FFCP PHASE1:Hg19::chr2:240322663..240322676,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9759 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14063 | |||
|TSSclassifier=strong | |||
|UniProt=P56524,Q86YH7 | |||
|association_with_transcript=-20bp_to_ENST00000345617,NM_006037,uc002vyk.3_5end | |||
|description=CAGE_peak_4_at_HDAC4_5end | |||
|id=chr2:240322663..240322676,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.59e-16!115;UBERON:0001017!2.72e-13!82;UBERON:0001049!3.43e-13!57;UBERON:0005068!3.43e-13!57;UBERON:0006241!3.43e-13!57;UBERON:0007135!3.43e-13!57;UBERON:0002616!9.01e-13!59;UBERON:0005743!1.75e-12!86;UBERON:0000955!4.12e-12!69;UBERON:0006238!4.12e-12!69;UBERON:0000073!2.06e-11!94;UBERON:0001016!2.06e-11!94;UBERON:0003080!5.25e-10!42;UBERON:0003075!7.02e-10!86;UBERON:0007284!7.02e-10!86;UBERON:0002780!1.53e-09!41;UBERON:0001890!1.53e-09!41;UBERON:0006240!1.53e-09!41;UBERON:0002346!3.15e-09!90;UBERON:0001893!2.09e-08!34;UBERON:0002020!2.63e-08!34;UBERON:0003528!2.63e-08!34;UBERON:0002791!5.78e-08!33;UBERON:0001869!1.55e-07!32;UBERON:0003056!7.99e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.33e-12;53!UBERON:0002616;2.33e-12;53!UBERON:0001893;6.40e-12;34!UBERON:0002780;1.60e-11;41!UBERON:0001890;1.60e-11;41!UBERON:0003528;1.75e-11;34!UBERON:0002020;1.75e-11;34!UBERON:0002791;2.38e-11;32!UBERON:0001869;3.12e-11;32!UBERON:0000956;1.85e-09;25!UBERON:0000203;1.85e-09;25!UBERON:0002619;6.27e-09;22!UBERON:0001950;1.04e-08;20!UBERON:0000955;1.97e-07;68!UBERON:0007023;3.79e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.03e-20,114;UBERON:0000073,1.04e-20,53;UBERON:0002616,1.04e-20,53;UBERON:0001049,2.75e-20,56;UBERON:0005068,2.75e-20,56;UBERON:0006241,2.75e-20,56;UBERON:0007135,2.75e-20,56;UBERON:0001017,9.48e-17,81;UBERON:0002780,2.02e-16,41;UBERON:0001890,2.02e-16,41;UBERON:0003080,2.02e-16,41;UBERON:0006240,2.02e-16,41;UBERON:0000955,4.98e-16,68;UBERON:0006238,4.98e-16,68;UBERON:0001016,5.75e-16,89;UBERON:0003075,1.17e-15,82;UBERON:0007284,1.17e-15,82;UBERON:0001893,1.45e-14,34;UBERON:0003528,2.18e-14,34;UBERON:0002020,2.18e-14,34;UBERON:0002346,2.94e-14,86;UBERON:0001869,5.24e-13,32;UBERON:0002791,6.12e-13,32;UBERON:0010371,6.37e-13,104;UBERON:0003056,5.80e-12,61;UBERON:0000956,1.35e-09,25;UBERON:0000203,1.35e-09,25;UBERON:0002619,3.47e-09,22;UBERON:0001950,6.28e-09,20;UBERON:0010314,1.14e-08,132;UBERON:0011216,1.30e-08,223;UBERON:0000025,3.88e-08,192;UBERON:0004121,1.63e-07,171;UBERON:0000924,1.63e-07,171;UBERON:0006601,1.63e-07,171 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0.522371256399677,0.491467873003018,0.697801167972428,0.218441372130172,0.263766978228454,0.495065411840187,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0,0.626909442956176,0.85870796139317,1.36874425072884,1.12988375635323,0,0.164201178899891,0.314843125254717,1.57345710739562,0,1.08371286321253,0.919421224478927,0.30120591877825,0,0.0774672005803016,0.568676929949686,0,3.32397245119126,2.20598892217156,1.95309783644267,0.223915474239924,0.32389366601898,0.77272670290256,0.145398238779565,0.377875943688809,1.21292030593908,0.232429036905685,1.23350366406548,0.309706370895104,2.01384674625505,2.81776777182011,1.41889337933151,1.37898272294647,0.645484683583826,1.35426486594342,0.752969358170419,0.818718450173537,0.449446968890169,0.306083892370903,0,0.639337125799041,2.30895910130701,1.39624560335142,0.852449501065388,0.580418477257168,1.70215567407342,0,1.7587406567972,2.08593167368081,1.95469960234605,0.605399502633369,0.368277635987565,0,0.211255286311942,0.637812899895131,0.209658645508376,1.68