FFCP PHASE1:Hg19::chr3:32544275..32544350,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54918 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19177 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000495177_5end | |||
|coexpression_cluster_id=C1246 | |||
|description=CAGE_peak_1_at_CMTM6_5end | |||
|id=chr3:32544275..32544350,- | |||
|ontology_enrichment_celltype=CL:0000738!1.55e-39!140;CL:0000766!3.53e-35!76;CL:0000557!1.94e-30!71;CL:0000037!2.67e-30!172;CL:0000566!2.67e-30!172;CL:0002009!1.52e-29!65;CL:0002087!2.18e-29!119;CL:0002031!4.47e-29!124;CL:0000988!6.43e-29!182;CL:0002032!1.88e-28!165;CL:0000837!1.88e-28!165;CL:0002194!2.29e-28!63;CL:0000576!2.29e-28!63;CL:0000040!2.29e-28!63;CL:0000559!2.29e-28!63;CL:0000839!3.02e-27!70;CL:0002057!7.12e-26!42;CL:0000763!3.94e-25!112;CL:0000049!3.94e-25!112;CL:0002320!2.34e-23!365;CL:0000134!7.61e-23!358;CL:0000860!8.08e-23!45;CL:0000048!1.45e-19!430;CL:0000034!6.44e-19!444;CL:0000723!8.02e-19!436;CL:0002371!2.60e-18!591;CL:0000219!1.69e-16!390;CL:0000144!2.67e-16!625;CL:0000003!1.72e-14!722;CL:0000063!3.73e-14!578;CL:0000012!1.08e-12!682;CL:0000548!7.47e-12!679;CL:0000004!7.47e-12!679;CL:0000255!7.47e-12!679;CL:0000451!9.81e-08!10;CL:0000990!7.07e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.80e-19;33!CL:0002057;2.80e-19;33!CL:0000473;1.18e-18;39!CL:0000234;1.18e-18;39!CL:0000576;2.09e-17;48!CL:0000766;3.58e-16;69!CL:0000738;3.19e-10;136!CL:0002087;6.64e-09;104!CL:0000451;9.72e-08;10!CL:0000763;2.80e-07;100!CL:0000990;7.03e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.00e-42,136;CL:0000766,1.18e-38,72;CL:0000557,1.01e-33,67;CL:0002009,5.45e-33,61;CL:0000037,5.70e-32,168;CL:0002194,8.58e-32,59;CL:0000576,8.58e-32,59;CL:0000040,8.58e-32,59;CL:0000559,8.58e-32,59;CL:0002087,1.58e-31,115;CL:0002031,3.90e-31,120;CL:0000988,1.03e-30,177;CL:0000839,2.69e-30,66;CL:0002032,4.22e-30,161;CL:0000837,4.22e-30,161;CL:0000473,8.44e-29,48;CL:0000234,8.44e-29,48;CL:0000763,3.95e-27,108;CL:0000049,3.95e-27,108;CL:0000860,7.12e-26,42;CL:0002057,7.12e-26,42;CL:0002320,3.33e-24,361;CL:0000134,1.09e-23,354;CL:0000048,4.34e-20,427;CL:0000034,2.00e-19,441;CL:0000723,2.48e-19,433;CL:0000219,3.63e-17,386;CL:0000451,9.81e-08,10;CL:0000990,7.07e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.88e-19;42!CL:0000049;7.06e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.41e-36!112;UBERON:0002390!2.48e-36!102;UBERON:0003061!2.48e-36!102;UBERON:0002371!1.61e-27!80;UBERON:0002405!1.06e-26!115;UBERON:0004765!2.20e-26!101;UBERON:0001434!2.20e-26!101;UBERON:0001474!3.85e-25!86;UBERON:0002384!1.38e-22!375;UBERON:0002204!2.76e-14!167;UBERON:0003081!1.57e-12!216;UBERON:0000178!7.33e-09!15;UBERON:0000179!7.33e-09!15;UBERON:0000463!7.33e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.44e-09;15!UBERON:0000179;7.44e-09;15!UBERON:0000463;7.44e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.80e-39,98;UBERON:0003061,3.80e-39,98;UBERON:0002193,5.80e-39,108;UBERON:0002405,6.80e-31,93;UBERON:0002371,2.76e-30,76;UBERON:0004765,5.89e-30,90;UBERON:0001434,2.71e-29,100;UBERON:0001474,1.40e-27,82;UBERON:0002384,2.10e-23,371;UBERON:0002204,1.17e-15,167;UBERON:0003081,1.64e-13,203;UBERON:0000926,1.43e-10,315;UBERON:0004120,1.43e-10,315;UBERON:0006603,1.43e-10,315;UBERON:0000178,7.33e-09,15;UBERON:0000179,7.33e-09,15;UBERON:0000463,7.33e-09,15 | |||
