FFCP PHASE1:Hg19::chr5:142213315..142213336,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C228 | |||
|description=CAGE_peak_at_chr5:142213315..142213336,+ | |||
|id=chr5:142213315..142213336,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.14e-15!12;CL:0000417!3.14e-15!12;CL:0000668!3.14e-15!12;CL:0000414!3.14e-15!12;CL:0000412!3.14e-15!12;CL:0000182!3.14e-15!12;CL:0000623!3.16e-10!3;CL:0000825!3.16e-10!3;CL:0000223!1.05e-08!59;CL:0002563!1.59e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.23e-29;12!CL:0002563;2.78e-23;4!CL:0002253;1.48e-12;2!CL:0002535;3.62e-12;2!CL:0002231;1.04e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.15e-29,12;CL:0002563,2.94e-23,4;CL:0000223,1.46e-18,58;CL:0002253,1.48e-12,2;CL:0002535,3.62e-12,2;CL:0002231,1.04e-08,3;CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.84e-32;11!UBERON:0009497;2.11e-27;13!UBERON:0001041;1.79e-18;30!UBERON:0003104;6.15e-18;31!CL:0000223;2.06e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;7.20e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.80e-10,106;DOID:7,1.90e-09,39;DOID:0050687,2.17e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0009854!5.44e-11!23;UBERON:0009497!4.32e-10!25;UBERON:0000015!4.32e-10!25;UBERON:0002423!4.32e-10!25;UBERON:0006235!4.32e-10!25;UBERON:0004161!4.32e-10!25;UBERON:0003929!1.08e-09!54;UBERON:0009856!1.16e-09!26;UBERON:0004921!1.21e-09!129;UBERON:0004185!1.21e-09!129;UBERON:0002107!1.52e-09!19;UBERON:0006925!1.52e-09!19;UBERON:0008836!1.52e-09!19;UBERON:0005409!5.49e-09!35;UBERON:0000160!8.06e-09!27;UBERON:0001007!8.73e-09!155;UBERON:0001555!8.73e-09!155;UBERON:0007026!8.73e-09!155;UBERON:0001242!1.59e-08!4;UBERON:0001262!1.59e-08!4;UBERON:0004786!1.59e-08!4;UBERON:0004808!1.59e-08!4;UBERON:0001277!1.59e-08!4;UBERON:0001154!1.71e-08!1;UBERON:0001153!1.71e-08!1;UBERON:0008835!3.27e-08!22;UBERON:0003894!3.27e-08!22;UBERON:0001155!6.59e-08!9;UBERON:0004119!8.22e-08!169;UBERON:0000925!8.22e-08!169;UBERON:0006595!8.22e-08!169;UBERON:0005911!2.47e-07!82;UBERON:0007499!3.38e-07!25;UBERON:0003350!5.60e-07!5;UBERON:0005057!6.54e-07!26;UBERON:0004907!8.17e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;2.78e-23;4!UBERON:0001262;2.78e-23;4!UBERON:0004786;2.78e-23;4!UBERON:0004808;2.78e-23;4!UBERON:0001277;2.78e-23;4!UBERON:0002107;6.37e-19;19!UBERON:0006925;6.37e-19;19!UBERON:0002423;1.70e-14;25!UBERON:0000485;9.23e-14;7!UBERON:0003929;9.23e-14;7!UBERON:0006955;3.62e-12;2!UBERON:0004801;3.62e-12;2!UBERON:0003350;3.64e-12;8!UBERON:0002365;3.56e-11;31!UBERON:0002330;3.56e-11;31!UBERON:0002368;3.41e-10;33!UBERON:0000949;7.89e-08;43!UBERON:0001052;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.94e-23,4;UBERON:0001262,2.94e-23,4;UBERON:0004786,2.94e-23,4;UBERON:0004808,2.94e-23,4;UBERON:0001277,2.94e-23,4;UBERON:0003929,6.12e-20,54;UBERON:0002107,6.08e-19,19;UBERON:0006925,6.08e-19,19;UBERON:0008836,6.08e-19,19;UBERON:0005911,4.96e-17,82;UBERON:0008835,1.99e-16,22;UBERON:0003894,1.99e-16,22;UBERON:0009854,9.85e-16,23;UBERON:0007499,1.64e-14,25;UBERON:0009497,1.64e-14,25;UBERON:0000015,1.64e-14,25;UBERON:0002423,1.64e-14,25;UBERON:0006235,1.64e-14,25;UBERON:0004161,1.64e-14,25;UBERON:0009856,5.70e-14,26;UBERON:0006955,3.62e-12,2;UBERON:0004801,3.62e-12,2;UBERON:0003350,3.74e-12,8;UBERON:0002365,8.72e-12,31;UBERON:0002330,8.72e-12,31;UBERON:0004921,1.12e-11,118;UBERON:0000485,6.54e-11,9;UBERON:0002368,1.75e-10,35;UBERON:0002530,1.57e-09,59;UBERON:0001007,1.80e-09,145;UBERON:0001555,1.80e-09,145;UBERON:0007026,1.80e-09,145;UBERON:0004119,1.47e-08,160;UBERON:0000925,1.47e-08,160;UBERON:0006595,1.47e-08,160;UBERON:0000949,3.11e-08,45;UBERON:0000490,3.55e-07,148;UBERON:0001052,6.50e-07,4;UBERON:0005172,6.51e-07,54;UBERON:0005173,6.51e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4379247845096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.679662429205,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0.144090417154106,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,8.9812827830235,7.82950654621081,11.5934095429198,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22412889249628,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:142213315..142213336,+ | |||
}} |
Revision as of 08:00, 22 January 2014
Short description: | p@chr5:142213315..142213336, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:142213315..142213336, + |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.15e-29 | 12 |
intestinal epithelial cell | 2.94e-23 | 4 |
endodermal cell | 1.46e-18 | 58 |
epithelial cell of large intestine | 1.48e-12 | 2 |
epithelial cell of cervix | 3.62e-12 | 2 |
epithelial cell of prostate | 1.04e-08 | 3 |
epithelial cell | 8.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.80e-10 | 106 |
disease of anatomical entity | 1.90e-09 | 39 |
cell type cancer | 2.17e-07 | 143 |