FFCP PHASE1:Hg19::chr20:10199468..10199516,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6616 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11132 | |||
|TSSclassifier=strong | |||
|UniProt=P60880 | |||
|association_with_transcript=0bp_to_ENST00000254976,ENST00000304886,NM_003081,NM_130811,uc002wnq.1,uc002wnr.1,uc002wns.1,uc010gca.1,uc010gcb.1,uc010gcc.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SNAP25_5end | |||
|id=chr20:10199468..10199516,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.52e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.27e-39!82;UBERON:0005743!2.42e-37!86;UBERON:0000073!2.99e-37!94;UBERON:0001016!2.99e-37!94;UBERON:0001049!3.11e-35!57;UBERON:0005068!3.11e-35!57;UBERON:0006241!3.11e-35!57;UBERON:0007135!3.11e-35!57;UBERON:0000955!2.69e-33!69;UBERON:0006238!2.69e-33!69;UBERON:0002616!1.57e-32!59;UBERON:0003075!1.63e-29!86;UBERON:0007284!1.63e-29!86;UBERON:0002346!1.85e-29!90;UBERON:0002780!2.06e-27!41;UBERON:0001890!2.06e-27!41;UBERON:0006240!2.06e-27!41;UBERON:0003080!3.95e-26!42;UBERON:0007023!2.62e-25!115;UBERON:0002020!5.29e-23!34;UBERON:0003528!5.29e-23!34;UBERON:0001893!5.48e-23!34;UBERON:0000924!2.84e-22!173;UBERON:0006601!2.84e-22!173;UBERON:0002791!3.13e-22!33;UBERON:0001869!5.55e-22!32;UBERON:0004121!6.03e-22!169;UBERON:0003056!3.96e-21!61;UBERON:0000033!1.64e-20!123;UBERON:0000153!2.42e-19!129;UBERON:0007811!2.42e-19!129;UBERON:0000956!2.44e-17!25;UBERON:0000203!2.44e-17!25;UBERON:0002619!3.42e-17!22;UBERON:0001950!8.22e-16!20;UBERON:0000481!1.06e-15!347;UBERON:0000475!1.20e-12!365;UBERON:0000064!3.43e-12!219;UBERON:0000062!1.42e-11!511;UBERON:0000477!4.65e-11!286;UBERON:0000922!1.37e-10!612;UBERON:0003076!4.21e-10!15;UBERON:0003057!4.21e-10!15;UBERON:0000119!7.50e-10!312;UBERON:0002050!8.85e-10!605;UBERON:0005423!8.85e-10!605;UBERON:0000483!1.32e-09!309;UBERON:0000923!1.68e-09!604;UBERON:0005291!1.68e-09!604;UBERON:0006598!1.68e-09!604;UBERON:0002532!1.68e-09!604;UBERON:0000468!2.40e-09!659;UBERON:0000025!4.51e-09!194;UBERON:0004111!7.54e-09!241;UBERON:0004732!8.26e-09!13;UBERON:0004733!2.35e-08!12;UBERON:0002028!2.35e-08!12;UBERON:0007277!2.35e-08!12;UBERON:0000467!3.99e-08!625;UBERON:0000480!5.78e-08!626;UBERON:0002420!3.20e-07!9;UBERON:0007245!3.20e-07!9;UBERON:0010009!3.20e-07!9;UBERON:0010011!3.20e-07!9;UBERON:0000454!3.20e-07!9;UBERON:0002308!4.15e-07!9;UBERON:0000125!4.15e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.48e-23;32!UBERON:0001893;3.54e-23;34!UBERON:0002780;3.63e-23;41!UBERON:0001890;3.63e-23;41!UBERON:0003528;3.83e-23;34!UBERON:0002020;3.83e-23;34!UBERON:0002791;4.96e-23;32!UBERON:0000073;7.99e-23;53!UBERON:0002616;7.99e-23;53!UBERON:0000956;3.20e-20;25!UBERON:0000203;3.20e-20;25!UBERON:0002619;4.37e-20;22!UBERON:0001950;1.90e-18;20!UBERON:0000955;1.68e-17;68!UBERON:0001017;8.85e-17;75!UBERON:0001016;5.49e-16;83!UBERON:0004732;3.96e-10;13!UBERON:0004733;1.39e-09;12!UBERON:0002028;1.39e-09;12!UBERON:0011216;3.56e-09;132!UBERON:0007023;2.22e-08;114!UBERON:0002420;2.83e-08;9!UBERON:0007245;2.83e-08;9!UBERON:0010009;2.83e-08;9!UBERON:0010011;2.83e-08;9!UBERON:0000454;2.83e-08;9!UBERON:0000125;3.85e-08;9!UBERON:0002308;3.85e-08;9!UBERON:0002680;2.28e-07;9!UBERON:0001895;2.28e-07;9!UBERON:0001871;7.85e-07;6!UBERON:0000200;9.67e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.76e-44,89;UBERON:0001017,2.03e-43,81;UBERON:0001049,5.60e-43,56;UBERON:0005068,5.60e-43,56;UBERON:0006241,5.60e-43,56;UBERON:0007135,5.60e-43,56;UBERON:0000073,9.82e-41,53;UBERON:0002616,9.82e-41,53;UBERON:0000955,3.24e-38,68;UBERON:0006238,3.24e-38,68;UBERON:0003075,8.82