FFCP PHASE1:Hg19::chr3:100567644..100567686,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C404 | |||
|description=CAGE_peak_at_chr3:100567644..100567686,+ | |||
|id=chr3:100567644..100567686,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.22e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.18e-11;9!CL:0000447;2.18e-11;9!CL:0000327;3.94e-10;15!CL:0000214;2.61e-09;3!CL:0000511;1.58e-07;1!CL:0002625;1.58e-07;1!CL:0000216;1.58e-07;1!CL:0000569;3.97e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.12e-11,9;CL:0000447,2.12e-11,9;CL:0000327,3.48e-10,15;CL:0000214,2.51e-09,3;CL:0000511,1.74e-07,1;CL:0002625,1.74e-07,1;CL:0000216,1.74e-07,1;CL:0000151,1.86e-07,36;CL:0000569,3.85e-07,4;CL:0000011,3.85e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.03e-07;1!UBERON:0003852;2.03e-07;1!CL:0000011;3.97e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;3.09e-18;3!DOID:3193;1.54e-12;2!DOID:962;1.54e-12;2!DOID:3369;2.03e-07;1!DOID:1115;4.15e-07;20!DOID:2513;4.20e-07;1!DOID:4235;4.20e-07;1!DOID:3571;4.20e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,4.04e-18,3;DOID:3193,2.07e-12,2;DOID:962,2.07e-12,2;DOID:3369,1.97e-07,1;DOID:2513,2.52e-07,1;DOID:3571,3.02e-07,1;DOID:1115,4.48e-07,20;DOID:4235,4.89e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.61e-09;3!UBERON:0007616;2.61e-09;3!UBERON:0002217;2.61e-09;3!UBERON:0002018;2.61e-09;3!UBERON:0001136;1.58e-07;1!UBERON:0001343;1.58e-07;1!UBERON:0004910;1.58e-07;1!UBERON:0004813;1.58e-07;1!UBERON:0005705;2.03e-07;1!UBERON:0008193;2.03e-07;1!UBERON:0010912;2.03e-07;1!UBERON:0002514;2.03e-07;1!UBERON:0003457;2.03e-07;1!UBERON:0008907;2.03e-07;1!UBERON:0008001;2.03e-07;1!UBERON:0007213;2.03e-07;1!UBERON:0009891;2.03e-07;1!UBERON:0007914;2.03e-07;1!UBERON:0007375;2.03e-07;1!UBERON:0003323;2.03e-07;1!UBERON:0010258;2.03e-07;1!UBERON:0005253;2.03e-07;1!UBERON:0007842;2.03e-07;1!UBERON:0002397;2.03e-07;1!UBERON:0003113;2.03e-07;1!UBERON:0003277;2.03e-07;1!UBERON:0001709;2.03e-07;1!UBERON:0002244;2.03e-07;1!UBERON:0005620;2.03e-07;1!UBERON:0010364;2.03e-07;1!UBERON:0004288;2.03e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.51e-09,3;UBERON:0007616,2.51e-09,3;UBERON:0002217,2.51e-09,3;UBERON:0002018,2.51e-09,3;UBERON:0001136,1.74e-07,1;UBERON:0001343,1.74e-07,1;UBERON:0004910,1.74e-07,1;UBERON:0005154,1.74e-07,1;UBERON:0005295,1.74e-07,1;UBERON:0004813,1.74e-07,1;UBERON:0005297,1.74e-07,1;UBERON:0005294,1.74e-07,1;UBERON:0010141,1.74e-07,1;UBERON:0005891,1.74e-07,1;UBERON:0005705,2.23e-07,1;UBERON:0008193,2.23e-07,1;UBERON:0010912,2.23e-07,1;UBERON:0002514,2.23e-07,1;UBERON:0003457,2.23e-07,1;UBERON:0008907,2.23e-07,1;UBERON:0008001,2.23e-07,1;UBERON:0007213,2.23e-07,1;UBERON:0009891,2.23e-07,1;UBERON:0007914,2.23e-07,1;UBERON:0009292,2.23e-07,1;UBERON:0003099,2.23e-07,1;UBERON:0007375,2.23e-07,1;UBERON:0003323,2.23e-07,1;UBERON:0010258,2.23e-07,1;UBERON:0007842,2.23e-07,1;UBERON:0009494,2.23e-07,1;UBERON:0010042,2.23e-07,1;UBERON:0010045,2.23e-07,1;UBERON:0010259,2.23e-07,1;UBERON:0010359,2.23e-07,1;UBERON:0009526,2.23e-07,1;UBERON:0002397,2.23e-07,1;UBERON:0003113,2.23e-07,1;UBERON:0003277,2.23e-07,1;UBERON:0001709,2.23e-07,1;UBERON:0004066,2.23e-07,1;UBERON:0002244,2.23e-07,1;UBERON:0005620,2.23e-07,1;UBERON:0004362,2.23e-07,1;UBERON:0010364,2.23e-07,1;UBERON:0010046,2.23e-07,1;UBERON:0005868,2.23e-07,1;UBERON:0007238,2.23e-07,1;UBERON:0004288,2.23e-07,1;UBERON:0004068,2.23e-07,1;UBERON:0010334,2.23e-07,1;UBERON:0003852,2.23e-07,1;UBERON:0010253,2.23e-07,1 