FFCP PHASE1:Hg19::chr5:152870215..152870251,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4571 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z3F6,B7Z1W1 | |||
|association_with_transcript=0bp_to_ENST00000518142,ENST00000537037_5end | |||
|coexpression_cluster_id=C4478 | |||
|description=CAGE_peak_1_at_GRIA1_5end | |||
|id=chr5:152870215..152870251,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000056;5.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,5.18e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.51e-12;82!UBERON:0006215;2.73e-07;3!CL:0000515;5.31e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.09e-52!57;UBERON:0005068!1.09e-52!57;UBERON:0006241!1.09e-52!57;UBERON:0007135!1.09e-52!57;UBERON:0001017!3.37e-51!82;UBERON:0005743!1.21e-50!86;UBERON:0000073!3.27e-49!94;UBERON:0001016!3.27e-49!94;UBERON:0003075!4.28e-45!86;UBERON:0007284!4.28e-45!86;UBERON:0002616!7.58e-44!59;UBERON:0000955!4.59e-42!69;UBERON:0006238!4.59e-42!69;UBERON:0002346!7.07e-42!90;UBERON:0003080!5.27e-41!42;UBERON:0002780!2.06e-40!41;UBERON:0001890!2.06e-40!41;UBERON:0006240!2.06e-40!41;UBERON:0003056!1.03e-35!61;UBERON:0001893!8.12e-35!34;UBERON:0002020!9.34e-35!34;UBERON:0003528!9.34e-35!34;UBERON:0002791!8.69e-34!33;UBERON:0001869!2.31e-33!32;UBERON:0007023!6.55e-33!115;UBERON:0004121!1.75e-30!169;UBERON:0000033!6.05e-30!123;UBERON:0000153!8.40e-30!129;UBERON:0007811!8.40e-30!129;UBERON:0000924!4.97e-29!173;UBERON:0006601!4.97e-29!173;UBERON:0000956!3.93e-26!25;UBERON:0000203!3.93e-26!25;UBERON:0002619!3.54e-23!22;UBERON:0001950!6.88e-21!20;UBERON:0000475!1.32e-18!365;UBERON:0003076!1.80e-12!15;UBERON:0003057!1.80e-12!15;UBERON:0004732!1.13e-10!13;UBERON:0002420!2.10e-10!9;UBERON:0007245!2.10e-10!9;UBERON:0010009!2.10e-10!9;UBERON:0010011!2.10e-10!9;UBERON:0000454!2.10e-10!9;UBERON:0002308!5.57e-10!9;UBERON:0000125!5.57e-10!9;UBERON:0004733!5.62e-10!12;UBERON:0002028!5.62e-10!12;UBERON:0007277!5.62e-10!12;UBERON:0000064!1.16e-09!219;UBERON:0000025!9.45e-09!194;UBERON:0000483!3.33e-08!309;UBERON:0009663!3.50e-08!7;UBERON:0000468!3.83e-08!659;UBERON:0000481!4.34e-08!347;UBERON:0000119!6.98e-08!312;UBERON:0002298!7.36e-08!8;UBERON:0000200!8.42e-08!6;UBERON:0001871!9.21e-08!7;UBERON:0002680!1.75e-07!9;UBERON:0001895!1.75e-07!9;UBERON:0010092!1.75e-07!9;UBERON:0000349!3.56e-07!5;UBERON:0001894!5.83e-07!7;UBERON:0006222!5.83e-07!7;UBERON:0000467!7.40e-07!625;UBERON:0000480!8.92e-07!626;UBERON:0001872!9.53e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.60e-51;32!UBERON:0001893;1.06e-49;34!UBERON:0003528;2.00e-49;34!UBERON:0002020;2.00e-49;34!UBERON:0002791;1.47e-48;32!UBERON:0000956;1.57e-44;25!UBERON:0000203;1.57e-44;25!UBERON:0002780;2.72e-43;41!UBERON:0001890;2.72e-43;41!UBERON:0000073;9.54e-42;53!UBERON:0002616;9.54e-42;53!UBERON:0002619;2.12e-39;22!UBERON:0001950;2.01e-35;20!UBERON:0001017;9.39e-31;75!UBERON:0000955;7.84e-30;68!UBERON:0001016;3.19e-25;83!UBERON:0004732;2.87e-15;13!UBERON:0004733;4.36e-14;12!UBERON:0002028;4.36e-14;12!UBERON:0002420;5.76e-14;9!UBERON:0007245;5.76e-14;9!UBERON:0010009;5.76e-14;9!UBERON:0010011;5.76e-14;9!UBERON:0000454;5.76e-14;9!UBERON:0000125;2.63e-13;9!UBERON:0002308;2.63e-13;9!UBERON:0000200;2.51e-12;6!UBERON:0000349;2.92e-11;5!UBERON:0001871;6.78e-11;6!UBERON:0002298;1.60e-10;6!UBERON:0001872;1.62e-10;5!UBERON:0009663;3.13e-10;7!UBERON:0002021;3.85e-10;5!UBERON:0007023;6.36e-10;114!UBERON:0002680;7.12e-10;9!UBERON:0001895;7.12e-10;9!UBERON:0000369;6.30e-09;4!UBERON:0002435;6.30e-09;4!UBERON:0000204;6.30e-09;4!UBERON:0011216;1.70e-08;132!UBERON:0002784;1.02e-07;4!UBERON:0005383;3.98e-07;3!UBERON:0005382;3.98e-07;3!UBERON:0001870;5.