e-37,82;UBERON:0007284,8.82e-37,82;UBERON:0002346,2.62e-36,86;UBERON:0011216,2.82e-33,223;UBERON:0002780,3.53e-32,41;UBERON:0001890,3.53e-32,41;UBERON:0003080,3.53e-32,41;UBERON:0006240,3.53e-32,41;UBERON:0010371,4.81e-28,104;UBERON:0003056,3.69e-27,61;UBERON:0003528,5.97e-27,34;UBERON:0002020,5.97e-27,34;UBERON:0001893,6.22e-27,34;UBERON:0004121,7.32e-27,171;UBERON:0000924,7.32e-27,171;UBERON:0006601,7.32e-27,171;UBERON:0007023,6.01e-26,114;UBERON:0001869,9.68e-26,32;UBERON:0002791,2.22e-25,32;UBERON:0010314,2.37e-21,132;UBERON:0000956,3.07e-20,25;UBERON:0000203,3.07e-20,25;UBERON:0002619,4.59e-20,22;UBERON:0001950,1.98e-18,20;UBERON:0003076,1.14e-11,15;UBERON:0003057,1.14e-11,15;UBERON:0000025,6.02e-11,192;UBERON:0004111,8.33e-11,240;UBERON:0000119,1.10e-10,309;UBERON:0000483,1.24e-10,306;UBERON:0004732,3.85e-10,13;UBERON:0000922,5.13e-10,592;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0005423,1.33e-09,581;UBERON:0000923,6.51e-09,560;UBERON:0010316,6.51e-09,560;UBERON:0005291,6.51e-09,560;UBERON:0006598,6.51e-09,560;UBERON:0010317,6.51e-09,560;UBERON:0002532,6.51e-09,560;UBERON:0002050,8.15e-09,564;UBERON:0002420,2.89e-08,9;UBERON:0007245,2.89e-08,9;UBERON:0010009,2.89e-08,9;UBERON:0010011,2.89e-08,9;UBERON:0000454,2.89e-08,9;UBERON:0000125,3.94e-08,9;UBERON:0002308,3.94e-08,9;UBERON:0002680,2.17e-07,9;UBERON:0001895,2.17e-07,9;UBERON:0010092,2.17e-07,9;UBERON:0001871,8.01e-07,6;UBERON:0000200,9.78e-07,6 | |||
|phase1_expression=0,0,0.563817616383885,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,2.45733936501509,0,0,0,5.07442047136191,6.2965501388304,0,0,0,0,5.90981078768582,7.75202626728161,5.32873026512749,3.14859585844162,2.73748850145768,2.63639543149086,0,0.410502947249729,0,0,0,2.32224184974114,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,1.12101712596307,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0.255973222308837,0,0.236777252044017,0.821127996921047,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0.795285947051099,0.486634870302636,3.59232305223458,7.31707011626461,2.45937399940753,120.697218071142,0,0,0,0.174129737299267,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0.516833518338658,1.42306505074684,1.33888245105868,0,0,0,0,0,4.37568668591991,3.14341121676638,3.15312145353302,0,0,0,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0.560677600142307,0,1.2333377420858,2.48968828319813,0.269421344139376,0.163461903113459,1.81628913173918,1.15235184896,0.70296429550139,0.624320153660641,0,0.448346041655403,1.87895197830024,1.94247533241758,0.98315564691574,4.49139176760765,1.22834317311768,6.81950155760052,15.4440371446667,4.20353779773547,4.55080680969013,7.18618141816238,2.35670559535693,1.50142223846357,4.43302584774693,3.07284334616587,0,5.55880817954408,0.113432183160021,1.4351170855109,0,0,0,0,1.03056216018252,0.37223371266318,1.18143432568886,1.36411807225678,0,0.0920498986422993,0,3.55009592516614,1.30977727695932,1.52604533079439,0,0,0,0.365921118388786,0.132529768321485,1.04574548582567,3.00617059544574,0.252320850875628,0.36497735907583,3.12899064659632,0.643240938192885,0,0.464367928031979,1.44375896333917,0.709840800239063,1.34867752062481,1.92808823906786,1.21323370005633,0.871517776369625,0.71181185733329,1.8876383142423,1.17732879075208,1.92373578473195,0,1.40241773803446,2.4694440679884,1.47008711385542,0,2.94848165003288,9.45263850690247,8.82926198829301,0,7.89211927373218,0,0,0,0.0925884451585296,0,0,0,1.15930404975077,2.11335649624479,0.288732895522148,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.28629153492474,0.381988425558278,0,6.84289784090