FFCP PHASE1:Hg19::chr3:148599249..148599271,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1359 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2298 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000477926_5end | |||
|description=CAGE_peak_2_at_CPA3_5end | |||
|id=chr3:148599249..148599271,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.86e-26!24;CL:0000071!5.51e-23!18;CL:0002546!5.51e-23!18;CL:0000213!7.00e-22!57;CL:0000215!7.00e-22!57;CL:0000222!2.46e-18!119;CL:0000115!2.56e-18!35;CL:0002078!1.99e-16!44;CL:1000413!9.38e-15!9;CL:0000076!1.06e-13!62;CL:0002543!7.70e-12!6;CL:0000220!2.96e-09!246;CL:0002544!3.91e-09!6;CL:0002321!4.51e-09!248;CL:0000144!5.96e-08!625;CL:0000548!6.48e-08!679;CL:0000004!6.48e-08!679;CL:0000255!6.48e-08!679;CL:0000012!9.18e-08!682;CL:0002590!4.94e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.30e-44;24!CL:0000071;5.90e-40;18!CL:1000413;2.18e-32;9!CL:0000115;7.39e-30;36!CL:0002544;1.85e-19;6!CL:0000213;2.07e-19;58!CL:0000215;2.07e-19;58!CL:0002078;4.90e-19;45!CL:0002543;7.06e-18;6!CL:0000076;8.24e-13;63!CL:0002561;2.06e-10;2!CL:0002590;3.32e-07;3!CL:0002138;3.34e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.72e-44,24;CL:0000071,4.53e-40,18;CL:0002546,4.53e-40,18;CL:0000213,7.75e-33,58;CL:0000215,7.75e-33,58;CL:1000413,2.34e-32,9;CL:0000115,2.81e-32,36;CL:0002078,3.51e-28,45;CL:0000076,1.58e-24,63;CL:0002544,2.00e-19,6;CL:0000222,2.32e-19,121;CL:0002543,4.93e-18,6;CL:0002321,2.53e-11,250;CL:0000066,3.21e-11,253;CL:0002561,2.12e-10,2;CL:0002590,3.37e-07,3;CL:0005020,4.87e-07,6;CL:0002138,4.87e-07,6;CL:0005022,4.87e-07,6;CL:0000064,7.17e-07,3;CL:0000067,7.17e-07,3;CL:0005012,7.17e-07,3;CL:0002304,7.17e-07,3;CL:0002618,9.92e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;5.90e-40;18!CL:0005022;3.34e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.51e-23!18;UBERON:0004638!5.51e-23!18;UBERON:0004852!5.51e-23!18;UBERON:0000487!5.72e-18!22;UBERON:0006914!2.91e-17!25;UBERON:0002049!2.03e-15!79;UBERON:0007798!2.03e-15!79;UBERON:0003915!9.38e-15!9;UBERON:0004700!9.38e-15!9;UBERON:0001917!9.38e-15!9;UBERON:0002200!1.54e-10!11;UBERON:0006876!1.54e-10!11;UBERON:0001638!5.39e-10!9;UBERON:0003920!5.39e-10!9;UBERON:0004582!5.39e-10!9;UBERON:0004535!2.29e-09!110;UBERON:0000055!5.90e-09!69;UBERON:0001009!6.76e-09!113;UBERON:0000488!1.30e-08!4;UBERON:0000490!1.36e-07!138;UBERON:0001981!4.72e-07!60;UBERON:0007500!4.72e-07!60;UBERON:0004537!4.72e-07!60;UBERON:0006965!4.72e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.90e-40;18!UBERON:0001986;5.90e-40;18!UBERON:0004852;5.90e-40;18!UBERON:0003915;2.18e-32;9!UBERON:0004700;2.18e-32;9!UBERON:0001917;2.18e-32;9!UBERON:0000487;3.62e-32;22!UBERON:0006914;5.81e-28;25!UBERON:0000490;1.35e-22;33!UBERON:0001638;7.49e-12;9!UBERON:0003920;7.49e-12;9!UBERON:0004582;7.49e-12;9!UBERON:0000488;9.71e-11;4!UBERON:0005933;2.06e-10;2!UBERON:0005942;2.06e-10;2!UBERON:0005932;2.06e-10;2!UBERON:0006876;3.13e-10;11!UBERON:0002049;6.51e-10;75!UBERON:0007798;6.51e-10;75!UBERON:0000055;2.96e-08;65!UBERON:0001801;6.33e-08;14!UBERON:0002203;2.66e-07;6!UBERON:0001768;2.66e-07;6!UBERON:0002200;2.66e-07;6!UBERON:0007500;6.29e-07;56!UBERON:0001981;6.29e-07;56!UBERON:0004537;6.29e-07;56!UBERON:0007625;9.94e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.53e-40,18;UBERON:0001986,4.53e-40,18;UBERON:0004852,4.53e-40,18;UBERON:0003915,2.34e-32,9;UBERON:0004700,2.34e-32,9;UBERON:0001917,2.34e-32,9;UBERON:0000487,2.92e-32,22;UBERON:0006914,4.82e-28,25;UBERON:0002049,1.17e-20,78;UBERON:0007798,1.17e-20,78;UBERON:0004535,2.19e-13,109;UBERON:0000055,2.56e-13,68;UBERON:0001009,6.72e-13,112;UBERON:0001638,5.93e-12,9;UBERON:0003920,5.93e-12,9;UBERON:0004582,5.93e-12,9;UBERON:0000488,6.08e-11,4;UBERON:0005933,2.12e-10,2;UBERON:0005942,2.12e-10,2;UBERON:0005932,2.12e-10,2;UBERON:0006876,2.40e-10,11;UBERON:0007500,2.95e-10,59;UBERON:0001981,2.95e-10,59;UBERON:0004537,2.95e-10,59;UBERON:0006965,2.95e-10,59;UBERON:0001801,5.21e-08,14;UBERON:0000490,1.34e-07,148;UBERON:0002203,1.96e-07,6;UBERON:0001768,1.96e-07,6;UBERON:0002200,1.96e-07,6;UBERON:0001778,7.17e-07,3;UBERON:0001775,7.17e-07,3;UBERON:0007625,7.96e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79616152611729,1.77383517970051,0.527008714158756,0,0,0,0,0,0,0,0,0,4.17401055470081,5.16140757063675,3.81854551768354,1.13061588384802,7.1314904155684,4.40188867104108,3.34391946458897,1.03366703667732,1.06729878806013,3.01248551488203,0,0.760