492946719743,0.300353785683013,0.64290234678832,0.855038231223746,0.39783335439818,0.182664153764634,0,0.546138611262131,0,0,0.400395987036012,0,0,0,1.1384259382189,3.52342313622563,1.14681968437569,3.96513985737078,1.68152568894461,0.790152254325231,1.37696839079683,2.75107533924415,1.85041349099558,0.167186495390678,3.91106719960308,0.473447805734733,0,0.222820913770347,0.589211814949674,0.886135578334485,0.541607727530031,0.384273959177026,1.43065282315866,0.657751618414705,0.276350017785848,0,2.07601188426885,0.267540828089713,4.18142095219907,0.226618685395132,0.766440987203842,3.09264700934367,1.01207876807801,0.637130828648193,0,0,0.451725357233318,0.255973222308837,0,0.710331756132051,0.821127996921047,0.80642697289893,0.267440195783507,0.724122019413995,0,1.34140171940727,0,0.361439152384566,0.50133791063589,1.01392563272577,0,1.45990461090791,0.472674085820339,0.665188192387692,0.527008714158756,1.96468613246569,0,0,0.97364218096405,0.522389211897802,0.797747763113191,0.715471872916026,0,0,0.596287222100115,0.860234595106124,0,0.56530794192401,0,0,0.835979866147242,0.775250277507987,0.35576626268671,0,0,0,1.46437234528902,0.735326160691737,0,1.7859945656816,1.12264686313085,1.23872628531654,1.53316637465883,0,0.366403487860815,1.31780417436063,3.87780264148325,0.436094052142534,0,0,0.529636723252875,0.573673241497627,0,0.560677600142307,0,0.98667019366864,0.311211035399766,0.538842688278752,0,0.151357427644931,1.72852777344,0.234321431833797,0.312160076830321,0.570471821544449,0.597794722207204,0.469737994575059,0.647491777472526,0.280901613404497,0.408308342509787,0.122834317311768,0.413303124703062,2.37600571456411,1.7308685049499,0,0,0.336672227908132,0.375355559615893,0.831192346452549,0,0,0.901428353439581,0.226864366320042,0.717558542755448,0.213557388818567,0,0.900273288253207,0.103052529238439,1.03056216018252,0.37223371266318,0.168776332241266,0.584622030967192,0.504867548488229,0.276149695926898,0.161646056818812,0.355009592516614,0,0.169560592310488,0.193260853163297,0,0,0.365921118388786,0.530119073285941,0.348581828608555,0.518305275076852,0.504641701751257,0,0,2.57296375277154,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0.241011029883482,0.55146986366197,0,0,0.539325232640658,0.196221465125346,0,0.738155454624648,2.80483547606892,0,0,1.26755034821831,0.982827216677626,1.18157981336281,3.09024169590255,0.122988438543114,0.343135620597051,0.219500570817251,0,0.402115889646523,0,0.325808305310325,0,1.44331342025273,0.115930404975077,0.117408694235822,0.288732895522148,0,0,0.790204397959275,0,2.21595305478658,0.468008530278475,1.93220510975347,0,0,0,0.179117045405697,0,0.383382679165211,0,0.352193736052904,0.414656231081544,0.864719720501769,0.37872730027914,1.90493682876507,4.20187268114105,2.34434894420094,0,1.23392991243988,1.50171528921959,2.28661146104463,0.112131084345361,0.43596006883328,0.22001485746285,0.387815147273333,0,0,0,1.04007436911366,0.257207374262142,0,0,0.857867961948885,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.699810938274399,0,0.502257091432126,0,0,1.14861935834114,0,0,0.205476322550383,0.537182889719687,0.448340575974109,1.18218456121156,0.862510299438069,1.02674429023799,0.508189248444927,0,3.86644406388848,1.34013012267479,1.27587750330633,2.24702107184155,0,1.65766205374414,0.858840442033979,0.500170521059677,0.542530047399471,0.623912584592421,0,0.315404830067869,0.585707074963566,0.300946099727719,0,1.03473071292505,0.664225598535437,0.553107505625109,0.260650843404249,0.391602314925481,0.686286847621712,1.24060815673732,3.23571301227925,1.38745825144478