FFCP PHASE1:Hg19::chr6:27835062..27835085,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:27835062..27835085,+ | |||
|id=chr6:27835062..27835085,+ | |||
|ontology_enrichment_celltype=CL:0002202!8.02e-07!9;CL:0002632!8.02e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.40e-11;2!CL:0000558;1.40e-11;2!CL:0002202;1.71e-10;9!CL:0002632;1.71e-10;9!CL:0000307;8.98e-09;3!CL:0002328;1.31e-08;3!CL:0000346;2.64e-08;3!CL:1000428;2.64e-08;3!CL:0002368;2.82e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.82e-11,2;CL:0000765,2.82e-11,2;CL:0000050,2.82e-11,2;CL:0000038,2.82e-11,2;CL:0000558,2.82e-11,2;CL:0000547,2.82e-11,2;CL:0000549,2.82e-11,2;CL:0000550,2.82e-11,2;CL:0000552,2.82e-11,2;CL:0002202,1.71e-10,9;CL:0002632,1.71e-10,9;CL:0000068,9.00e-09,3;CL:0000069,9.00e-09,3;CL:0000307,9.00e-09,3;CL:0000377,9.00e-09,3;CL:0002328,1.31e-08,3;CL:0000346,1.97e-08,3;CL:1000428,1.97e-08,3;CL:0002368,2.82e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000377;8.98e-09;3 | |||
|ontology_enrichment_disease=DOID:2531!2.35e-11!51;DOID:0060083!2.35e-11!51;DOID:1240!5.87e-09!39;DOID:162!9.58e-08!235;DOID:14566!3.88e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000487!3.18e-07!22;UBERON:0006914!7.13e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.31e-08;3!UBERON:0002031;1.31e-08;3!UBERON:0000412;2.64e-08;3!UBERON:0001992;2.64e-08;3!UBERON:0001637;4.01e-07;42!UBERON:0003509;4.01e-07;42!UBERON:0004572;4.01e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.46e-09,42;UBERON:0003509,3.46e-09,42;UBERON:0004572,3.46e-09,42;UBERON:0004815,1.31e-08,3;UBERON:0002031,1.31e-08,3;UBERON:0004872,1.45e-08,83;UBERON:0000412,1.97e-08,3;UBERON:0001992,1.97e-08,3;UBERON:0007500,1.23e-07,59;UBERON:0001981,1.23e-07,59;UBERON:0004537,1.23e-07,59;UBERON:0006965,1.23e-07,59;UBERON:0003914,2.08e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0.547497700291537,0.376627918784408,0,0.0821005894499457,0.157421562627358,0,0,0,5.51652734687356,3.0120591877825,0,0.309868802321207,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.650296737799391,0.164437904603676,0,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.175669571386252,0,0.364295288292542,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0,1.13061588384802,0,1.37559020970034,1.67195973229448,0,0,0,0,0.760272105718513,0,0,0,0.17859945656816,0.898117490504679,0.225222960966644,7.66583187329416,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,1.12135520028461,2.1349799145941,0.24666754841716,0,0.134710672069688,0.490385709340376,0,0,0,0.312160076830321,1.1409436430889,0,0.587172493218824,0.161872944368132,0.842704840213491,0,0.368502951935304,0,0,0.247266929278557,0,0,0.673344455816265,0.125118519871964,0,0,0,0.300476117813194,0.226864366320042,0.179389635688862,0,0,0.900273288253207,0.103052529238439,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0.72995471815166,1.56449532329816,0,4.14404764057442,0,0,0.118306800039844,0,0,0,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0.858486162094873,0,0,0.445893486866185,0,0,0,0,0,2.30029607499127,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.921845842708516,0,0,0,0,0,0,0,0,1.20956117331872,0,0,0,0,0,0,0,0.308419387605311,0.532685175939381,0.0821271560138091,0,0.232420756919918,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,2.92278449306521,0,1.13733384070897,0.510281115829547,0.431831832204279,0,0,0,0,0,0.447749509444357,1.09629938322967,1.0457418040996,0.256450125116389,0,0.325378394664303,0.103041011647722,0.366277859273374,0.165018999841176,0,0,0,0,0.462145851343933,0,0,0,0.145016693914229,0.426133137080504,0,0,0.192190067365106,0,0,0,0,0.6970372701606,0,0,0.869932992075073,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0.636406495851874,7.06453776179307,0,0.274537029736055