|phase1_expression=93.9277220828778,57.8071414505654,73.155335725809,62.0454449789409,31.7342377043374,45.3616032532192,15.1979926900986,41.6935116461708,26.3797484481837,32.4368796181992,8.37361401566913,38.8825642391707,31.9158043656429,82.180858365471,61.6399118853923,47.735085398076,62.0775363864696,46.7398457847919,61.9674654463944,22.038669395745,17.3400587557615,16.2996455168606,29.4823066744988,26.6905128892124,29.7536055839683,73.0512158950414,84.2352047756443,78.9469136576203,159.312532123806,137.410924518802,173.858506483953,25.74379428541,14.7590900201343,30.3198288336766,43.8464355284507,38.8122004690661,61.3624918209831,146.808783260948,126.343001906189,119.79000063515,114.420807336601,91.6619074833712,111.015069650334,218.388154646906,168.532670885209,173.447603749289,238.704620902138,198.18292202652,207.812974870615,248.278534574016,184.691869407482,243.103732325466,300.962979283068,213.655430266246,250.539000199532,261.280367285135,210.956453994715,262.027582862969,339.753120531702,297.180279072463,283.865683854774,169.213716995785,196.272239099686,184.555316980657,347.090249399786,255.890736335704,308.29701325281,225.872550065812,174.696777670767,212.193501276899,273.035175687649,280.259280986537,350.323862897059,160.342762310764,164.130519573014,152.002517993573,124.460123310317,136.060264914405,117.008227115474,165.022378626183,180.616342896774,176.453572536636,91.5180471198878,82.4669303005819,74.7187773245386,80.2252818425033,72.8720696405543,70.6945501144014,85.2747885892472,70.5999778356169,95.0585658412779,120.970861010413,113.152875525068,85.9113635763668,70.063570372692,55.3106578027662,59.7997701146053,52.2704314456389,50.9891717518783,127.396109487697,24.1182477308857,35.508585430105,13.6378709885538,140.042944304663,48.0207629183985,54.0542702784036,41.1621872922824,266.045671070227,265.060950327032,53.7711948054021,51.9538033437395,48.9767214892239,24.615569484902,26.7540828089713,31.360657141493,67.5323682477494,47.1361207130363,45.3588228037071,43.772406719374,49.6962046345591,41.0182575929544,46.5721501779703,39.1495309602209,37.5000770682446,64.9639778072198,51.1438864415076,57.4789597844733,49.7968655765089,47.0694744578973,44.6059163959021,14.6284119788377,60.3630773733273,47.9484606913239,41.2040633718406,40.6083707615071,58.9525332170553,62.8275898170368,26.764917866645,45.4712470559166,41.0199385305743,47.3429494885949,44.0744589049803,18.5790597029197,25.5841265521256,261.585199285675,247.612486439558,240.919824460184,107.082290313099,122.406910906947,94.3502053377095,36.7710453628404,28.3877416385021,29.1598021350379,39.0062479927567,36.9159503864717,34.3897552425084,36.7831141104787,70.5477752532268,78.624344053763,77.6551821614035,30.6150281002952,32.691700545896,38.3177430350626,44.1195696415042,22.6839745406893,73.0471777363773,34.352994011804,41.7788592593125,19.9311628705648,22.7823758296351,42.8692080797153,545.570928185302,593.303804146938,37.0679944321154,47.2123354110553,65.7212355539169,24.3632892696323,44.1728395953173,51.4269154187618,30.8372680078269,27.7547388897233,32.8067839394823,79.9812360977399,78.2669004724888,66.3655326640642,44.3477262999649,51.8558332031999,21.0889288650417,44.9510510635662,15.4027391817001,62.0212024289974,28.7714521677224,30.1083676524725,28.7924153739609,54.3050095538016,35.8676206550362,52.1795194937616,66.528160007795,57.3659275926252,24.5743567723267,14.3723628363248,46.2924313373682,36.7848448423575,77.8550164510554,42.1418516045604,49.6510229194412,48.827369144644,69.1936317276128,29.9580691600399,49.1181994282705,47.2608139585823,37.5113870105503,42.1484844585215,15.4584324027377,54.3461220488242,37.8058984220436,54.5647228902712,15.6508940031351,51.8240929356145,36.3703627