,0,0,0.30239029332968,0,0.767309866440312,0.561320188866147,0.384417447767103,0,0.321707842287215,0,0.154209693802656,0,0,0,0,0.483437798366489,0.200506470303285,0.0920809889358963,1.14814448164607,0.182091168006717,0.393373244878272,0,0,0.784349769176855,1.46139224653261,0.211103257785751,1.13733384070897,0.170093705276516,0.647747748306418,0,0.541892875087706,0,0.254876273045038,0,0.223874754722178,0.219259876645935,0,0,0.328014645699706,0,0.721287081534056,0.457847324091717,0.495056999523528,1.14853107599234,0,0,0.676695028044854,0,0.15350367472613,0,0.429680979473094,0.580066775656914,0.340906509664404,0.801288320820636,0,0,0.382838137483752,0.4046311234222,0.464845549297286,0,0,1.54016790088044,0,0,0.18532421910392,0,0.744316738719335,0.949138274156178,0.762520775695299,0,0.42793898803392,0.318203247925937,0,0.539617372749944,0.823611089208164,0.824686816419805,0,0,0,0.975267478179181,0.243713489631284,0,0.272999822815972,0.989838023675989,0,0.551365343546124,0,0,0,0,0.202910376962704,0.92947049429925,0,0.430234056612155,0.0982490410131212,0,0,1.26664581178598,0.987884678879706,1.13841952129715,1.04980416073495,0,0,0,0.564862804660675,0,0,0,0,0,0,1.70894156152249,0.952927101831156,0.822724546172388,0.648473311192717,0,0,0.320472213382419,0,0.490080431962063,0.185803175125719,0.144269212976445,4.69536166099533,0.478278818186467,1.1974762285969,0.383010740264733,0.423347165447766,0.324621940274555,0.280797178113459,0.456469358066384,0.626719583092093,2.50634477090067,0,0.642352300414798,0.80719882876419,2.12923118845163,0,1.53620382154229,0.671028323677248,1.16794399198336,0.19538809540204,0.556812347790485,0,0,0,0,0.18714054040822,1.02555725490326,0,0.222886768554957,1.70481688083848,0,0.593929361665277,0,0,2.81338832821025,0.333926115068718,1.31843099381408,0.63337622438398,0.996239941255349,0.828851746593443,0.503865495708552,0.511343412510774,0,0.311039587661807,0.0898683511473268,1.07412704805365,1.02314474045374,2.86065876347107,0,0,0,1.57705766875147,1.99613798001194,0,0.699679999969566,2.17499872630438,0,0.254253650292766,3.30942754475111,0,0.291604613383254,0.694499979733169,0.885741385813839,1.5677537021303,1.52581736317083,1.76926815889959,2.06883333267483,1.09692698576986,0.871507708151921,0.278847488557207,2.30850775511391,0.569710279235006,0,0.0897576444097721,0,0,0.457987967009312,0.533034776018635,0,0.627921025580099,0.166211681900156,0,0,0.335643173951685,0.75901493089674,0.317873157960757,0.210998064528027,0,0.282706142867882,0.432777279484182,1.99052386215701,1.06149077404007,0.611030144933625,0.889563386041866,1.23563938946503,1.04421949505455,2.22423738836234,0,1.63985112007737,0,0,0.728341138602278,0,0,2.14250933141343,1.76922422959766,0.150323419414493,0.311064574191741,0,0,0.313932918407225,0,0,0.554698692052555,0,0,0,1.04836000945218,0.51595809741485,0.19351266257817,0.511625219603299,0.246346371159628,1.06687918137261,1.5003541537555,0.225980740780532,0.548167698587004,0,1.51945910294109,0.195551382734803,0.240476460754601,2.34798294213288,0.599428828746391,0.288180834308212,0.343609788497747,1.02956998717179,0.14405479798815,0.372757606696298,0.235694034616795,0.271808412147228,0.732219924186332,0.203996435272644,0.866851769704557,1.20084057741958,1.50595916781192,2.55493176133945,0,0.788662062837943,1.95497680890578,0.916641696046735,2.15361907373044,0.399358000997982,0.429226048136571,0.446342914883745,1.07493555978762,0,0,1.6544468284517,1.56590130924216,1.68508859635462,1.08270229666224,0,0,2.72406812223151,0,0.412618309791701,0.415440338029185,0,3.0952078182318,2.30848315300494,0.670869375198