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.78e-79,56;UBERON:0005068,4.78e-79,56;UBERON:0006241,4.78e-79,56;UBERON:0007135,4.78e-79,56;UBERON:0001017,1.22e-74,81;UBERON:0000073,2.43e-74,53;UBERON:0002616,2.43e-74,53;UBERON:0001016,6.38e-70,89;UBERON:0000955,2.40e-64,68;UBERON:0006238,2.40e-64,68;UBERON:0003075,2.35e-62,82;UBERON:0007284,2.35e-62,82;UBERON:0002780,5.06e-61,41;UBERON:0001890,5.06e-61,41;UBERON:0003080,5.06e-61,41;UBERON:0006240,5.06e-61,41;UBERON:0002346,1.19e-58,86;UBERON:0001869,4.23e-57,32;UBERON:0001893,1.17e-56,34;UBERON:0003528,1.49e-56,34;UBERON:0002020,1.49e-56,34;UBERON:0002791,2.62e-53,32;UBERON:0003056,2.36e-48,61;UBERON:0010371,2.70e-47,104;UBERON:0000956,1.57e-44,25;UBERON:0000203,1.57e-44,25;UBERON:0002619,2.12e-39,22;UBERON:0004121,2.10e-36,171;UBERON:0000924,2.10e-36,171;UBERON:0006601,2.10e-36,171;UBERON:0001950,2.01e-35,20;UBERON:0010314,4.26e-35,132;UBERON:0007023,7.83e-32,114;UBERON:0011216,2.41e-24,223;UBERON:0000025,1.33e-18,192;UBERON:0003076,2.51e-18,15;UBERON:0003057,2.51e-18,15;UBERON:0004732,2.86e-15,13;UBERON:0004733,4.51e-14,12;UBERON:0002028,4.51e-14,12;UBERON:0007277,4.51e-14,12;UBERON:0002420,5.77e-14,9;UBERON:0007245,5.77e-14,9;UBERON:0010009,5.77e-14,9;UBERON:0010011,5.77e-14,9;UBERON:0000454,5.77e-14,9;UBERON:0000125,2.63e-13,9;UBERON:0002308,2.63e-13,9;UBERON:0000200,2.49e-12,6;UBERON:0004111,2.56e-12,240;UBERON:0000483,3.75e-12,306;UBERON:0000119,7.33e-12,309;UBERON:0000349,2.96e-11,5;UBERON:0001871,6.85e-11,6;UBERON:0002298,1.58e-10,6;UBERON:0001872,1.60e-10,5;UBERON:0009663,3.13e-10,7;UBERON:0002021,3.86e-10,5;UBERON:0002680,7.28e-10,9;UBERON:0001895,7.28e-10,9;UBERON:0010092,7.28e-10,9;UBERON:0000369,6.43e-09,4;UBERON:0002435,6.43e-09,4;UBERON:0000204,6.43e-09,4;UBERON:0010082,6.43e-09,4;UBERON:0002784,1.08e-07,4;UBERON:0005383,4.02e-07,3;UBERON:0005382,4.02e-07,3;UBERON:0001870,5.10e-07,3 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,1.89515962028049,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,2.21617904538218,0,0.626909442956176,26.0474748289262,15.6036844583088,13.4330624366439,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,2.50668955317945,0.724232594804119,0,0,6.80650683581289,0.886917589850256,0.43917392846563,4.38779902917337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.647491777472526,0,0,0,0,0,0.247266929278557,0.910161361938026,0,0,0,0,0,0.919463387397059,0.751190294532984,0,0.89694817844431,9.39652510801697,3.39091041855299,0,1.44273540933814,1.03056216018252,1.8611685633159,0.337552664482532,0.0974370051611986,0.757301322732344,10.1254888506529,0.161646056818812,3.90510551768276,2.01504196455281,0,0,0,0,0,0.132529768321485,0.464775771478074,1.14027160516907,0.252320850875628,0,0,0,0,2.3218396401599,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0.648119116109707,0,0,1.44331342025273,22.60642897014,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,1.5985330740966,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,2.46128221334885,5.54786070886035,4.29746311775749,0,0,0,0,57.9335743227217,24.7265722329481,11.5993321916654,23.7873096774775,13.3967137847164,0,0,0,0.49076596687656,0,0.271265023699736,0.415941723061614,0,0,0.117141414992713,2.40756879782175,0,1.03473071292505,2.65690239414175,2.58116835958384,