FFCP PHASE1:Hg19::chr6:44096519..44096530,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:44096519..44096530,- | |||
|id=chr6:44096519..44096530,- | |||
|ontology_enrichment_celltype=CL:0002076!1.53e-32!43;CL:0000223!1.39e-22!59;CL:0002368!2.51e-22!13;CL:0000244!6.45e-21!4;CL:0000731!6.45e-21!4;CL:0002159!1.40e-17!13;CL:0002621!5.43e-16!3;CL:0000622!6.30e-16!5;CL:0000066!4.22e-15!254;CL:0002251!5.18e-14!21;CL:0000154!2.71e-13!6;CL:0002327!1.64e-11!4;CL:0000317!8.96e-11!2;CL:1000448!8.96e-11!2;CL:0002308!8.96e-11!2;CL:0002140!8.96e-11!2;CL:0000362!9.25e-10!8;CL:0000150!6.85e-09!9;CL:0002202!7.76e-09!9;CL:0002632!7.76e-09!9;CL:0000220!3.05e-08!246;CL:0002077!3.43e-08!33;CL:0002321!3.95e-08!248;CL:0000240!1.11e-07!6;CL:0000311!1.11e-07!6;CL:0000079!1.11e-07!6;CL:0000237!1.11e-07!6;CL:0000036!1.11e-07!6;CL:0000357!1.11e-07!6;CL:0000114!1.11e-07!6;CL:0002166!1.15e-07!3;CL:0002623!1.69e-07!3;CL:0002328!1.87e-07!3;CL:0000068!2.06e-07!3;CL:0000069!2.06e-07!3;CL:0000307!2.06e-07!3;CL:0000377!2.06e-07!3;CL:0002231!2.19e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000244;3.32e-41;4!CL:0000731;3.32e-41;4!CL:0002621;7.01e-25;3!CL:0002252;2.71e-19;1!CL:0000575;2.48e-10;2!CL:0002076;8.80e-10;42!CL:0002251;1.00e-08;20!CL:0002166;1.93e-07;3!CL:0002328;2.63e-07;3!CL:0002231;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.53e-41,4;CL:0000731,2.53e-41,4;CL:0002621,5.50e-25,3;CL:0002252,1.30e-19,1;CL:0002076,8.54e-11,42;CL:0000575,3.27e-10,2;CL:0002251,8.52e-09,20;CL:0000066,6.20e-08,253;CL:0000223,7.91e-08,58;CL:0002166,1.93e-07,3;CL:0002328,2.97e-07,3;CL:0002231,3.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;9.65e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!9.27e-17!5;UBERON:0001949!5.43e-16!3;UBERON:0005910!5.55e-14!6;UBERON:0001911!1.64e-11!4;UBERON:0005333!1.64e-11!4;UBERON:0008425!1.64e-11!4;UBERON:0005311!1.64e-11!4;UBERON:0004119!4.84e-11!169;UBERON:0000925!4.84e-11!169;UBERON:0006595!4.84e-11!169;UBERON:0002419!8.96e-11!2;UBERON:0007771!8.96e-11!2;UBERON:0003297!8.96e-11!2;UBERON:0001821!8.96e-11!2;UBERON:0003487!8.96e-11!2;UBERON:0001820!8.96e-11!2;UBERON:0005089!8.96e-11!2;UBERON:0005088!8.96e-11!2;UBERON:0001004!3.62e-10!72;UBERON:0003102!3.04e-08!95;UBERON:0000166!5.56e-08!21;UBERON:0000161!8.49e-08!35;UBERON:0000165!8.70e-08!28;UBERON:0000930!8.70e-08!28;UBERON:0004815!1.87e-07!3;UBERON:0002031!1.87e-07!3;UBERON:0002365!8.48e-07!31;UBERON:0002330!8.48e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.54e-37;12!UBERON:0000365;3.85e-33;5!UBERON:0005910;9.32e-28;6!UBERON:0001949;7.01e-25;3!UBERON:0005911;1.59e-16;36!UBERON:0003929;2.98e-11;7!UBERON:0003350;5.79e-10;8!UBERON:0001828;5.79e-10;8!UBERON:0004807;5.52e-08;22!UBERON:0001043;2.63e-07;3!UBERON:0004815;2.63e-07;3!UBERON:0002031;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.10e-33,5;UBERON:0005910,7.78e-28,6;UBERON:0001949,5.50e-25,3;UBERON:0005911,1.88e-10,82;UBERON:0003350,5.29e-10,8;UBERON:0001828,5.29e-10,8;UBERON:0001043,2.05e-07,3;UBERON:0009143,2.05e-07,3;UBERON:0004815,2.97e-07,3;UBERON:0002031,2.97e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,1.10926203050036,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.63647672354501,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.201057944823262,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35174979478403,0.567100388969546,0.358234090811393,0.290633938513962,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.991709492165869,0.192190067365106,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0.670302275535787,0,0,1.72202149068492,5.05414427002877,1.33029046061003,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr6:44096519..44096530,- | |||
}} |
Revision as of 12:04, 22 January 2014
Short description: | p@chr6:44096519..44096530, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:44096519..44096530, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.53e-41 | 4 |
urothelial cell | 2.53e-41 | 4 |
gingival epithelial cell | 5.50e-25 | 3 |
epithelial cell of esophagus | 1.30e-19 | 1 |
endo-epithelial cell | 8.54e-11 | 42 |
corneal epithelial cell | 3.27e-10 | 2 |
epithelial cell of alimentary canal | 8.52e-09 | 20 |
epithelial cell | 6.20e-08 | 253 |
endodermal cell | 7.91e-08 | 58 |
epithelial cell of Malassez | 1.93e-07 | 3 |
bronchial epithelial cell | 2.97e-07 | 3 |
epithelial cell of prostate | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.10e-33 | 5 |
transitional epithelium | 7.78e-28 | 6 |
gingival epithelium | 5.50e-25 | 3 |
endo-epithelium | 1.88e-10 | 82 |
epithelium of mucosa | 5.29e-10 | 8 |
gingiva | 5.29e-10 | 8 |
esophagus | 2.05e-07 | 3 |
esophageal region | 2.05e-07 | 3 |
lower respiratory tract epithelium | 2.97e-07 | 3 |
epithelium of bronchus | 2.97e-07 | 3 |