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.31310050484502,0,5.64901423947212,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,1.67799774483962,0.275118041940067,0,0,0,0,0.805658634218294,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0,4.36950296683622,0.860509862246441,0,0,0,1.2333377420858,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0.896692083310806,0.23486899728753,0,0.421352420106746,0.61246251376468,0,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0,1.03056216018252,0,0.168776332241266,0,0,0,0.161646056818812,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0,0.433099343283221,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,1.01346914667305,0.205476322550383,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.415941723061614,3.39015078714607,1.89242898040722,0.937131319941706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.512556597022804,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0.386682873168488,0,0,0.413509717453592,0.107420244868274,0.145016693914229,0,0.267096106940212,0,0,0,0,0,4.40737285562896,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,2.19342140668156,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0,0,0,3.37772216476263,6.91519275215794,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0,0,0.20453736500431,0,1.86623752597084,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.687481272035051,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,1.19271615249795,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.467426619694449,0,0.757612021100357,1.76097531226803,0.889811221596536,6.17868184671694,2.7221566277383,0.310874401165561,0.295710299979268,0.477890301491107,0,0,0.414706207840855,0.797525143673985,0,0.150257608997218,0.380805212168795,0.406870733204662,0,0.322231671127465,0.464033759878494,0,0.800055529326307,0.686791410365586,0.336749488765919,0,0,0,0,0.680117776536817,0,0,3.22359913946677,0,0,1.41351316756705,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,1.11728983594649,1.27201740261367,0,0,2.1160556621441,0,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0.49131575253029,0,0.0675375846183947,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.266107110487916,0,0.171488009437418,0,0,0,0,0.156986185701028,0,0,0,0,0,1.07214816264985,0,0,0,0,0.207216164163037,0.85359238546975,0.691259661814092,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0,0,1.18948980281472,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0.5290268405154,0,0.924351257262837,0.865253124247578,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.476128862927481,0,0,1.12131862580613,0,0.404234377916439,0,0.684466602170562,0.134704106029175,0.143444410785353,1.33064142618405,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:100567644..100567686,+ | |||
}} |
Revision as of 20:13, 21 January 2014
Short description: | p@chr3:100567644..100567686, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:100567644..100567686, + |
Coexpression cluster: | C404_Fibroblast_mesenchymal_Synoviocyte_Smooth_basal_mesodermal_Chondrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.12e-11 | 9 |
carbohydrate secreting cell | 2.12e-11 | 9 |
extracellular matrix secreting cell | 3.48e-10 | 15 |
synovial cell | 2.51e-09 | 3 |
androgen binding protein secreting cell | 1.74e-07 | 1 |
seminiferous tubule epithelial cell | 1.74e-07 | 1 |
Sertoli cell | 1.74e-07 | 1 |
secretory cell | 1.86e-07 | 36 |
cardiac mesenchymal cell | 3.85e-07 | 4 |
migratory trunk neural crest cell | 3.85e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 4.04e-18 | 3 |
peripheral nerve sheath neoplasm | 2.07e-12 | 2 |
neurofibroma | 2.07e-12 | 2 |
peripheral primitive neuroectodermal tumor | 1.97e-07 | 1 |
basal cell carcinoma | 2.52e-07 | 1 |
liver cancer | 3.02e-07 | 1 |
sarcoma | 4.48e-07 | 20 |
spindle cell sarcoma | 4.89e-07 | 1 |