821,0.514137463516618,0,2.28661146104463,1.79409734952577,0.87192013766656,1.0267360014933,0,0,0,0.26593811658487,0,5.91576960802927,5.67396528093113,7.19339883343468,10.1514375497285,4.34097284313154,1.64648067356154,1.62868092146868,11.0171504110189,3.95975936466715,11.1532569512047,17.4306691720059,2.49932477955143,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0,13.721109708013,71.5769196216919,54.9035057072164,58.7982091323564,52.3109776355594,0,0,0,2.57652132610194,11.5039219843726,17.9034915641825,0.207970861530807,0.356857977594324,0,0.117141414992713,0.902838299183157,0,5.17365356462525,0.664225598535437,1.10621501125022,3.38846096425523,1.37060810223918,1.71571711905428,0,0,0.106727557803444,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0.321707842287215,0,0.154209693802656,0.887808626565635,0.9033987161519,0.519254429183621,0.348631135379878,0,0,0,11.1370014719669,6.91946438425525,15.472680965212,0,0.15403067420883,1.56869953835371,1.46139224653261,1.05551628892876,1.13733384070897,0.170093705276516,2.59099099322567,3.08454505380579,0.812839312631559,1.50506932156456,0,0.831076008928724,1.11937377361089,0,0,1.28225062558195,0,0,0.9273691048295,0.824125183365091,0.82509499920588,0,0,0,0,4.62145851343933,4.60511024178389,0.827019434907183,1.07420244868274,3.77043404176994,1.53407929348982,0.0890320356467374,0,0,0,0,0.464845549297286,3.1481234683064,0,0,0,0.869932992075073,0,0,2.232950216158,0.632758849437452,0.571890581771475,3.32667128704734,2.56763392820352,0.636406495851874,0,8.81375042158242,16.7467588138993,12.2524898439514,0,0,0,1.95053495635836,0,0,2.72999822815972,10.6054073965285,0,0,0,0,6.36653087693356,9.18252652865286,0,0,0,5.87986544036611,0.88424136911809,0,0.709522128141196,0,0,0.379473173765715,1.39973888097993,0,0.670302275535787,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,3.83261613921294,0,0.614481528616916,0.894704431569664,1.66849141711908,0,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0,0,0,3.8605408508243,0,1056.77894957557,667.476380867883,25.8236195653142,0,0,10.9586393538088,4.69682656402951,39.8053741609756,0,0,2.17727711363265,0.359473404589307,0.537063524026827,0,3.55116260292961,0,0,770.619533145699,834.912883456661,75.8532432404538,0,0,0,0,0,0,65.1564975426368,22.4535552305106,35.4194989663916,425.155865190643,296.064256825377,813.260654570054,751.496650492602,628.334237895242,1090.78419464955,6.20949242058244,0.139423744278603,4.07836370070124,20.1677438849192,0,0,0,0,1.92354946143911,0,0,0,0,0,0,0,0,0,0,0,0,48.2546666624863,3.98104772431402,2.91909962861019,5.49927130440263,540.261496456093,381.812571344694,458.934468076476,52.5728837249281,1.60515529459758,424.955704545765,0,0,4.85560759068186,73.3926989299866,9.67925728389311,91.821828489147,14.9120327923232,7.21552413189564,0.414752765588989,1.32930774541437,0,1.88359751044335,0,0.569219092059585,0.416024019039416,0,0,4.87531556850254,8.56160674385948,0,2.99944626996164,2.41194746384412,2.05288642633023,1.26085721434945,0.0882561266915003,98.5276029803122,8.63364125274531,0.19871461170299,998.221319836339,0.586654148204409,3.60714691131902,3.41524791582964,0.19980960958213,0,0,38.4372795210801,1.58460277786965,0.99402028452346,3.29971648463514,0,0.209205692624666,2.95794831145333,15.025430674879,300.210144354895,72.0122292971883,0,0,256.578057776611,2.51354161145029,1.3749625440701,3.58936512288407,0,0.429226048136571,0.669514372325618,1.61240333968143,0,0,0,0,0,5.61036644634068,0,980.518207534871,474.124056674395,0.321506296930038,0.687697182986169,1.66176135211674,0,0,774.556847389814,0,1.73372556058236,