FFCP PHASE1:Hg19::chr6:7580647..7580666,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_at_chr6:7580647..7580666,+ | |||
|id=chr6:7580647..7580666,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.89e-29!254;CL:0000223!6.04e-13!59;CL:0002076!9.42e-12!43;CL:0002251!2.32e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.08e-10;42!CL:0002251;2.23e-10;20!CL:0000197;3.03e-08;6!CL:0000098;3.03e-08;6!CL:0002167;3.03e-08;6!CL:0000039;9.26e-08;7!CL:0000586;9.26e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.62e-22,253;CL:0000223,6.38e-14,58;CL:0002076,4.32e-13,42;CL:0002251,2.00e-10,20;CL:0000197,3.62e-08,6;CL:0000098,3.62e-08,6;CL:0002167,3.62e-08,6;CL:0000039,1.68e-07,7;CL:0000586,1.68e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000223;4.59e-08;58 | |||
|ontology_enrichment_disease=DOID:305!1.98e-22!106;DOID:0050687!3.66e-17!143;DOID:162!1.53e-08!235;DOID:14566!9.58e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.09e-14,106;DOID:0050687,1.25e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.41e-12!169;UBERON:0000925!4.41e-12!169;UBERON:0006595!4.41e-12!169;UBERON:0001007!2.16e-10!155;UBERON:0001555!2.16e-10!155;UBERON:0007026!2.16e-10!155;UBERON:0001004!3.87e-10!72;UBERON:0004921!3.18e-09!129;UBERON:0004185!3.18e-09!129;UBERON:0001041!2.05e-08!98;UBERON:0000077!2.36e-08!130;UBERON:0000065!7.68e-08!53;UBERON:0001737!4.44e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.24e-11;9!UBERON:0001557;1.24e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.35e-12,9;UBERON:0004119,4.34e-09,160;UBERON:0000925,4.34e-09,160;UBERON:0006595,4.34e-09,160;UBERON:0001557,7.60e-09,19;UBERON:0001041,7.67e-08,87;UBERON:0004921,1.65e-07,118;UBERON:0001007,1.75e-07,145;UBERON:0001555,1.75e-07,145;UBERON:0007026,1.75e-07,145;UBERON:0001004,2.66e-07,74 | |||
|phase1_expression=1.81678379270557,2.78330681058278,0.140954404095971,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0.443458794925128,0.351339142772504,0.0654895377488563,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,1.46437234528902,0,0,0,0,0,0,0,0,0,0,1.74437620857014,5.96366342034382,0.25326102332916,0.132409180813219,0,0,0,3.20246987189115,1.97334038733728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0,0,0,1.4351170855109,0,0.423863802319124,2.10063767259082,0.515262646192195,0.772921620136887,0.558350568994769,0.506328996723799,0.0974370051611986,2.77677151668526,0.276149695926898,0.161646056818812,1.06502877754984,0.503760491138201,0.508681776931463,0.386521706326594,1.36373060295417,0,0.975789649036763,0.397589304964456,0.580969714347592,0.518305275076852,1.26160425437814,1.82488679537915,0,0,0,0.928735856063958,0,3.43089720115547,2.19160097101532,1.68707720918437,2.09558548191549,1.52515610864684,2.60997681022206,2.83145747136345,1.56977172100277,1.53898862778556,0,0,0,0,3.80265104465493,0,1.77236972004421,0,0.491953754172454,0.171567810298526,3.95101027471052,0,5.93120937228622,5.55530670951178,0,0,0,0.115930404975077,0.117408694235822,0,0,1.33177906564219,0.790204397959275,0.858486162094873,0,0.234004265139238,0,0.93733833986777,5.03946384596579,4.53680311175637,4.65704318054811,3.48760726216754,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0,0,0,1.86156681609409,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0.871533458600294,1.49959486773086,0,0,0,5.5113716763064,3.44585807502342,0,0.723906533337896,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,2.70362119990049,3.21172179834891,2.83864347061082,1.05427273493442,0,0,0,1.99267679560631,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0.992431231275107,3.22270143904931,1.68396056659844,0.384417447767103,1.53512174720011,1.