FFCP PHASE1:Hg19::chr3:50191610..50191612,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:50191610..50191612,- | |||
|id=chr3:50191610..50191612,- | |||
|ontology_enrichment_celltype=CL:0000064!5.69e-09!3;CL:0005012!5.69e-09!3;CL:0000067!5.69e-09!3;CL:0002304!5.69e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;4.68e-66;3!CL:0000067;4.68e-66;3!CL:0005012;4.68e-66;3!CL:0002304;4.68e-66;3!CL:0000710;6.00e-11;20!CL:0000075;2.22e-08;27!CL:0002077;3.69e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.68e-66,3;CL:0000067,4.68e-66,3;CL:0005012,4.68e-66,3;CL:0002304,4.68e-66,3;CL:0000710,6.00e-11,20;CL:0000075,2.22e-08,27;CL:0002077,7.37e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.46e-50;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!5.34e-11!4;UBERON:0002203!5.56e-11!6;UBERON:0001768!5.56e-11!6;UBERON:0001778!5.69e-09!3;UBERON:0001775!5.69e-09!3;UBERON:0002200!3.87e-08!11;UBERON:0006876!3.87e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;4.68e-66;3!UBERON:0001775;4.68e-66;3!UBERON:0000488;6.60e-50;4!UBERON:0002203;9.87e-34;6!UBERON:0001768;9.87e-34;6!UBERON:0002200;9.87e-34;6!UBERON:0007625;5.63e-19;11!UBERON:0006876;5.63e-19;11!UBERON:0001801;3.66e-15;14!UBERON:0000019;1.81e-11;19!UBERON:0000047;1.81e-11;19!UBERON:0004088;1.81e-11;19!UBERON:0010230;1.81e-11;19!UBERON:0000945;3.26e-11;5!UBERON:0010039;3.26e-11;5!UBERON:0000970;6.00e-11;20!UBERON:0002104;1.77e-10;21!UBERON:0001456;1.77e-10;21!UBERON:0000020;1.17e-09;23!UBERON:0001032;2.67e-09;24!UBERON:0004456;2.67e-09;24!UBERON:0010371;3.69e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,4.68e-66,3;UBERON:0001775,4.68e-66,3;UBERON:0000488,6.60e-50,4;UBERON:0002203,9.87e-34,6;UBERON:0001768,9.87e-34,6;UBERON:0002200,9.87e-34,6;UBERON:0007625,5.63e-19,11;UBERON:0006876,5.63e-19,11;UBERON:0001801,3.66e-15,14;UBERON:0000019,6.00e-11,20;UBERON:0000047,6.00e-11,20;UBERON:0010312,6.00e-11,20;UBERON:0004088,6.00e-11,20;UBERON:0010230,6.00e-11,20;UBERON:0003072,6.00e-11,20;UBERON:0004128,6.00e-11,20;UBERON:0003071,6.00e-11,20;UBERON:0000970,1.77e-10,21;UBERON:0002104,1.77e-10,21;UBERON:0001456,4.74e-10,22;UBERON:0000020,2.67e-09,24;UBERON:0001032,2.67e-09,24;UBERON:0004456,2.67e-09,24;UBERON:0000945,1.69e-07,8;UBERON:0010039,1.69e-07,8;UBERON:0005085,1.99e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.472674085820339,1.55210578223795,1.14185221401064,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.339121184620975,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.290033387828457,0.0852266274161009,0,0,0,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0.554698692052555,0,0,0,0.17472666824203,0.171986032471617,0,0.0730893170861856,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,1.46067277649303,0,0,0.315543124386369,0,0.872701380680755,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0.829169439458779,0,0,0.476128862927481,0,0,0.224263725161227,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr3:50191610..50191612,- | |||
}} |
Revision as of 18:58, 21 January 2014
Short description: | p@chr3:50191610..50191612, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:50191610..50191612, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.68e-66 | 3 |
ciliated epithelial cell | 4.68e-66 | 3 |
multi-ciliated epithelial cell | 4.68e-66 | 3 |
non-pigmented ciliary epithelial cell | 4.68e-66 | 3 |
neurecto-epithelial cell | 6.00e-11 | 20 |
columnar/cuboidal epithelial cell | 2.22e-08 | 27 |
ecto-epithelial cell | 7.37e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 4.68e-66 | 3 |
ciliary body | 4.68e-66 | 3 |
atypical epithelium | 6.60e-50 | 4 |
vasculature of eye | 9.87e-34 | 6 |
uvea | 9.87e-34 | 6 |
vasculature of head | 9.87e-34 | 6 |
pigment epithelium of eye | 5.63e-19 | 11 |
vasculature of organ | 5.63e-19 | 11 |
anterior segment of eyeball | 3.66e-15 | 14 |
camera-type eye | 6.00e-11 | 20 |
simple eye | 6.00e-11 | 20 |
immature eye | 6.00e-11 | 20 |
ocular region | 6.00e-11 | 20 |
eyeball of camera-type eye | 6.00e-11 | 20 |
optic cup | 6.00e-11 | 20 |
optic vesicle | 6.00e-11 | 20 |
eye primordium | 6.00e-11 | 20 |
eye | 1.77e-10 | 21 |
visual system | 1.77e-10 | 21 |
face | 4.74e-10 | 22 |
sense organ | 2.67e-09 | 24 |
sensory system | 2.67e-09 | 24 |
entire sense organ system | 2.67e-09 | 24 |
stomach | 1.69e-07 | 8 |
food storage organ | 1.69e-07 | 8 |
ectodermal placode | 1.99e-07 | 31 |