1.21637060255316,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0.462629081407967,0.355123450626254,0.821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.824328093181778,0,0,0,0,0,1.16004861950546,0,0,0,0,0.290033387828457,0.0852266274161009,0.979352392114111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0.539617372749944,0.54907405947211,0.471249609382746,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,2.15117028306077,0.0982490410131212,0,0,0,1.31717957183961,0,0,0.0962221127255121,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,62.6313018092768,113.238880210463,0,0,0,5.97743964753209,0.552567831062295,0,1.94310496754094,0.123084805461069,0,0,0,0,0.295930216910801,0,0,13.5706584453331,14.8428957058962,61.8802773803702,0,0,0.724999575434793,0,0,0,0,0,0,37.2011382041812,47.0326110639091,73.2392334322,65.2417633594225,33.987976179658,27.8619454385545,0,0,0.0769502585037971,0,0,0,0,0,1.37396390102793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,7.75113029277786,0.802577647298789,14.0558667435203,0,0,0,0,0,85.3943004949067,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,8.81324889044077,0,0,32.9216138970569,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,14.4100869290349,10.2679034168995,0,0,0,1.39641200636127,0.916641696046735,0,0,0,0,1.20930250476107,0,0,0,0,0,0,0,205.96448966061,118.224556504848,0.160753148465019,0.137539436597234,0,0,0,49.8146364595802,0,0,0.367182116944987,0,0,0,0,0,32.0378357444985,0.542999601753713,0,0.979762080328227,0,0,0,0,0,0,8.40339216350079,12.8265623690409,0,0,1.81538601365081,8.01741956008296,5.38510771951354,0,0,0,0,0,0,0,0,0,26.5820453990096,41.4889300666675,44.0672076086879,3.44045517414043,6.10109783452688,7.26527914414186,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,1.77962244319307,0,0,0,0,0,1.34940933649081,0,0,0,2.60872530905867,0,0,0,0.181848659202559,0,0,3.98095888698616,0.400027764663154,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0.303859956177382,55.8564082052992,0,0,0,0,0,0,0,0,0,0,0,0,2.48830904013189,1.53473245564382,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,33.0780509246767,19.8375206855819,22.0294725498869,14.1530291326121,66.0427844100901,11.6184184139886,44.405802548759,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,23.9083049549117,19.5269524653462,47.9513367882747,25.2394924571749,72.200674790405,0,0,0,0,8.57122937405259,8.07080933325178,0.606965604236632,0.455324382702595,0,0,0,4.89382077433188,21.0472875401117,0,0,0,38.0219727596725,0,0,0,0,3.00201485541957,0.316027223465453,0,0,0,0,0,1.38251932362818,0,0.828324005113957,0.681707238073262,0,0,0,0,0,0,0,0,0.615976841137482,0,0.485710993059139,0,0.198950775161368,0,0,0.659643100472575,0.301925687133347,0,0,0,0.490296643507811,0.471353094203252,7.06710481613803,3.26751040359795,6.7624916413344,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0.458729283404541,0.716697915757256,0,25.088859880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| |||
|short_description=p1@GRIA1 | |||
}} |
Revision as of 08:35, 22 January 2014
Short description: | p1@GRIA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRIA1_5end |
Coexpression cluster: | C4478_hippocampus_amygdala_duodenum_temporal_occipital_parietal_cerebellum |
Association with transcript: | 0bp_to_ENST00000518142, ENST00000537037_5end |
EntrezGene: | GRIA1 |
HGNC: | 4571 |
UniProt: | B7Z3F6B7Z1W1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 5.18e-07 | 4 |