FFCP PHASE1:Hg19::chr2:238600789..238600925,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9208 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6702 | |||
|TSSclassifier=strong | |||
|UniProt=E7EVD7,B4DPC0,Q32MZ4 | |||
|association_with_transcript=0bp_to_ENST00000244815,ENST00000391999,NM_001137551,NM_001137552,NM_001137553,NM_004735,uc002vxd.2,uc002vxe.2,uc002vxf.2,uc010znm.1_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_LRRFIP1_5end | |||
|id=chr2:238600789..238600925,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.86e-51!140;CL:0000037!3.59e-50!172;CL:0000566!3.59e-50!172;CL:0002032!3.14e-47!165;CL:0000837!3.14e-47!165;CL:0000988!1.71e-46!182;CL:0002031!6.11e-40!124;CL:0002087!1.20e-39!119;CL:0000766!8.41e-38!76;CL:0000763!2.31e-36!112;CL:0000049!2.31e-36!112;CL:0000557!1.05e-34!71;CL:0002009!8.05e-31!65;CL:0000839!5.30e-30!70;CL:0002194!1.07e-29!63;CL:0000576!1.07e-29!63;CL:0000040!1.07e-29!63;CL:0000559!1.07e-29!63;CL:0002057!5.67e-26!42;CL:0000860!2.97e-22!45;CL:0000134!1.85e-20!358;CL:0002320!5.87e-18!365;CL:0000219!8.01e-16!390;CL:0000048!1.03e-10!430;CL:0000063!1.42e-10!578;CL:0000723!2.22e-10!436;CL:0000542!7.75e-10!53;CL:0000051!7.75e-10!53;CL:0000034!8.03e-10!444;CL:0000838!9.23e-10!52;CL:0000451!6.18e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.28e-20;33!CL:0002057;8.28e-20;33!CL:0000473;9.69e-19;39!CL:0000234;9.69e-19;39!CL:0000576;7.60e-18;48!CL:0000766;2.80e-17;69!CL:0000738;2.85e-12;136!CL:0002087;6.52e-12;104!CL:0000763;3.88e-11;100!CL:0000988;1.28e-08;177!CL:0000451;6.22e-07;10!CL:0000219;6.87e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.26e-54,136;CL:0000037,2.30e-52,168;CL:0002032,2.12e-49,161;CL:0000837,2.12e-49,161;CL:0000988,1.48e-48,177;CL:0002031,2.38e-42,120;CL:0002087,4.02e-42,115;CL:0000766,3.00e-41,72;CL:0000763,8.48e-39,108;CL:0000049,8.48e-39,108;CL:0000557,4.07e-38,67;CL:0002009,3.66e-34,61;CL:0000839,4.45e-33,66;CL:0002194,5.02e-33,59;CL:0000576,5.02e-33,59;CL:0000040,5.02e-33,59;CL:0000559,5.02e-33,59;CL:0000473,2.09e-28,48;CL:0000234,2.09e-28,48;CL:0000860,5.67e-26,42;CL:0002057,5.67e-26,42;CL:0000134,2.16e-21,354;CL:0002320,8.13e-19,361;CL:0000219,1.35e-16,386;CL:0000048,3.44e-11,427;CL:0000723,7.60e-11,433;CL:0000034,2.86e-10,441;CL:0000542,7.75e-10,53;CL:0000051,7.75e-10,53;CL:0000838,9.23e-10,52;CL:0000451,6.18e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;6.64e-19;42!CL:0000049;4.90e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.00e-37!102;UBERON:0003061!1.00e-37!102;UBERON:0002193!2.85e-36!112;UBERON:0002371!1.38e-29!80;UBERON:0001474!1.90e-26!86;UBERON:0002405!5.28e-22!115;UBERON:0004765!1.53e-21!101;UBERON:0001434!1.53e-21!101;UBERON:0002384!3.16e-18!375;UBERON:0003081!5.40e-18!216;UBERON:0000178!1.67e-07!15;UBERON:0000179!1.67e-07!15;UBERON:0000463!1.67e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.70e-07;15!UBERON:0000179;1.70e-07;15!UBERON:0000463;1.70e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.00e-40,98;UBERON:0003061,2.00e-40,98;UBERON:0002193,1.06e-38,108;UBERON:0002371,2.58e-32,76;UBERON:0002405,7.71e-32,93;UBERON:0001474,8.32e-29,82;UBERON:0004765,6.23e-24,90;UBERON:0001434,2.64e-21,100;UBERON:0003081,4.53e-21,203;UBERON:0002384,4.41e-19,371;UBERON:0000926,1.97e-10,315;UBERON:0004120,1.97e-10,315;UBERON:0006603,1.97e-10,315;UBERON:0000178,1.67e-07,15;UBERON:0000179,1.67e-07,15;UBERON:0000463,1.67e-07,15 | |||
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| |||
|short_description=p1@LRRFIP1 | |||
}} |
Revision as of 09:27, 21 January 2014
Short description: | p1@LRRFIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRFIP1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000244815, ENST00000391999, NM_001137551, NM_001137552, NM_001137553, NM_004735, uc002vxd.2, uc002vxe.2, uc002vxf.2, uc010znm.1_5end |
EntrezGene: | LRRFIP1 |
HGNC: | 6702 |
UniProt: | E7EVD7B4DPC0Q32MZ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.00e-40 | 98 |
blood island | 2.00e-40 | 98 |
hemolymphoid system | 1.06e-38 | 108 |
bone marrow | 2.58e-32 | 76 |
immune system | 7.71e-32 | 93 |
bone element | 8.32e-29 | 82 |
skeletal element | 6.23e-24 | 90 |
skeletal system | 2.64e-21 | 100 |
lateral plate mesoderm | 4.53e-21 | 203 |
connective tissue | 4.41e-19 | 371 |
mesoderm | 1.97e-10 | 315 |
mesoderm-derived structure | 1.97e-10 | 315 |
presumptive mesoderm | 1.97e-10 | 315 |
blood | 1.67e-07 | 15 |
haemolymphatic fluid | 1.67e-07 | 15 |
organism substance | 1.67e-07 | 15 |