93024705372329,0,0.462629081407967,0.355123450626254,0.164254312027618,0,0.116210378459959,2.53804844142407,2.20557117333613,10.7734757054999,0,0,0.131124414959424,0.451199612907412,2.69553679865452,0,1.46139224653261,1.58327443339314,0,0,0.863663664408557,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0.650756789328606,0.309123034943167,0,0,0.574265537996172,2.60024098414608,0,0,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0.267096106940212,4.29740779938543,1.92190067365106,1.40373983744043,2.4277867405332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.673554789078584,0,1.08890984861323,0.470719003883896,0,0,1.7737206141467,3.90529780351831,0,0,0,0,0,0,0,0,0.961416640147258,0,1.96032172784825,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,3.58116727106535,0.593929361665277,6.14321404198464,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0,4.28285671352269,0.20453736500431,0,1.24415835064723,0.718946809178615,0.179021174675609,0,0,0,0,0,0.185536196323703,0,1.30213880542617,0.174919999992391,0.724999575434793,0.682760689712998,0.762760950878299,7.8007934983419,0,0,0.520874984799877,0,0,0,0,0,0.219385397153973,0.21787692703798,5.71637351542273,1.30815439456455,0,0.46112780877612,4.57763986489838,6.51884231532048,3.19001159731919,0.274792780205587,7.99552164027952,0,0,0,0,0,0,0,0,1.68798451622422,0.979396848954886,0,0.216388639742091,0,0.265372693510018,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0.586993856796269,0,0,0,0,0.31593289814244,0,0.518440956986236,0,0,0,0,0.569219092059585,0,4.85967267338367,3.33174151208884,0.609414446062818,0.34945333648406,0,1.06431964417994,0.511625219603299,0.164230914106418,3.4916045935831,0,1.35588444468319,0.274083849293502,0,0.126621591911757,0.586654148204409,0.480952921509202,0,5.39485945871752,2.3054466744657,0.229073192331831,2.05913997434357,0.14405479798815,0.49701014226173,3.29971648463514,0.135904206073614,0,0,0,0,0.136905378891993,0,1.28929632425987,0,0.279282401272254,3.89572720819862,1.43574604915363,4.19325901047881,3.004582336956,0.223171457441873,0.604651252380536,0.360299883542404,5.82479747637269,1.41809728153003,0.741742725430498,2.02210631562555,0.885847333632739,0,0,0,1.44677833618517,1.10031549277787,0.83088067605837,1.1248694577575,2.32140586367385,0,3.01891218839339,0.0788057072991982,0.262272940674991,0.105600336519406,0,1.15149118391667,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0.170388021785422,0,1.61207457045891,0,0,0,0.171086837884329,0,0.10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| |||
|short_description=p@chr6:7580647..7580666,+ | |||
}} |
Revision as of 09:52, 22 January 2014
Short description: | p@chr6:7580647..7580666, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr6:7580647..7580666, + |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.62e-22 | 253 |
endodermal cell | 6.38e-14 | 58 |
endo-epithelial cell | 4.32e-13 | 42 |
epithelial cell of alimentary canal | 2.00e-10 | 20 |
receptor cell | 3.62e-08 | 6 |
sensory epithelial cell | 3.62e-08 | 6 |
olfactory epithelial cell | 3.62e-08 | 6 |
germ line cell | 1.68e-07 | 7 |
germ cell | 1.68e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.35e-12 | 9 |
endoderm-derived structure | 4.34e-09 | 160 |
endoderm | 4.34e-09 | 160 |
presumptive endoderm | 4.34e-09 | 160 |
upper respiratory tract | 7.60e-09 | 19 |
foregut | 7.67e-08 | 87 |
subdivision of digestive tract | 1.65e-07 | 118 |
digestive system | 1.75e-07 | 145 |
digestive tract | 1.75e-07 | 145 |
primitive gut | 1.75e-07 | 145 |
respiratory system | 2.66e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.09e-14 | 106 |
cell type cancer | 1.25e-10 | 143 |