FFCP PHASE1:Hg19::chr4:88928606..88928634,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:88928606..88928634,- | |||
|id=chr4:88928606..88928634,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002579;1.96e-23;3!CL:0002615;2.96e-23;3!CL:0002334;8.61e-16;12!CL:0000136;3.67e-14;13!CL:0000197;9.68e-12;6!CL:0000098;9.68e-12;6!CL:0002167;9.68e-12;6!CL:0002581;5.70e-09;1!CL:0000222;1.32e-08;1!CL:0002616;1.32e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,2.12e-23,3;CL:0002615,3.87e-23,3;CL:0002334,7.99e-16,12;CL:0000136,2.37e-12,15;CL:0000197,9.87e-12,6;CL:0000098,9.87e-12,6;CL:0002167,9.87e-12,6;CL:0002581,4.89e-09,1;CL:0002616,7.75e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;3.72e-09;1!DOID:4235;1.32e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,3.58e-09,1;DOID:4235,9.74e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-09!115;UBERON:0003688!1.60e-09!6;UBERON:0002358!1.60e-09!6;UBERON:0003684!1.60e-09!6;UBERON:0001178!1.60e-09!6;UBERON:0002616!2.04e-09!59;UBERON:0001049!4.36e-09!57;UBERON:0005068!4.36e-09!57;UBERON:0006241!4.36e-09!57;UBERON:0007135!4.36e-09!57;UBERON:0002298!2.34e-08!8;UBERON:0000955!6.67e-08!69;UBERON:0006238!6.67e-08!69;UBERON:0003080!1.39e-07!42;UBERON:0002020!1.67e-07!34;UBERON:0003528!1.67e-07!34;UBERON:0001893!1.90e-07!34;UBERON:0002791!5.16e-07!33;UBERON:0002780!7.38e-07!41;UBERON:0001890!7.38e-07!41;UBERON:0006240!7.38e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.11e-45;6!UBERON:0002358;7.11e-45;6!UBERON:0003684;7.11e-45;6!UBERON:0001178;7.11e-45;6!UBERON:0004457;8.43e-30;9!UBERON:0000042;8.43e-30;9!UBERON:0005406;7.30e-16;2!UBERON:0006834;1.32e-08;1!UBERON:0000310;2.44e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.00e-44,6;UBERON:0002358,1.00e-44,6;UBERON:0003684,1.00e-44,6;UBERON:0001178,1.00e-44,6;UBERON:0004457,3.56e-22,12;UBERON:0000042,3.56e-22,12;UBERON:0005406,3.71e-16,2;UBERON:0006834,1.78e-08,1;UBERON:0000310,2.12e-07,10;UBERON:0001443,9.15e-07,11 | |||
|phase1_expression=1.63510541343501,0.642301571672949,3.38290569830331,2.00146596706261,1.34088328328186,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501559486172034,0,0,0,0.334231370655521,0,0,0.270803863765016,0.512365278902701,2.9913649938772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,1.45650098894541,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.427114777637135,0.211931901159562,1.20036438433761,0.206105058476878,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0.184099797284599,0,1.42003837006646,0.201504196455281,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,1.17217447210047,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,1.01346914667305,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,3.11956292296211,1.42743191037729,0.315404830067869,1.28855556491985,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,3.6830873589135,0.841980283299221,2.05022638809122,2.55853624533352,2.2519548960105,2.96836132889982,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,0,0,0.308097234229289,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0.296964680832639,0,0.994147647766298,0.140669416410513,0.222617410045812,0,0,9.76315142430242,0,0,0.102268682502155,0.123084805461069,3.42143546427988,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,2.17499872630438,0,0.254253650292766,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0.591095237907095,0,0,0,0.384751292518985,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,1.59847687665704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0.360299883542404,0,0,0.0824158583811665,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.182248669974074,0,0.0788057072991982,0.157363764404994,0,0,0.191915197319445,0.714695326373367,0,0,0,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0.339936274560377,0,0,0.258565912723101,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0.285465333544967,0,0.468334905806882,0,0,0.934853239388898,0,0,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0.464033759878494,0.398095888698616,0,0,0,1.26184898228651,0.192619830407303,0,0,0,0,0,0,0,0.657852148736121,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0,0,0,1.27201740261367,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.271878931907327,0.0657727735628491,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0,0.47775168788705,0.428859265059938,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,1.52934403219035,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0.462175628631418,0.432626562123789,0.126166424835079,0,0.126698501011437,0,0,0,0,0.303114792872958,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,1.22241444182866,0.406896178315738,0,0,0 | |||
|short_description=p@chr4:88928606..88928634,- | |||
}} |
Revision as of 02:11, 22 January 2014
Short description: | p@chr4:88928606..88928634, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:88928606..88928634, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 2.12e-23 | 3 |
adipocyte of omentum tissue | 3.87e-23 | 3 |
preadipocyte | 7.99e-16 | 12 |
fat cell | 2.37e-12 | 15 |
receptor cell | 9.87e-12 | 6 |
sensory epithelial cell | 9.87e-12 | 6 |
olfactory epithelial cell | 9.87e-12 | 6 |
perirenal preadipocyte | 4.89e-09 | 1 |
perirenal adipocyte cell | 7.75e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.00e-44 | 6 |
peritoneum | 1.00e-44 | 6 |
abdominal cavity | 1.00e-44 | 6 |
visceral peritoneum | 1.00e-44 | 6 |
cavity lining | 3.56e-22 | 12 |
serous membrane | 3.56e-22 | 12 |
perirenal fat | 3.71e-16 | 2 |
uterus or analog | 1.78e-08 | 1 |
breast | 2.12e-07 | 10 |
chest | 9.15e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 3.58e-09 | 1 |
spindle cell sarcoma | 9.74e-09 | 1 |