FFCP PHASE1:Hg19::chr5:87438363..87438394,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C335 | |||
|description=CAGE_peak_at_chr5:87438363..87438394,+ | |||
|id=chr5:87438363..87438394,+ | |||
|ontology_enrichment_celltype=CL:0000128!2.60e-18!7;CL:0000126!2.60e-18!7;CL:0000127!2.60e-18!7;CL:0002453!2.60e-18!7;CL:0002319!1.88e-14!25;CL:0000047!6.33e-12!8;CL:0002605!1.19e-11!3;CL:0002603!1.47e-11!3;CL:0000243!3.88e-07!15;CL:0000125!3.88e-07!15;CL:0000030!3.88e-07!15;CL:0000339!3.88e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.61e-16;25!CL:0000540;4.93e-15;6!CL:0000404;4.93e-15;6!CL:0002605;2.06e-13;3!CL:0000128;1.36e-12;7!CL:0000126;1.36e-12;7!CL:0000127;1.36e-12;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.93e-19,8;CL:0002319,1.97e-16,25;CL:0000540,5.83e-15,6;CL:0000031,5.83e-15,6;CL:0000404,5.83e-15,6;CL:0002605,3.01e-13,3;CL:0000128,1.73e-12,7;CL:0000126,1.73e-12,7;CL:0000127,1.73e-12,7;CL:0002453,1.73e-12,7;CL:0000133,7.01e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.16e-30;3!CL:0000031;4.93e-15;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000956;5.87e-42;25!UBERON:0000203;5.87e-42;25!UBERON:0002619;6.35e-32;22!UBERON:0002791;6.77e-29;32!UBERON:0000073;9.85e-29;53!UBERON:0002616;9.85e-29;53!UBERON:0001869;1.06e-28;32!UBERON:0001950;8.70e-28;20!UBERON:0003528;2.22e-27;34!UBERON:0002020;2.22e-27;34!UBERON:0002037;5.22e-26;6!UBERON:0001893;2.09e-24;34!UBERON:0004733;6.69e-20;12!UBERON:0002028;6.69e-20;12!UBERON:0002702;1.28e-19;2!UBERON:0002780;1.11e-18;41!UBERON:0001890;1.11e-18;41!UBERON:0004732;2.29e-18;13!UBERON:0002680;1.93e-17;9!UBERON:0001895;1.93e-17;9!UBERON:0000200;1.36e-14;6!UBERON:0001870;2.06e-13;3!UBERON:0001871;9.89e-13;6!UBERON:0000955;1.67e-12;68!UBERON:0001016;3.40e-11;83!UBERON:0001017;9.57e-11;75!UBERON:0002021;1.54e-08;5!UBERON:0000349;2.08e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.91e-43,81;UBERON:0000073,2.99e-42,53;UBERON:0002616,2.99e-42,53;UBERON:0000956,6.51e-42,25;UBERON:0000203,6.51e-42,25;UBERON:0001049,6.65e-40,56;UBERON:0005068,6.65e-40,56;UBERON:0006241,6.65e-40,56;UBERON:0007135,6.65e-40,56;UBERON:0001016,2.22e-38,89;UBERON:0002791,1.07e-32,32;UBERON:0001869,1.07e-32,32;UBERON:0000955,4.73e-32,68;UBERON:0006238,4.73e-32,68;UBERON:0002619,5.59e-32,22;UBERON:0003528,9.65e-31,34;UBERON:0002020,9.65e-31,34;UBERON:0001893,9.65e-31,34;UBERON:0001950,7.97e-28,20;UBERON:0003075,1.18e-26,82;UBERON:0007284,1.18e-26,82;UBERON:0002037,5.23e-26,6;UBERON:0006215,5.23e-26,6;UBERON:0002780,2.34e-25,41;UBERON:0001890,2.34e-25,41;UBERON:0003080,2.34e-25,41;UBERON:0006240,2.34e-25,41;UBERON:0002346,2.57e-25,86;UBERON:0010371,1.49e-20,104;UBERON:0004733,5.50e-20,12;UBERON:0002028,5.50e-20,12;UBERON:0007277,5.50e-20,12;UBERON:0002702,1.55e-19,2;UBERON:0004121,5.39e-19,171;UBERON:0000924,5.39e-19,171;UBERON:0006601,5.39e-19,171;UBERON:0004732,1.91e-18,13;UBERON:0002680,1.94e-17,9;UBERON:0001895,1.94e-17,9;UBERON:0010092,1.94e-17,9;UBERON:0003056,1.18e-16,61;UBERON:0003076,5.61e-16,15;UBERON:0003057,5.61e-16,15;UBERON:0010314,1.07e-15,132;UBERON:0011216,1.25e-15,223;UBERON:0000200,1.57e-14,6;UBERON:0001870,2.34e-13,3;UBERON:0001871,8.77e-13,6;UBERON:0000025,5.15e-10,192;UBERON:0002021,1.48e-08,5;UBERON:0000349,1.72e-08,5;UBERON:0004111,1.71e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0.204000691244253,1.25381888591235,1.14494394852423,1.23186982565596,0.251085279189606,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,3.90419561572865,4.63973287666617,1.17261385734044,5.10351001322531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82870241333667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,6.10326945268333,10.6156089533976,2.06883333267483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,3.67287313956588,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.36203406111576,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.244052529803926,1.1267183763585,0.573409195690071,1.99672292766334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,1.43670473151436,0,3.52900374710405,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.620060389503552,0.19024743058172,5.4697480901822,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.591954962065642,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,9.16336449714793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr5:87438363..87438394,+ | |||
}} |
Revision as of 06:22, 22 January 2014
Short description: | p@chr5:87438363..87438394, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:87438363..87438394, + |
Coexpression cluster: | C335_cerebellum_parietal_occipital_temporal_duodenum_brain_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.93e-19 | 8 |
neural cell | 1.97e-16 | 25 |
neuron | 5.83e-15 | 6 |
neuroblast | 5.83e-15 | 6 |
electrically signaling cell | 5.83e-15 | 6 |
astrocyte of the cerebral cortex | 3.01e-13 | 3 |
oligodendrocyte | 1.73e-12 | 7 |
macroglial cell | 1.73e-12 | 7 |
astrocyte | 1.73e-12 | 7 |
oligodendrocyte precursor cell | 1.73e-12 | 7 |
neurectodermal cell | 7.01e-07 | 59 |