FFCP PHASE1:Hg19::chr6:56484092..56484104,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=667 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1090 | |||
|TSSclassifier=strong | |||
|UniProt=Q03001 | |||
|association_with_transcript=-43bp_to_X58677_5end | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_63_at_DST_5end | |||
|id=chr6:56484092..56484104,- | |||
|ontology_enrichment_celltype=CL:0002076!4.99e-15!43;CL:0000223!7.49e-13!59;CL:0000066!1.43e-11!254;CL:0002251!1.82e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002623;6.19e-41;3!CL:0002076;6.76e-38;42!CL:0000622;7.09e-25;5!CL:0002251;9.05e-24;20!CL:0000154;7.53e-21;6!CL:0002231;8.30e-19;3!CL:0002368;1.64e-16;13!CL:0002336;1.84e-14;1!CL:0002261;1.84e-14;1!CL:0002170;1.84e-14;1!CL:0000150;4.05e-14;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.73e-44,42;CL:0002623,5.80e-41,3;CL:0000223,1.41e-31,58;CL:0000622,6.81e-25,5;CL:0002251,8.71e-24,20;CL:0000154,7.28e-21,6;CL:0002231,9.50e-19,3;CL:0002368,1.68e-16,13;CL:0002336,1.07e-14,1;CL:0002261,1.07e-14,1;CL:0002170,1.07e-14,1;CL:0000150,3.96e-14,9;CL:0000066,1.00e-08,253;CL:0002321,2.12e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000223;2.12e-15;58!UBERON:0010122;7.03e-08;2 | |||
|ontology_enrichment_disease=DOID:305!1.13e-09!106;DOID:0050687!1.11e-07!143;DOID:1749!6.52e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.46e-10!169;UBERON:0000925!1.46e-10!169;UBERON:0006595!1.46e-10!169;UBERON:0000161!4.07e-10!35;UBERON:0001004!7.45e-10!72;UBERON:0005153!1.08e-08!37;UBERON:0001007!1.90e-08!155;UBERON:0001555!1.90e-08!155;UBERON:0007026!1.90e-08!155;UBERON:0003729!4.85e-08!5;UBERON:0003102!1.53e-07!95;UBERON:0000153!6.87e-07!129;UBERON:0007811!6.87e-07!129;UBERON:0000166!8.59e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;7.53e-21;6!UBERON:0003293;7.53e-21;6!UBERON:0003294;7.53e-21;6!UBERON:0010047;7.53e-21;6!UBERON:0003408;7.53e-21;6!UBERON:0000167;7.53e-21;6!UBERON:0000161;1.13e-17;19!UBERON:0000166;1.13e-17;19!UBERON:0000165;6.42e-17;28!UBERON:0003729;8.27e-10;13!UBERON:0001041;2.79e-09;14!UBERON:0001004;2.87e-08;65!UBERON:0001873;7.03e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,7.28e-21,6;UBERON:0003293,7.28e-21,6;UBERON:0003294,7.28e-21,6;UBERON:0010047,7.28e-21,6;UBERON:0000167,7.28e-21,6;UBERON:0000161,1.13e-17,36;UBERON:0000165,2.44e-16,29;UBERON:0000930,2.44e-16,29;UBERON:0000166,3.16e-15,22;UBERON:0001004,1.32e-13,74;UBERON:0003408,8.91e-13,10;UBERON:0004119,1.64e-10,160;UBERON:0000925,1.64e-10,160;UBERON:0006595,1.64e-10,160;UBERON:0003729,8.15e-10,13;UBERON:0001444,1.50e-09,49;UBERON:0000033,2.59e-08,56;UBERON:0001873,5.74e-08,2;UBERON:0010122,5.74e-08,2;UBERON:0003102,7.07e-08,99;UBERON:0000153,1.79e-07,62;UBERON:0007811,1.79e-07,62 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0,0,0.103052529238439,0,0.18611685633159,0.337552664482532,0,0,0,0,0.710019185033229,0,0,0,1.09098448236334,0,0,0.132529768321485,0,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.804231779293047,1.94435734832912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0.985143749731331,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0.120859449591622,1.20303882181971,4.8802924136025,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,1.32227932288782,1.15314040419064,1.40373983744043,2.12431339796655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0.344743373241465,0,0,1.77148277162768,0.361789315876224,0,0.110579259931225,0,0,0,0.975966209950223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0.234264445725339,0,0.391329237864179,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0.693373365065693,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0.144090417154106,0,0,0,0,1.17847017308398,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0.105600336519406,0.537862017998534,0.383830394638891,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0,0.276697269872462,0.124980407962107,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0,0,0.796191777397232,0,0.343395705182793,0,0,0,0.428883182749851,0,0.226705925512272,0,0.244736704506468,0,0,0,0,0.38582807654183,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0.139879507719444,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.645902582527404,0,0.196295437002051,0.235939446695481,4.95257216008533,0.346576998451015,0,0,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.894336993477167,0.535701835878287,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,2.69381013411948,3.92652497316085,3.45629830907046,0,0,0.255640214277473,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0.971421986118279,0,0.198950775161368,0.118920090777569,0.11294608203896,0.329821550236287,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0.4226557275834,0,0,0,0,0.71421575442263,0,0.160482733378337,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.112131862580613,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p63@DST | |||
}} |
Revision as of 12:23, 22 January 2014
Short description: | p63@DST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_63_at_DST_5end |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | -43bp_to_X58677_5end |
EntrezGene: | DST |
HGNC: | 1090 |
UniProt: | Q03001 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.73e-44 | 42 |
acinar cell of salivary gland | 5.80e-41 | 3 |
endodermal cell | 1.41e-31 | 58 |
acinar cell | 6.81e-25 | 5 |
epithelial cell of alimentary canal | 8.71e-24 | 20 |
protein secreting cell | 7.28e-21 | 6 |
epithelial cell of prostate | 9.50e-19 | 3 |
respiratory epithelial cell | 1.68e-16 | 13 |
buccal mucosa cell | 1.07e-14 | 1 |
endothelial cell of viscerocranial mucosa | 1.07e-14 | 1 |
keratinized cell of the oral mucosa | 1.07e-14 | 1 |
glandular epithelial cell | 3.96e-14 | 9 |
epithelial cell | 1.00e-08 | 253 |
embryonic cell | 2.12e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 7.28e-21 | 6 |
gland of oral region | 7.28e-21 | 6 |
gland of foregut | 7.28e-21 | 6 |
oral gland | 7.28e-21 | 6 |
oral cavity | 7.28e-21 | 6 |
orifice | 1.13e-17 | 36 |
mouth | 2.44e-16 | 29 |
stomodeum | 2.44e-16 | 29 |
oral opening | 3.16e-15 | 22 |
respiratory system | 1.32e-13 | 74 |
gland of gut | 8.91e-13 | 10 |
endoderm-derived structure | 1.64e-10 | 160 |
endoderm | 1.64e-10 | 160 |
presumptive endoderm | 1.64e-10 | 160 |
mouth mucosa | 8.15e-10 | 13 |
subdivision of head | 1.50e-09 | 49 |
head | 2.59e-08 | 56 |
caudate nucleus | 5.74e-08 | 2 |
future caudate nucleus | 5.74e-08 | 2 |
surface structure | 7.07e-08 | 99 |
anterior region of body | 1.79e-07 | 62 |
craniocervical region | 1.79e-07 | 62 |