FFCP PHASE1:Hg19::chr5:2752386..2752419,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153571 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24226 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=124bp_to_uc011cmh.1,uc011cmi.1,uc011cmj.1_5end | |||
|coexpression_cluster_id=C2821 | |||
|description=CAGE_peak_4_at_C5orf38_5end | |||
|id=chr5:2752386..2752419,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.64e-13!23;CL:0002251!1.15e-11!21;CL:0002076!1.64e-10!43;CL:0000057!5.96e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002251;7.31e-11;20!CL:0002623;4.09e-10;3!CL:0002620;4.91e-10;23!CL:0000622;5.61e-10;5!CL:0000154;2.62e-08;6!CL:0000150;4.51e-08;9!CL:0000349;5.70e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,6.28e-11,20;CL:0002623,4.52e-10,3;CL:0002620,5.37e-10,23;CL:0000622,6.65e-10,5;CL:0000154,3.01e-08,6;CL:0000150,6.06e-08,9;CL:0000349,4.93e-07,19;CL:0002561,8.90e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;7.32e-08;4!DOID:1612;7.32e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.61e-08,4;DOID:1612,8.61e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0003102!7.32e-20!95;UBERON:0002199!1.19e-16!45;UBERON:0002416!1.19e-16!45;UBERON:0002097!8.01e-16!40;UBERON:0000475!4.86e-11!365;UBERON:0004923!3.76e-09!57;UBERON:0005631!4.39e-08!14;UBERON:0000158!4.39e-08!14;UBERON:0003124!1.80e-07!7;UBERON:0001044!2.45e-07!6;UBERON:0003293!2.45e-07!6;UBERON:0003294!2.45e-07!6;UBERON:0010047!2.45e-07!6;UBERON:0000167!2.45e-07!6;UBERON:0004121!3.66e-07!169;UBERON:0000915!4.00e-07!52;UBERON:0000166!6.13e-07!21;UBERON:0000310!7.36e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;3.36e-17;6!UBERON:0003293;3.36e-17;6!UBERON:0003294;3.36e-17;6!UBERON:0010047;3.36e-17;6!UBERON:0003408;3.36e-17;6!UBERON:0000167;3.36e-17;6!UBERON:0000161;6.69e-14;19!UBERON:0000166;6.69e-14;19!UBERON:0001041;3.03e-09;14!UBERON:0000165;9.49e-09;28!UBERON:0002199;2.93e-08;46!UBERON:0002416;2.93e-08;46!UBERON:0003343;5.09e-08;4!UBERON:0004785;5.09e-08;4!UBERON:0002097;7.20e-08;41!UBERON:0005631;1.82e-07;10!UBERON:0000158;1.82e-07;10!UBERON:0003102;4.67e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,5.70e-17,6;UBERON:0003293,5.70e-17,6;UBERON:0003294,5.70e-17,6;UBERON:0010047,5.70e-17,6;UBERON:0000167,5.70e-17,6;UBERON:0003102,6.18e-14,99;UBERON:0002097,1.17e-11,41;UBERON:0000166,1.29e-11,22;UBERON:0002199,1.31e-11,46;UBERON:0002416,1.31e-11,46;UBERON:0005631,5.94e-10,14;UBERON:0000158,5.94e-10,14;UBERON:0003408,6.76e-10,10;UBERON:0000165,2.62e-08,29;UBERON:0000930,2.62e-08,29;UBERON:0003343,4.89e-08,4;UBERON:0004785,4.89e-08,4;UBERON:0004923,1.23e-07,66;UBERON:0001004,2.28e-07,74;UBERON:0003124,2.45e-07,7;UBERON:0001444,3.40e-07,49;UBERON:0005933,8.90e-07,2;UBERON:0005942,8.90e-07,2;UBERON:0005932,8.90e-07,2 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0,1.0007329835313,0,0,0,0,0.783556884599516,0.737201809504527,2.09340350391728,0.873765488520689,0,0,0,0,0,0,0,1.10808952269109,1.83600622119828,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0.354668382198357,0,0,0.74000264525148,0,0,0,0.151357427644931,0,1.40592859100278,1.87296046098192,0,1.64393548606981,0.23486899728753,0.647491777472526,0.561803226808994,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.600952235626387,0,0.179389635688862,0.85422955527427,1.27159140695737,2.10063767259082,1.33968288009971,1.03056216018252,0.930584281657949,0.675105328965065,0.68205903612839,0.757301322732344,1.84099797284599,1.45481451136931,1.06502877754984,0.503760491138201,1.01736355386293,1.35282597214308,0.272746120590835,0.286804595389004,0,0.265059536642971,0.116193942869518,0.414644220061482,0,1.45990943630332,0,0.643240938192885,1.38134921352481,2.3218396401599,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.109750285408626,0,0,0.277765335475589,0.977424915930974,2.07986957055916,0,0,0,0,0,0,3.1608175918371,10.3018339451385,0,0,0,0,0,0.283550194484773,0.716468181622786,1.74380363108377,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0,0,0,0,0,0,0,0,0.695068915744663,0,0,0,0,0,3.63753085735511,3.32870879020994,0.907170879989041,0.248107807818777,0.153461973288062,0.561320188866147,0,1.02341449813341,0,0,