FFCP PHASE1:Hg19::chr4:151505217..151505229,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr4:151505217..151505229,+ | |||
|id=chr4:151505217..151505229,+ | |||
|ontology_enrichment_celltype=CL:0000064!1.07e-10!3;CL:0005012!1.07e-10!3;CL:0000067!1.07e-10!3;CL:0002304!1.07e-10!3;CL:0002586!1.74e-10!3;CL:0000149!5.80e-08!4;CL:0000062!1.15e-07!11;CL:0000375!1.15e-07!11;CL:0000335!1.15e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000062;9.69e-11;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,5.87e-09,11;CL:0000375,5.87e-09,11;CL:0000335,5.87e-09,11 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.33e-23;1!UBERON:0003852;1.33e-23;1!UBERON:0001045;3.28e-23;1!CL:0000335;5.86e-09;11!UBERON:0005062;6.87e-07;4!UBERON:0007284;6.87e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!2.37e-22!11;UBERON:0001456!2.00e-16!21;UBERON:0000019!6.25e-15!19;UBERON:0000047!6.25e-15!19;UBERON:0004088!6.25e-15!19;UBERON:0003072!6.25e-15!19;UBERON:0003071!6.25e-15!19;UBERON:0004128!6.25e-15!19;UBERON:0000970!4.41e-14!20;UBERON:0000488!1.20e-13!4;UBERON:0001444!1.69e-13!48;UBERON:0002104!2.58e-13!21;UBERON:0000020!5.55e-12!23;UBERON:0001032!2.12e-11!24;UBERON:0004456!2.12e-11!24;UBERON:0001778!1.07e-10!3;UBERON:0001775!1.07e-10!3;UBERON:0001781!1.74e-10!3;UBERON:0001782!1.74e-10!3;UBERON:0005424!1.74e-10!3;UBERON:0000966!2.05e-10!5;UBERON:0005388!2.05e-10!5;UBERON:0001802!2.05e-10!5;UBERON:0001155!1.42e-09!9;UBERON:0002203!4.18e-09!6;UBERON:0001768!4.18e-09!6;UBERON:0005085!4.28e-09!29;UBERON:0000033!5.80e-08!123;UBERON:0000059!9.31e-08!11;UBERON:0001801!9.89e-08!14;UBERON:0000063!1.94e-07!97;UBERON:0000153!2.32e-07!129;UBERON:0007811!2.32e-07!129;UBERON:0004121!6.27e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;1.33e-23;1!UBERON:0008193;1.33e-23;1!UBERON:0010912;1.33e-23;1!UBERON:0002514;1.33e-23;1!UBERON:0003457;1.33e-23;1!UBERON:0008907;1.33e-23;1!UBERON:0008001;1.33e-23;1!UBERON:0007213;1.33e-23;1!UBERON:0009891;1.33e-23;1!UBERON:0007914;1.33e-23;1!UBERON:0007375;1.33e-23;1!UBERON:0003323;1.33e-23;1!UBERON:0010258;1.33e-23;1!UBERON:0005253;1.33e-23;1!UBERON:0007842;1.33e-23;1!UBERON:0002397;1.33e-23;1!UBERON:0003113;1.33e-23;1!UBERON:0003277;1.33e-23;1!UBERON:0001709;1.33e-23;1!UBERON:0002244;1.33e-23;1!UBERON:0005620;1.33e-23;1!UBERON:0010364;1.33e-23;1!UBERON:0004288;1.33e-23;1!UBERON:0001154;3.28e-23;1!UBERON:0001153;3.28e-23;1!UBERON:0009854;3.28e-23;1!UBERON:0001155;1.46e-22;9!UBERON:0000059;1.32e-18;11!UBERON:0004089;1.65e-12;2!UBERON:0000160;1.19e-11;17!UBERON:0005409;2.94e-09;22!UBERON:0001708;6.87e-07;4!UBERON:0008895;6.87e-07;4!UBERON:0009856;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,1.34e-23,1;UBERON:0008193,1.34e-23,1;UBERON:0010912,1.34e-23,1;UBERON:0002514,1.34e-23,1;UBERON:0003457,1.34e-23,1;UBERON:0008907,1.34e-23,1;UBERON:0008001,1.34e-23,1;UBERON:0007213,1.34e-23,1;UBERON:0009891,1.34e-23,1;UBERON:0007914,1.34e-23,1;UBERON:0009292,1.34e-23,1;UBERON:0003099,1.34e-23,1;UBERON:0007375,1.34e-23,1;UBERON:0003323,1.34e-23,1;UBERON:0010258,1.34e-23,1;UBERON:0007842,1.34e-23,1;UBERON:0009494,1.34e-23,1;UBERON:0010042,1.34e-23,1;UBERON:0010045,1.34e-23,1;UBERON:0010259,1.34e-23,1;UBERON:0010359,1.34e-23,1;UBERON:0009526,1.34e-23,1;UBERON:0002397,1.34e-23,1;UBERON:0003113,1.34e-23,1;UBERON:0003277,1.34e-23,1;UBERON:0001709,1.34e-23,1;UBERON:0004066,1.34e-23,1;UBERON:0002244,1.34e-23,1;UBERON:0005620,1.34e-23,1;UBERON:0004362,1.34e-23,1;UBERON:0010364,1.34e-23,1;UBERON:0010046,1.34e-23,1;UBERON:0005868,1.34e-23,1;UBERON:0007238,1.34e-23,1;UBERON:0004288,1.34e-23,1;UBERON:0004068,1.34e-23,1;UBERON:0010334,1.34e-23,1;UBERON:0003852,1.34e-23,1;UBERON:0010253,1.34e-23,1;UBERON:0001154,5.13e-23,1;UBERON:0001153,5.13e-23,1;UBERON:0001045,5.13e-23,1;UBERON:0001155,1.35e-22,9;UBERON:0000059,1.24e-18,11;UBERON:0005253,1.65e-12,2;UBERON:0004089,1.65e-12,2;UBERON:0000160,1.15e-11,17;UBERON:0005409,2.86e-08,25;UBERON:0001708,6.87e-07,4;UBERON:0008895,6.87e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0.472674085820339,0.665188192387692,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,1.22834317311768,0.206651562351531,0,0,0,0,0.673344455816265,0.500474079487857,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.37223371266318,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,1.99267679560631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.103041011647722,0.54941678891006,0.41254749960294,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.23840590304675,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.124192805882767,8.43926673111008,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.215649622793364,0,0.764467467344097,0,0,0,0,0,0,0,2.82140754952547,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0.874238242015829,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:151505217..151505229,+ | |||
}} |
Revision as of 03:26, 22 January 2014
Short description: | p@chr4:151505217..151505229, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:151505217..151505229, + |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 5.87e-09 | 11 |
osteoprogenitor cell | 5.87e-09 | 11 |
mesenchyme condensation cell | 5.87e-09 | 11 |