532,0.394028536495991,1.99327434912993,0.211200673038813,1.43429871466276,0.191915197319445,0,0,1.017074150619,0,0,0,0,0.656740165994712,0.170388021785422,0.113312091520126,1.17241786942466,2.65013777824443,1.16354660725395,3.43804764530994,0,0,1.28144895081234,0.471612915298998,2.48543433208317,0.992332043623902,0.197611631897944,0,0,1.63205341010842,1.2534494701135,0.306345576763462,0.983617892129413,1.09937867375164,0.886068179966986,1.09823638411767,2.253436752717,1.14681839138014,2.10765197920019,1.73869928235874,0.415045904808692,0.124980407962107,0.758245587708239,1.7127920012698,0,0.936669811613763,1.1593682288866,0.149254802886874,0.467426619694449,0.554805861502613,0.378806010550178,0.754703705257725,0,0.228840068396924,0.302461847526478,0,0.295710299979268,0.318593534327405,0.449803112163605,0,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0.343395705182793,0.673498977531838,1.26184898228651,0,1.28664954824955,1.04397716786085,0,0,0.244736704506468,0.358177682162975,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,2.07387654227596,0,0,0,0,0.245772908753719,0,0.59996218756479,0.853533837553127,0.516644938982447,0.567515953566836,0.184105950251841,0.139879507719444,3.11038630016486,0.255788742607303,1.1860729253635,0.314531883711793,1.20130602011215,0.33946505990805,0.212574920101683,0.371807292777007,0,0,0.70975570501128,1.60114149657094,0.705351887381368,0,1.54150140231503,0,2.07524016774297,1.64093091392604,1.51243017733031,1.72893131160545,2.90656162137332,1.42769420259154,0.294443155503077,0.235939446695481,0,0.231051332300676,0,0,0.397832444232549,2.78278214892252,0,0,0,0,0,2.02612753855184,0,2.27355476151302,2.21955335678674,0,0.548257766857182,1.48863353516788,0.175871244359621,0,0,1.3451348888753,1.21393120847326,0.682986574053893,0.266107110487916,0.460935950223117,0.685952037749674,1.15548546060614,1.90741043332262,0.709163045303809,0.111231401892069,0.470958557103084,2.35673384874003,0,3.65263488203798,0,0.47775168788705,2.50167904618297,0.632054446930906,0.697448552208751,0.173858272302579,2.40513409419076,0.414432328326074,0.17071847709395,0,0,0.236664001461131,0.0852134047591577,0.846774100381858,0,0.31020638566432,2.8666168169323,0.671132590786754,0.098150233615243,0.243835849964539,0,1.02662806856247,2.3196288626764,1.94284397223656,0.233939463462106,3.18321240258189,0.594600453887843,1.92008339466232,0,0.301925687133347,0.848915739187391,0.437119121007915,0,3.18692818280077,0.471353094203252,0.981542335574726,2.0793248022896,0.8453114551668,0,0.845855261818682,1.61144719933943,0.399764623699716,0,0,0,2.19100916473955,0.458729283404541,1.72007499781742,0,2.24371917630019,2.18175345170189,0.5290268405154,1.11598505450025,1.38652688589425,0,0.126166424835079,0.98339014767326,0.253397002022874,0.509944148709909,0.26721740526556,0.459474497674225,0.50141507858475,0.985123076837112,0.267964130156178,1.65833887891756,1.55149493792843,0.852935927603924,0.476128862927481,2.0668451147522,3.04166100049704,0.112131862580613,1.01835453245064,1.21270313374932,0.870866991587845,0.342233301085281,0.942928742204225,1.29099969706817,1.33064142618405,0.244209805832924,0,0,0.628776414746108,0,0.611207220914332,0,0,2.61655931668334,0 | |||
|short_description=p4@HDAC4 | |||
}} |
Revision as of 09:32, 21 January 2014
Short description: | p4@HDAC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HDAC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000345617, NM_006037, uc002vyk.3_5end |
EntrezGene: | HDAC4 |
HGNC: | 14063 |
UniProt: | P56524Q86YH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data