0.616838775210622,1.9531789784444,0.164254312027618,0,1.51073491997947,0.846016147141356,0.200506470303285,0.0920809889358963,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.412164046590889,0,0.082509499920588,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0.661139661443912,0.960950336825531,0.127612712494584,0.4046311234222,0,0,0,0.308033580176089,0,0.869932992075073,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0.211107635297664,0,1.89736586882858,1.04980416073495,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58116727106535,5.64232893582013,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,5.20855522170466,0.787139999965761,0,0.568967241427498,0,10.6374456795571,0,0,0,0,0.120596438625408,0,0.663475559587348,0.591095237907095,0.219385397153973,0,0.83654246567162,0,0,0,5.11618573135701,5.3237212241784,3.50901275705111,0.457987967009312,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0.391969589657511,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0.19980960958213,0.288180834308212,0,0,0,0,3.29971648463514,0,0,1.52997326454483,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,3.35434687599266,0.551639951094387,0.314727528809989,0,5.91648219798388,10.7472510498889,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.39669780522807,0,0,1.06787412567695,1.25763444079733,1.65695622138878,0,0,0,0.638341257770182,1.08803560673895,0,0.306345576763462,0.655745261419609,0,0,0,0,0,0.221858103073705,0.310482014706917,0.138348634936231,2.24964734331792,0,0,0,0.468334905806882,0.144921028610825,0.597019211547496,0.467426619694449,0.554805861502613,0,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0.385239660814607,1.07220795687463,2.3489486276869,0.453411851024545,0.231522474323834,1.22368352253234,0.895444205407437,0.617602894321944,1.53498834705095,0,0.771656153083659,0,0.512483037175893,0.690860683462397,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,2.68129933004261,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0,0,0,5.79071539156051,0.353909170043221,8.25428693347556,19.5238375794072,0,0,3.58049199809294,0,0.20170506870352,0,9.95245439029405,0,0,0.0675375846183947,0,0,0,0,1.09651553371436,0,0,3.57734797390867,0,0.336283722218824,0,0.227662191351298,0.354809480650555,0,0,0.815636795721981,0,0,0,0.078493092850514,0.157115589916002,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,2.07216164163037,4.4386804044427,5.53007729451273,1.29068207646083,0,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| |||
|short_description=p4@C5orf38 | |||
}} |
Revision as of 04:34, 22 January 2014
Short description: | p4@C5orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C5orf38_5end |
Coexpression cluster: | C2821_oral_large_pancreatic_Mesenchymal_keratoacanthoma_choriocarcinoma_breast |
Association with transcript: | 124bp_to_uc011cmh.1, uc011cmi.1, uc011cmj.1_5end |
EntrezGene: | C5orf38 |
HGNC: | 24226 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 6.28e-11 | 20 |
acinar cell of salivary gland | 4.52e-10 | 3 |
skin fibroblast | 5.37e-10 | 23 |
acinar cell | 6.65e-10 | 5 |
protein secreting cell | 3.01e-08 | 6 |
glandular epithelial cell | 6.06e-08 | 9 |
extraembryonic cell | 4.93e-07 | 19 |
outer root sheath cell | 8.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 5.70e-17 | 6 |
gland of oral region | 5.70e-17 | 6 |
gland of foregut | 5.70e-17 | 6 |
oral gland | 5.70e-17 | 6 |
oral cavity | 5.70e-17 | 6 |
surface structure | 6.18e-14 | 99 |
skin of body | 1.17e-11 | 41 |
oral opening | 1.29e-11 | 22 |
integument | 1.31e-11 | 46 |
integumental system | 1.31e-11 | 46 |
extraembryonic membrane | 5.94e-10 | 14 |
membranous layer | 5.94e-10 | 14 |
gland of gut | 6.76e-10 | 10 |
mouth | 2.62e-08 | 29 |
stomodeum | 2.62e-08 | 29 |
mucosa of oral region | 4.89e-08 | 4 |
respiratory system mucosa | 4.89e-08 | 4 |
organ component layer | 1.23e-07 | 66 |
respiratory system | 2.28e-07 | 74 |
chorion | 2.45e-07 | 7 |
subdivision of head | 3.40e-07 | 49 |
hair root sheath | 8.90e-07 | 2 |
hair outer root sheath | 8.90e-07 | 2 |
bulb of hair follicle | 8.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.61e-08 | 4 |
breast cancer | 8.61e-08 | 4 |