |
integument | 6.42e-09 | 46 |
integumental system | 6.42e-09 | 46 |
skin of body | 9.00e-08 | 41 |
omentum | 9.71e-08 | 6 |
peritoneum | 9.71e-08 | 6 |
abdominal cavity | 9.71e-08 | 6 |
visceral peritoneum | 9.71e-08 | 6 |
dense mesenchyme tissue | 1.93e-07 | 73 |
somite | 2.88e-07 | 71 |
presomitic mesoderm | 2.88e-07 | 71 |
presumptive segmental plate | 2.88e-07 | 71 |
dermomyotome | 2.88e-07 | 71 |
trunk paraxial mesoderm | 2.88e-07 | 71 |
paraxial mesoderm | 4.68e-07 | 72 |
presumptive paraxial mesoderm | 4.68e-07 | 72 |
epithelial vesicle | 5.13e-07 | 78 |