272105718513,0,0,12.9622711661082,1.3394959242612,0.673588117878509,1.35133776579987,1.53316637465883,1.89853131913626,1.09921046358244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.937285727335186,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.140450806702248,1.02077085627447,0,0.723280468230358,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0.85422955527427,0,0,0.206105058476878,0,1.11670113798954,0,0,0,0.368199594569197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3218396401599,5.77503585335668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.122500807613,0,0,0,0,3.25808305310325,0,2.88662684050547,0,0.821860859650752,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.44024217006613,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0.207970861530807,0.892144943985809,0.630809660135739,0.35142424497814,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680374821106063,1.94324324491925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0,2.60510858551767,5.37845022021834,0.953150969619124,0.255897791311334,0,0,0,0.359744915166629,1.92175920815238,0.942499218765491,0,0,0,0,0,0,0.545999645631943,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00177834520615,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02547850262301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0.889811221596536,0,0,0,0,0,0,0.310525913752519,0,0,0,0.150257608997218,1.52322084867518,0.406870733204662,0,0.429642228169954,0.928067519756987,0.796191777397232,0.400027764663154,0,0,0,0,0,0,12.9222377541995,0.926089897295336,4.89473409012935,1.79088841081487,0,0,0,0,0,0,24.8709846046463,3.3424595179512,0,0,0,0,1.63804924423206,0.245772908753719,0,0,0,0,29.5108295854755,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.982631505060581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91542842709595,0,0,0,0,0,0,0,0,3.62872975984233,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CPA3 | |||
}} |
Revision as of 21:53, 21 January 2014
Short description: | p2@CPA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CPA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000477926_5end |
EntrezGene: | CPA3 |
HGNC: | 2298 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.72e-44 | 24 |
blood vessel endothelial cell | 4.53e-40 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.53e-40 | 18 |
lining cell | 7.75e-33 | 58 |
barrier cell | 7.75e-33 | 58 |
endothelial cell of artery | 2.34e-32 | 9 |
endothelial cell | 2.81e-32 | 36 |
meso-epithelial cell | 3.51e-28 | 45 |
squamous epithelial cell | 1.58e-24 | 63 |
aortic endothelial cell | 2.00e-19 | 6 |
mesodermal cell | 2.32e-19 | 121 |
vein endothelial cell | 4.93e-18 | 6 |
embryonic cell | 2.53e-11 | 250 |
epithelial cell | 3.21e-11 | 253 |
outer root sheath cell | 2.12e-10 | 2 |
smooth muscle cell of the brain vasculature | 3.37e-07 | 3 |
lymphangioblast | 4.87e-07 | 6 |
endothelial cell of lymphatic vessel | 4.87e-07 | 6 |
vascular lymphangioblast | 4.87e-07 | 6 |
ciliated cell | 7.17e-07 | 3 |
ciliated epithelial cell | 7.17e-07 | 3 |
multi-ciliated epithelial cell | 7.17e-07 | 3 |
non-pigmented ciliary epithelial cell | 7.17e-07 | 3 |
endothelial cell of umbilical vein | 9.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.53e-40 | 18 |
endothelium | 4.53e-40 | 18 |
cardiovascular system endothelium | 4.53e-40 | 18 |
endothelial tube | 2.34e-32 | 9 |
arterial system endothelium | 2.34e-32 | 9 |
endothelium of artery | 2.34e-32 | 9 |
simple squamous epithelium | 2.92e-32 | 22 |
squamous epithelium | 4.82e-28 | 25 |
vasculature | 1.17e-20 | 78 |
vascular system | 1.17e-20 | 78 |
cardiovascular system | 2.19e-13 | 109 |
vessel | 2.56e-13 | 68 |
circulatory system | 6.72e-13 | 112 |
vein | 5.93e-12 | 9 |
venous blood vessel | 5.93e-12 | 9 |
venous system | 5.93e-12 | 9 |
atypical epithelium | 6.08e-11 | 4 |
hair root sheath | 2.12e-10 | 2 |
hair outer root sheath | 2.12e-10 | 2 |
bulb of hair follicle | 2.12e-10 | 2 |
vasculature of organ | 2.40e-10 | 11 |
epithelial tube open at both ends | 2.95e-10 | 59 |
blood vessel | 2.95e-10 | 59 |
blood vasculature | 2.95e-10 | 59 |
vascular cord | 2.95e-10 | 59 |
anterior segment of eyeball | 5.21e-08 | 14 |
unilaminar epithelium | 1.34e-07 | 148 |
vasculature of eye | 1.96e-07 | 6 |
uvea | 1.96e-07 | 6 |
vasculature of head | 1.96e-07 | 6 |
ciliary epithelium | 7.17e-07 | 3 |
ciliary body | 7.17e-07 | 3 |
pigment epithelium of eye | 7.96e-07 | 11 |