FFCP PHASE1:Hg19::chr5:6633534..6633578,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11284 | |||
|TSSclassifier=strong | |||
|UniProt=D6RDL6,D6RG03,B7Z4D8 | |||
|association_with_transcript=0bp_to_ENST00000504286,ENST00000510531,ENST00000513117,ENST00000537411_5end | |||
|description=CAGE_peak_1_at_SRD5A1_5end | |||
|id=chr5:6633534..6633578,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.48e-27!679;CL:0000004!3.48e-27!679;CL:0000255!3.48e-27!679;CL:0000012!8.36e-27!682;CL:0000860!2.22e-22!45;CL:0002057!1.38e-20!42;CL:0000003!6.33e-17!722;CL:0000063!7.83e-17!578;CL:0000066!9.59e-16!254;CL:0002194!1.28e-13!63;CL:0000576!1.28e-13!63;CL:0000040!1.28e-13!63;CL:0000559!1.28e-13!63;CL:0002009!8.03e-13!65;CL:0000144!1.02e-12!625;CL:0002371!8.92e-12!591;CL:0000839!9.55e-10!70;CL:0000557!1.34e-09!71;CL:0000766!9.25e-08!76;CL:0000223!9.75e-08!59;CL:0002076!4.93e-07!43;CL:0000221!6.17e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.36e-16;33!CL:0002057;9.36e-16;33!CL:0000473;2.00e-11;39!CL:0000234;2.00e-11;39!CL:0000576;3.44e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-20,42;CL:0002057,1.38e-20,42;CL:0000473,3.81e-18,48;CL:0000234,3.81e-18,48;CL:0000066,8.75e-16,253;CL:0002194,9.83e-13,59;CL:0000576,9.83e-13,59;CL:0000040,9.83e-13,59;CL:0000559,9.83e-13,59;CL:0002009,6.05e-12,61;CL:0000839,6.30e-09,66;CL:0000557,8.72e-09,67;CL:0000223,2.09e-07,58;CL:0000221,3.09e-07,72;CL:0000766,5.11e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;6.76e-15;42 | |||
|ontology_enrichment_disease=DOID:305!6.00e-11!106;DOID:0050687!2.88e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.00e-11,106;DOID:0050687,2.84e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.74e-09!80;UBERON:0001474!4.06e-08!86;UBERON:0004765!4.45e-08!101;UBERON:0001434!4.45e-08!101;UBERON:0000072!4.99e-07!46;UBERON:0001737!5.40e-07!9;UBERON:0004119!7.49e-07!169;UBERON:0000925!7.49e-07!169;UBERON:0006595!7.49e-07!169;UBERON:0001004!9.95e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.20e-07;9!UBERON:0001557;5.20e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.88e-08,76;UBERON:0001434,1.74e-07,100;UBERON:0001474,2.24e-07,82;UBERON:0004765,2.71e-07,90;UBERON:0001737,5.40e-07,9;UBERON:0000072,6.52e-07,47;UBERON:0004119,6.83e-07,160;UBERON:0000925,6.83e-07,160;UBERON:0006595,6.83e-07,160 | |||
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| |||
|short_description=p1@SRD5A1 | |||
}} |
Revision as of 04:35, 22 January 2014
Short description: | p1@SRD5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRD5A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000504286, ENST00000510531, ENST00000513117, ENST00000537411_5end |
EntrezGene: | SRD5A1 |
HGNC: | 11284 |
UniProt: | D6RDL6D6RG03B7Z4D8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.38e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-20 | 42 |
defensive cell | 3.81e-18 | 48 |
phagocyte | 3.81e-18 | 48 |
epithelial cell | 8.75e-16 | 253 |
monopoietic cell | 9.83e-13 | 59 |
monocyte | 9.83e-13 | 59 |
monoblast | 9.83e-13 | 59 |
promonocyte | 9.83e-13 | 59 |
macrophage dendritic cell progenitor | 6.05e-12 | 61 |
myeloid lineage restricted progenitor cell | 6.30e-09 | 66 |
granulocyte monocyte progenitor cell | 8.72e-09 | 67 |
endodermal cell | 2.09e-07 | 58 |
ectodermal cell | 3.09e-07 | 72 |
myeloid leukocyte | 5.11e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.88e-08 | 76 |
skeletal system | 1.74e-07 | 100 |
bone element | 2.24e-07 | 82 |
skeletal element | 2.71e-07 | 90 |
larynx | 5.40e-07 | 9 |
segment of respiratory tract | 6.52e-07 | 47 |
endoderm-derived structure | 6.83e-07 | 160 |
endoderm | 6.83e-07 | 160 |
presumptive endoderm | 6.83e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.00e-11 | 106 |
cell type cancer | 2.84e-09 | 143 |