1.73100140845494,0,2.68931008999267,0.383830394638891,3.57347663186684,0.662091970365432,0,2.71499800876856,5.18532894720761,17.3091300857987,5.98650957812437,0,5.11164065356265,9.97146405377106,0.439656701034247,14.5757577803443,631.288675913451,249.258454284971,8.89651556998513,0,0.961086713109252,2.51526888159466,1.24271716604159,0,0,0,0,0,0,0,0,0,1275.05211097249,994.270006421196,893.738054313702,186.931397794963,274.660331605246,344.821325533502,9.68440444553616,0.624902039810533,0,8.56396000634902,4.9405822136616,63.225212283929,48.8383866418481,5.82093731258809,0.467426619694449,0,17.8038824958584,7.54703705257725,0,0,0,0,0,2.07085797312813,1.34940933649081,6.05525531817412,4.14706207840855,3.45594228925393,4.17396049449387,10.2175174118109,2.28483127301277,0.813741466409323,12.9112548033817,4.40383283874203,8.35260767781289,3.98095888698616,0,0,0.336749488765919,0,0.770479321629213,0.428883182749851,3.65392008751296,0,0,0,0,7.10243328470236,3.28926074368061,1.94358060540469,0,0,0,0,0.607719912354764,793.741681947086,0,0.930053882193542,0,8.19024622116032,32.6877968642447,0,129.991807305704,0,0,6.2426754892352,0,0,9.95323616052756,12.6615427590615,18.7615171830226,2.67352101155024,131.160775468609,0,11.0538958452875,31.2318125932686,5.58644917973244,0,0,152.108442174239,5.29013915536026,0.6124909547064,707.292226762212,1278.10311845678,687.064129381979,1302.07868020031,109.147044464004,948.491717546748,800.111824105822,17.1323304310985,0,0.235939446695481,0,0,0,1.3807198521202,0,6.39287790968687,9.68184329776896,3.90757005616546,0,0.327543835020193,0,1258.15766385607,1036.49063686058,1027.23337861088,1047.94626345431,77.6704228805872,0,1.98484471355718,0.351742488719241,0.127762427639595,302.135835435354,138.212609831937,111.68167117954,95.3904581761937,0,0.345701962667338,8.74588848130834,1474.26350826748,1202.06320963463,1.41832609060762,0,6.35794052089164,479.83101160347,0,21.0026505717184,3.67076905071656,24.3653360822396,49.9621043794828,27.6523820532272,0,5.73732298598512,24.0513409419076,0,0,0,1.29068207646083,0,0,162.157240223126,1.3746412112643,0.62041277132864,0,0,0,0,0.647428837187895,0.307988420568741,1.1598144313382,8.25708688200537,41.6412244962548,30.6384193748507,2.14056163399623,5.42141193787008,28.2547128035753,30.1925687133347,3.39566295674957,5.24542945209498,71.958546343313,0.980593287015622,69.5245813949796,295.247934540878,49.3097024542963,126.374062547437,0,0.0939839179798536,0.644578879735772,0,0.178553938605658,0,0,2.92134555298607,0,15.1939958140538,0.315543124386369,735.463949395124,69.8161104544604,28.0384225473162,0.743990036333503,0,0,0,0.327796715891087,0.126698501011437,0.305966489225945,0.26721740526556,1.8378979906969,0,5.22873017705852,8.30688803484153,244.60498464034,100.330005986038,1.91910583710883,1.42838658878244,0,1.11734485732544,0.112131862580613,0.190941474834495,2.02117188958219,0.217716747896961,0.684466602170562,0.606168477131288,1.43444410785353,2.66128285236811,0.89543595472072,1.60091018816573,15.4457825829552,0.0898252021065869,2.34640942403454,7.09000376260625,13.8344700627351,2.66302709674205,2.41528552309231,0 | |||
|short_description=p1@SNAP25 | |||
}} |
Revision as of 10:15, 21 January 2014
Short description: | p1@SNAP25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNAP25_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000254976, ENST00000304886, NM_003081, NM_130811, uc002wnq.1, uc002wnr.1, uc002wns.1, uc010gca.1, uc010gcb.1, uc010gcc.1_5end |
EntrezGene: | SNAP25 |
HGNC: | 11132 |
UniProt: | P60880 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data