842327,40.1160839543774,46.7489735776251,48.324768808489,82.715645153891,85.9150279861129,92.3510797152592,33.2988217733795,31.409555092192,37.646837489724,32.4459102198109,28.0076144471948,31.3880528805214,25.0319251727706,21.8701918985581,24.8642858434465,67.333349564637,62.0816354235844,14.6700432049406,11.8009283054671,16.1477390021933,13.5661586460845,11.9833694250823,15.1853196231102,14.1572873568173,12.9506166982728,16.5441277486948,33.9551509127338,16.8290128564135,31.2796248611864,16.1709582524096,100.136477509246,119.90492043467,83.301376842078,26.9292490642937,56.5746817298322,58.5046233117972,48.8388770068384,15.7362454560667,58.6083909159808,53.8864750822642,24.4356228982744,13.5191522086345,38.9694623468238,44.1694842955043,44.8501211980839,52.2606540895087,43.983623694778,67.730478195517,27.6571539285746,26.613071024941,148.222637664613,280.103105371668,155.46819575401,96.5458490063803,76.4318683304811,68.3355968708303,72.00505225309,61.033127087932,35.6545891623646,443.889577344245,150.210628426564,57.0152317737123,62.2598198761273,57.5665496424293,39.8766776154822,23.3012939590549,8.20522130470329,18.8179690624976,37.5320348367131,53.1607212383734,34.2991719156694,31.0603103636649,23.9778037858304,49.7233577866041,58.5600872382733,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| |||
|short_description=p1@CMTM6 | |||
}} |
Revision as of 18:03, 21 January 2014
Short description: | p1@CMTM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CMTM6_5end |
Coexpression cluster: | C1246_Neutrophils_Eosinophils_CD14_migratory_Macrophage_Dendritic_Mast |
Association with transcript: | 0bp_to_ENST00000495177_5end |
EntrezGene: | CMTM6 |
HGNC: | 19177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.00e-42 | 136 |
myeloid leukocyte | 1.18e-38 | 72 |
granulocyte monocyte progenitor cell | 1.01e-33 | 67 |
macrophage dendritic cell progenitor | 5.45e-33 | 61 |
hematopoietic stem cell | 5.70e-32 | 168 |
monopoietic cell | 8.58e-32 | 59 |
monocyte | 8.58e-32 | 59 |
monoblast | 8.58e-32 | 59 |
promonocyte | 8.58e-32 | 59 |
nongranular leukocyte | 1.58e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 3.90e-31 | 120 |
hematopoietic cell | 1.03e-30 | 177 |
myeloid lineage restricted progenitor cell | 2.69e-30 | 66 |
hematopoietic oligopotent progenitor cell | 4.22e-30 | 161 |
hematopoietic multipotent progenitor cell | 4.22e-30 | 161 |
defensive cell | 8.44e-29 | 48 |
phagocyte | 8.44e-29 | 48 |
myeloid cell | 3.95e-27 | 108 |
common myeloid progenitor | 3.95e-27 | 108 |
classical monocyte | 7.12e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.12e-26 | 42 |
connective tissue cell | 3.33e-24 | 361 |
mesenchymal cell | 1.09e-23 | 354 |
multi fate stem cell | 4.34e-20 | 427 |
stem cell | 2.00e-19 | 441 |
somatic stem cell | 2.48e-19 | 433 |
motile cell | 3.63e-17 | 386 |
dendritic cell | 9.81e-08 | 10 |
conventional dendritic cell | 7.07e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.80e-39 | 98 |
blood island | 3.80e-39 | 98 |
hemolymphoid system | 5.80e-39 | 108 |
immune system | 6.80e-31 | 93 |
bone marrow | 2.76e-30 | 76 |
skeletal element | 5.89e-30 | 90 |
skeletal system | 2.71e-29 | 100 |
bone element | 1.40e-27 | 82 |
connective tissue | 2.10e-23 | 371 |
musculoskeletal system | 1.17e-15 | 167 |
lateral plate mesoderm | 1.64e-13 | 203 |
mesoderm | 1.43e-10 | 315 |
mesoderm-derived structure | 1.43e-10 | 315 |
presumptive mesoderm | 1.43e-10 | 315 |
blood | 7.33e-09 | 15 |
haemolymphatic fluid | 7.33e-09 | 15 |
organism substance | 7.33e-09 | 15 |