FFCP PHASE1:Hg19::chr6:7579938..7579968,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1832 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3052 | |||
|TSSclassifier=weak | |||
|UniProt=P15924 | |||
|association_with_transcript=155bp_to_J05211_5end | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_10_at_DSP_5end | |||
|id=chr6:7579938..7579968,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.32e-29!254;CL:0000223!1.22e-17!59;CL:0002076!1.02e-14!43;CL:0002251!2.52e-10!21 | |||
|ontology_enrichment_celltype_v019=CL:0002251;7.85e-13;20!CL:0002076;1.07e-12;42!CL:0000039;4.27e-08;7!CL:0000586;4.27e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.52e-21,253;CL:0000223,6.14e-19,58;CL:0002076,7.39e-17,42;CL:0002251,7.37e-13,20;CL:0000039,2.51e-08,7;CL:0000586,2.51e-08,7 | |||
|ontology_enrichment_development_v019=CL:0000223;1.52e-10;58 | |||
|ontology_enrichment_disease=DOID:305!9.86e-22!106;DOID:0050687!5.79e-17!143;DOID:162!2.01e-09!235;DOID:14566!1.38e-08!239;DOID:193!9.56e-07!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.95e-12,106;DOID:0050687,1.53e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.39e-17!169;UBERON:0000925!6.39e-17!169;UBERON:0006595!6.39e-17!169;UBERON:0001007!1.87e-13!155;UBERON:0001555!1.87e-13!155;UBERON:0007026!1.87e-13!155;UBERON:0004921!5.28e-11!129;UBERON:0004185!5.28e-11!129;UBERON:0000077!4.20e-10!130;UBERON:0001004!3.02e-09!72;UBERON:0001041!5.91e-09!98;UBERON:0005911!5.24e-08!82;UBERON:0000466!1.12e-07!126;UBERON:0000062!2.62e-07!511;UBERON:0002365!6.36e-07!31;UBERON:0002330!6.36e-07!31;UBERON:0001048!6.37e-07!168;UBERON:0000166!6.41e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.81e-07;10!UBERON:0000158;4.81e-07;10!UBERON:0001737;7.27e-07;9!UBERON:0001557;7.27e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.97e-10,160;UBERON:0000925,1.97e-10,160;UBERON:0006595,1.97e-10,160;UBERON:0001007,6.81e-08,145;UBERON:0001555,6.81e-08,145;UBERON:0007026,6.81e-08,145;UBERON:0004921,7.42e-08,118;UBERON:0001041,6.97e-07,87 | |||
|phase1_expression=0.54503513781167,2.14100523890983,0,1.0007329835313,0,0,0,0,0,0.245733936501509,2.09340350391728,0,1.05506791291381,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0.221729397462564,0.175669571386252,0,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0.993943903390637,0.25326102332916,0.132409180813219,0,0,0,1.06748995729705,1.72667283892012,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.741800787835671,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.717558542755448,0.85422955527427,0.423863802319124,1.20036438433761,0.206105058476878,0.772921620136887,0.37223371266318,0.506328996723799,0.194874010322397,0.504867548488229,0,0.323292113637624,0.710019185033229,0.302256294682921,0.339121184620975,1.35282597214308,1.09098448236334,0.573609190778008,0.487894824518382,0.795178609928912,0.813357600086629,0.414644220061482,0.504641701751257,0.36497735907583,0,1.92972281457866,0,0.464367928031979,0,1.18306800039844,2.36018566109342,0.964044119533928,1.43382164552112,2.17879444092406,1.42362371466658,1.21348177344148,1.17732879075208,0.38474715694639,0,0,0.4115740113314,0,3.80265104465493,0.982827216677626,1.77236972004421,0,1.59884970106048,0.171567810298526,4.06076056011915,0,7.53967293087231,5.92566049014589,0,0,0,0.115930404975077,0.117408694235822,0,0,0.761016608938393,0,0,0,0,0.148631162288728,0,4.53551746136921,2.69372684760534,2.5971971583826,4.35950907770943,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,1.06375246633948,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,1.29964888536674,0,0,0,5.5113716763064,3.44585807502342,0,1.15825045334063,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49565033836969,2.85486382075459,1.73472656537328,0.819989904948992,0.300