FFCP PHASE1:Hg19::chr22:41734286..41734290,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C839 | |||
|description=CAGE_peak_at_chr22:41734286..41734290,+ | |||
|id=chr22:41734286..41734290,+ | |||
|ontology_enrichment_celltype=CL:0002586!7.95e-99!3;CL:0000149!2.01e-74!4;CL:0000147!5.39e-22!14;CL:0000325!2.13e-08!39 | |||
|ontology_enrichment_celltype_v019=CL:0002586;4.27e-34;3!CL:0000149;5.56e-26;4!CL:0000147;1.86e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,4.27e-34,3;CL:0000149,5.56e-26,4;CL:0000147,1.86e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.96e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!3.03e-105!5;UBERON:0005388!3.03e-105!5;UBERON:0001802!3.03e-105!5;UBERON:0001781!7.95e-99!3;UBERON:0001782!7.95e-99!3;UBERON:0005424!7.95e-99!3;UBERON:0000019!2.32e-28!19;UBERON:0000047!2.32e-28!19;UBERON:0004088!2.32e-28!19;UBERON:0003072!2.32e-28!19;UBERON:0003071!2.32e-28!19;UBERON:0004128!2.32e-28!19;UBERON:0007625!9.75e-28!11;UBERON:0000970!5.55e-27!20;UBERON:0002104!9.82e-26!21;UBERON:0001456!9.82e-26!21;UBERON:0000020!1.46e-23!23;UBERON:0001032!1.30e-22!24;UBERON:0004456!1.30e-22!24;UBERON:0005085!7.78e-19!29;UBERON:0001444!1.25e-11!48;UBERON:0005743!7.41e-10!86;UBERON:0003056!3.98e-09!61;UBERON:0000073!5.59e-09!94;UBERON:0001016!5.59e-09!94;UBERON:0000033!4.78e-07!123;UBERON:0000153!9.73e-07!129;UBERON:0007811!9.73e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.49e-79;5!UBERON:0005388;3.49e-79;5!UBERON:0001802;3.49e-79;5!UBERON:0001781;4.27e-34;3!UBERON:0001782;4.27e-34;3!UBERON:0000019;5.37e-22;19!UBERON:0000047;5.37e-22;19!UBERON:0004088;5.37e-22;19!UBERON:0010230;5.37e-22;19!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0001456;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24!UBERON:0007625;2.16e-10;11!UBERON:0001444;1.53e-08;48!UBERON:0000033;1.99e-08;50!UBERON:0000153;7.96e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,2.83e-66,6;UBERON:0005388,2.83e-66,6;UBERON:0001802,2.83e-66,6;UBERON:0001782,4.27e-34,3;UBERON:0005424,4.27e-34,3;UBERON:0001781,5.56e-26,4;UBERON:0000019,5.71e-21,20;UBERON:0000047,5.71e-21,20;UBERON:0010312,5.71e-21,20;UBERON:0004088,5.71e-21,20;UBERON:0010230,5.71e-21,20;UBERON:0003072,5.71e-21,20;UBERON:0004128,5.71e-21,20;UBERON:0003071,5.71e-21,20;UBERON:0000970,4.86e-20,21;UBERON:0002104,4.86e-20,21;UBERON:0001456,3.41e-19,22;UBERON:0000020,1.03e-17,24;UBERON:0001032,1.03e-17,24;UBERON:0004456,1.03e-17,24;UBERON:0005085,5.04e-14,31;UBERON:0007625,2.16e-10,11;UBERON:0001444,2.38e-09,49;UBERON:0000033,2.46e-08,56;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62;UBERON:0003056,1.20e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3080511260475,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50100742770978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr22:41734286..41734290,+ | |||
}} |
Revision as of 16:14, 21 January 2014
Short description: | p@chr22:41734286..41734290, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:41734286..41734290, + |
Coexpression cluster: | C839_Retinal_Mallassezderived_retina_medulla_mesothelioma_osteosarcoma_Saos2 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 4.27e-34 | 3 |
visual pigment cell | 5.56e-26 | 4 |
pigment cell | 1.86e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
retina | 2.83e-66 | 6 |
photoreceptor array | 2.83e-66 | 6 |
posterior segment of eyeball | 2.83e-66 | 6 |
pigmented layer of retina | 4.27e-34 | 3 |
presumptive retinal pigmented epithelium | 4.27e-34 | 3 |
layer of retina | 5.56e-26 | 4 |
camera-type eye | 5.71e-21 | 20 |
simple eye | 5.71e-21 | 20 |
immature eye | 5.71e-21 | 20 |
ocular region | 5.71e-21 | 20 |
eyeball of camera-type eye | 5.71e-21 | 20 |
optic cup | 5.71e-21 | 20 |
optic vesicle | 5.71e-21 | 20 |
eye primordium | 5.71e-21 | 20 |
eye | 4.86e-20 | 21 |
visual system | 4.86e-20 | 21 |
face | 3.41e-19 | 22 |
sense organ | 1.03e-17 | 24 |
sensory system | 1.03e-17 | 24 |
entire sense organ system | 1.03e-17 | 24 |
ectodermal placode | 5.04e-14 | 31 |
pigment epithelium of eye | 2.16e-10 | 11 |
subdivision of head | 2.38e-09 | 49 |
head | 2.46e-08 | 56 |
anterior region of body | 1.20e-07 | 62 |
craniocervical region | 1.20e-07 | 62 |
pre-chordal neural plate | 1.20e-07 | 61 |