,0.471249609382746,0.202182481573316,0,0.421258456238981,0.48763373908959,0,3.16950440270266,0,0,1.13008116620243,3.85955740482287,0,0,0,0,0,4.64735247149625,5.07052084558035,0,0,0.35667105148125,0.354761064070598,0,0,0,1.39973888097993,0.192444225451024,5.3624182042863,8.71127878890581,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.557409525377156,0.28853842595289,0.0711418433484141,0.318852545457645,0.199579371432817,0.957526850661834,0.211673582723883,0.324621940274555,0,0.684704037099577,0,0,0.169291777801603,0.481764225311099,0,0.425846237690326,0.343505344755765,0,0.223676107892416,0.166849141711909,0,1.39203086947621,1.23087398947712,0.270455678475983,0.33307196799782,0,0,0,0,0.111443384277478,0.568272293612826,0,0.296964680832639,0,0,0,0,0.659215496907038,0.422250816255987,0,0,0,0.20453736500431,0,0,0,0.179021174675609,1.02314474045374,0,0,0,0,0,0,0.520855522170466,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,4.08773192782946,0.470940769185074,1.32969345520125,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0,0,0,0,0.729819156862664,0.19566461893209,0.242780379534093,0,0,0.30607276163049,0,0,0,0.664653872707185,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0.114536596165916,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0.164831716762333,0,0,0.592713324460491,0,0,0.803765742325096,0.275078873194468,0.415440338029185,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0.082092520749339,0.170388021785422,0.453248366080503,0,1.32506888912221,0,0,0,0,0,0,0,0,0.988058159489721,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,0.249960815924213,0,0,0,0,0.724605143054126,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,1.20008329398946,0,0.336749488765919,0,0,0.214441591374926,0.521988583930423,0.453411851024545,0.231522474323834,0.244736704506468,0.179088841081487,0,0,0,0,0.168942440653073,0,1.0362910251936,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0.436838552768056,1.01839517972415,0.425149840203366,0.247871528518004,0.558644917973244,0,0.0788617450012534,0.80057074828547,0.352675943690684,0,0,0,0,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| |||
|short_description=p@chr6:27835062..27835085,+ | |||
}} |
Revision as of 10:40, 22 January 2014
Short description: | p@chr6:27835062..27835085, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:27835062..27835085, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.82e-11 | 2 |
erythroblast | 2.82e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 2.82e-11 | 2 |
erythroid progenitor cell | 2.82e-11 | 2 |
reticulocyte | 2.82e-11 | 2 |
proerythroblast | 2.82e-11 | 2 |
basophilic erythroblast | 2.82e-11 | 2 |
polychromatophilic erythroblast | 2.82e-11 | 2 |
orthochromatic erythroblast | 2.82e-11 | 2 |
epithelial cell of tracheobronchial tree | 1.71e-10 | 9 |
epithelial cell of lower respiratory tract | 1.71e-10 | 9 |
duct epithelial cell | 9.00e-09 | 3 |
branched duct epithelial cell | 9.00e-09 | 3 |
tracheal epithelial cell | 9.00e-09 | 3 |
tracheoblast | 9.00e-09 | 3 |
bronchial epithelial cell | 1.31e-08 | 3 |
hair follicle dermal papilla cell | 1.97e-08 | 3 |
stem cell of epidermis | 1.97e-08 | 3 |
respiratory epithelial cell | 2.82e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
artery | 3.46e-09 | 42 |
arterial blood vessel | 3.46e-09 | 42 |
arterial system | 3.46e-09 | 42 |
lower respiratory tract epithelium | 1.31e-08 | 3 |
epithelium of bronchus | 1.31e-08 | 3 |
splanchnic layer of lateral plate mesoderm | 1.45e-08 | 83 |
dermal papilla | 1.97e-08 | 3 |
papillary layer of dermis | 1.97e-08 | 3 |
epithelial tube open at both ends | 1.23e-07 | 59 |
blood vessel | 1.23e-07 | 59 |
blood vasculature | 1.23e-07 | 59 |
vascular cord | 1.23e-07 | 59 |
epithelial tube | 2.08e-07 | 117 |