946099727719,0,0,1.99267679560631,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,1.24053903909388,3.99001130548962,1.68396056659844,0.384417447767103,1.53512174720011,3.53878626515936,0,0.154209693802656,0,0,0,0.232420756919918,1.45031339509947,1.80455823272956,19.52116965441,0,0,0,0,1.77135275340154,0,1.46139224653261,0.527758144464379,0,0,0.647747748306418,0,0.812839312631559,0,0.509752546090077,1.66215201785745,0.671624264166535,0,0,0,0,0.650756789328606,0.206082023295445,0,0,0.574265537996172,3.25030123018261,0,0,0,0,0,0,0,0.0852266274161009,0,4.46269271474641,1.72971060628596,1.27612712494584,5.6648357279108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,1.15466535270614,0,1.08890984861323,0.376575203107117,0.43050537267123,6.73885902670502,2.21715076768338,3.67557440331135,0,0,0,0,0,0,0,0,2.35012956480441,0,3.92064345569651,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0.146508179271894,0,0,0,4.29740072527842,0.296964680832639,6.14321404198464,0.994147647766298,0,0,0,0,0.19924798825107,0.276283915531148,10.077309914171,0.20453736500431,0,2.48831670129446,0.0898683511473268,0.716084698702437,0,0,0,0,0,0.0927680981618513,0,2.60427761085233,0.174919999992391,0,0.455173793141999,0.762760950878299,6.14607972596635,0,0,0.173624994933292,0,0.241192877250816,0,0.221158519862449,0,0,0,3.76444109552229,0.923403102045565,0,3.22789466143284,3.76982106521043,8.90908449760466,3.82801391678303,0.366390373607449,4.26427820814908,0,0,0,0,0,0,0,0,1.47698645169619,0.652931232636591,0.989471500037586,0.432777279484182,0,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0.391329237864179,0,0.789168805698781,0,0.30607276163049,0.31593289814244,0.150323419414493,0.207376382794494,0,0,0,0,0.284609546029793,0,7.2895090100755,1.56787835863004,0.69647365264322,0.52418000472609,0,0.774050650312681,0.219267951258557,0.574808199372465,3.20063754411784,0,1.58186518546373,0.137041924646751,0,0,0.977756913674015,0.320635281006135,0.640358984218058,3.9961921916426,4.17862209746907,0.458146384663663,1.37275998289572,0,0,7.30651507312066,0,0,0,0,0,0,0,1.28929632425987,0,0,2.52076466412852,0,4.79229601197579,3.004582336956,0.669514372325618,0.335917362433631,0.360299883542404,2.32991899054908,2.36349546921671,1.89556474276683,1.88729922791718,0.984274815147488,0,0,0,0.482259445395058,0.412618309791701,1.24632101408756,0.2249738915515,2.32140586367385,0,2.34804281319486,0.551639951094387,0.0524545881349981,0.211200673038813,0,0.575745591958336,0,1.32418394073086,0,0,0,0,0,0,0.340776043570843,0,1.17241786942466,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0.942324577501406,0,0,0,0.573409195690071,0.665574309221114,0,0.553394539744923,0.37494122388632,0,0.285465333544967,1.6468607378872,0,0.28984205722165,0,0.23371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| |||
|short_description=p10@DSP | |||
}} |
Revision as of 09:52, 22 January 2014
Short description: | p10@DSP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_DSP_5end |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | 155bp_to_J05211_5end |
EntrezGene: | DSP |
HGNC: | 3052 |
UniProt: | P15924 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.52e-21 | 253 |
endodermal cell | 6.14e-19 | 58 |
endo-epithelial cell | 7.39e-17 | 42 |
epithelial cell of alimentary canal | 7.37e-13 | 20 |
germ line cell | 2.51e-08 | 7 |
germ cell | 2.51e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.97e-10 | 160 |
endoderm | 1.97e-10 | 160 |
presumptive endoderm | 1.97e-10 | 160 |
digestive system | 6.81e-08 | 145 |
digestive tract | 6.81e-08 | 145 |
primitive gut | 6.81e-08 | 145 |
subdivision of digestive tract | 7.42e-08 | 118 |
foregut | 6.97e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.95e-12 | 106 |
cell type cancer | 1.53e-08 | 143 |