FFCP PHASE1:Hg19::chr4:55096960..55096991,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:55096960..55096991,- | |||
|id=chr4:55096960..55096991,- | |||
|ontology_enrichment_celltype=CL:0000057!9.70e-16!75;CL:0000055!1.09e-12!180;CL:0002620!6.49e-10!23;CL:0000136!2.84e-09!15;CL:0002334!3.93e-09!12;CL:0000499!4.30e-07!27;CL:0000135!4.88e-07!3;CL:0000386!4.88e-07!3;CL:0000388!4.88e-07!3;CL:0002579!8.08e-07!3;CL:0002615!8.39e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.08e-16;3!CL:0000388;1.08e-16;3!CL:0002579;1.88e-16;3!CL:0002616;1.93e-13;1!CL:0002581;5.70e-13;1!CL:0002334;2.64e-09;12!CL:0002570;7.65e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,7.30e-17,3;CL:0000388,7.30e-17,3;CL:0002579,2.38e-16,3;CL:0002616,2.06e-13,1;CL:0002581,4.23e-13,1;CL:0002334,2.68e-09,12;CL:0002570,6.61e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.61e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!5.58e-12!6;UBERON:0002358!5.58e-12!6;UBERON:0003684!5.58e-12!6;UBERON:0001178!5.58e-12!6;UBERON:0004457!1.50e-09!12;UBERON:0000042!1.50e-09!12;UBERON:0000043!4.88e-07!3;UBERON:0002199!5.34e-07!45;UBERON:0002416!5.34e-07!45;UBERON:0003102!6.83e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.29e-24;2!UBERON:0003688;5.14e-18;6!UBERON:0002358;5.14e-18;6!UBERON:0003684;5.14e-18;6!UBERON:0001178;5.14e-18;6!UBERON:0007846;1.08e-16;3!UBERON:0000043;1.08e-16;3!UBERON:0007845;1.08e-16;3!UBERON:0001013;8.52e-14;14!UBERON:0004457;3.22e-12;9!UBERON:0000042;3.22e-12;9!UBERON:0003127;4.04e-07;2!UBERON:0000341;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.02e-24,2;UBERON:0003688,8.44e-18,6;UBERON:0002358,8.44e-18,6;UBERON:0003684,8.44e-18,6;UBERON:0001178,8.44e-18,6;UBERON:0007846,7.30e-17,3;UBERON:0000043,7.30e-17,3;UBERON:0007845,7.30e-17,3;UBERON:0001013,6.76e-14,14;UBERON:0004457,3.37e-09,12;UBERON:0000042,3.37e-09,12;UBERON:0000341,3.93e-07,2;UBERON:0003127,4.17e-07,2 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.704772020479856,1.0007329835313,0.446961094427288,3.48935409640147,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0.573673241497627,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0.570471821544449,0,0,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0.515281080091258,0.558350568994769,0.506328996723799,0.292311015483596,0,0,0.161646056818812,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,3.57656445851882,1.690605505112,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.356857977594324,0,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0,1.28139149255701,1.02341449813341,0.321707842287215,1.48418066444991,0,0.177561725313127,0.328508624055237,0,0,0,0,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0.924100740528266,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0.404364963146632,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0.143411352204052,0,0,0,0.844430541190656,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.796991953004279,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,4.55848377495571,0.176512253383001,0,0,0,0,0,0,0.426905989478705,0,0,0,1.20116498503375,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0.889811221596536,0.457680136793847,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.994581110581374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0.3414369541879,2.76503864725637,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,1.84870251452567,2.59575937274273,0,0.109265571963696,0,0,0,0,0,0,0,0,0,1.27940389140589,0.23806443146374,0,0,0,0,0,0.217716747896961,0.342233301085281,0.336760265072938,1.2192774916755,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:55096960..55096991,- | |||
}} |
Revision as of 01:04, 22 January 2014
Short description: | p@chr4:55096960..55096991, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:55096960..55096991, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 7.30e-17 | 3 |
tendon cell | 7.30e-17 | 3 |
omentum preadipocyte | 2.38e-16 | 3 |
perirenal adipocyte cell | 2.06e-13 | 1 |
perirenal preadipocyte | 4.23e-13 | 1 |
preadipocyte | 2.68e-09 | 12 |
mesenchymal stem cell of adipose | 6.61e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 1.02e-24 | 2 |
omentum | 8.44e-18 | 6 |
peritoneum | 8.44e-18 | 6 |
abdominal cavity | 8.44e-18 | 6 |
visceral peritoneum | 8.44e-18 | 6 |
dense regular connective tissue | 7.30e-17 | 3 |
tendon | 7.30e-17 | 3 |
regular connective tissue | 7.30e-17 | 3 |
adipose tissue | 6.76e-14 | 14 |
cavity lining | 3.37e-09 | 12 |
serous membrane | 3.37e-09 | 12 |
throat | 3.93e-07 | 2 |
open tracheal system trachea | 4.17e-07 | 2 |