FFCP PHASE1:Hg19::chr6:169648933..169648983,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7058 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11786 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-158bp_to_ENST00000472733_5end | |||
|coexpression_cluster_id=C604 | |||
|description=CAGE_peak_2_at_THBS2_5end | |||
|id=chr6:169648933..169648983,- | |||
|ontology_enrichment_celltype=CL:0000055!6.30e-31!180;CL:0000057!1.90e-22!75;CL:0000187!1.61e-15!54;CL:0000680!1.69e-15!57;CL:0000056!1.69e-15!57;CL:0000355!1.69e-15!57;CL:0000183!4.11e-15!59;CL:0000393!8.38e-14!60;CL:0000211!8.38e-14!60;CL:0000192!4.38e-12!42;CL:0000514!4.38e-12!42;CL:0000359!7.72e-11!32;CL:0000723!9.10e-11!436;CL:0000048!1.06e-10!430;CL:0002334!2.85e-10!12;CL:0002494!5.08e-10!16;CL:0000034!9.71e-10!444;CL:0000222!2.78e-08!119;CL:0000136!3.80e-07!15;CL:0002620!6.47e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.83e-15;12!CL:0000134;7.83e-09;55!CL:0000359;3.74e-08;32!CL:0000136;6.18e-08;13!CL:0002494;6.89e-08;16!CL:0000048;1.02e-07;58!CL:1000306;3.12e-07;4!CL:0002547;3.12e-07;4!CL:0002615;8.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.69e-18,76;CL:0002334,1.77e-15,12;CL:0000723,1.45e-14,433;CL:0000048,1.62e-14,427;CL:0000034,8.00e-14,441;CL:0000136,2.09e-10,15;CL:0000134,7.11e-10,354;CL:0002320,2.67e-09,361;CL:0000359,1.30e-08,32;CL:0000192,4.22e-08,43;CL:0000514,4.22e-08,43;CL:0002494,9.12e-08,16;CL:0000219,1.02e-07,386;CL:1000306,1.96e-07,4;CL:0002547,1.96e-07,4;CL:0002615,8.61e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.26e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.38e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.96e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.47e-14!61;UBERON:0002036!3.47e-14!61;UBERON:0003082!3.47e-14!61;UBERON:0002385!6.39e-14!63;UBERON:0001015!6.39e-14!63;UBERON:0000383!6.39e-14!63;UBERON:0000914!1.17e-13!83;UBERON:0002329!1.17e-13!83;UBERON:0003077!1.17e-13!83;UBERON:0003059!1.17e-13!83;UBERON:0007282!1.17e-13!83;UBERON:0009618!1.17e-13!83;UBERON:0007285!1.17e-13!83;UBERON:0004290!2.53e-13!70;UBERON:0000486!3.61e-13!82;UBERON:0000948!1.26e-10!24;UBERON:0005498!1.26e-10!24;UBERON:0004140!1.26e-10!24;UBERON:0009881!1.26e-10!24;UBERON:0004141!1.26e-10!24;UBERON:0003084!1.26e-10!24;UBERON:0007005!1.26e-10!24;UBERON:0004139!1.26e-10!24;UBERON:0004291!1.26e-10!24;UBERON:0007100!1.40e-10!27;UBERON:0004872!3.57e-10!84;UBERON:0003102!5.70e-09!95;UBERON:0001637!6.51e-09!42;UBERON:0003509!6.51e-09!42;UBERON:0004572!6.51e-09!42;UBERON:0002199!7.42e-09!45;UBERON:0002416!7.42e-09!45;UBERON:0001009!3.64e-08!113;UBERON:0004573!4.07e-08!33;UBERON:0004571!4.07e-08!33;UBERON:0004535!6.76e-08!110;UBERON:0005256!1.27e-07!143;UBERON:0001981!1.56e-07!60;UBERON:0007500!1.56e-07!60;UBERON:0004537!1.56e-07!60;UBERON:0006965!1.56e-07!60;UBERON:0002049!2.70e-07!79;UBERON:0007798!2.70e-07!79;UBERON:0000475!3.27e-07!365;UBERON:0003688!5.03e-07!6;UBERON:0002358!5.03e-07!6;UBERON:0003684!5.03e-07!6;UBERON:0001178!5.03e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.72e-12;9!UBERON:0000042;2.72e-12;9!UBERON:0003688;1.06e-11;6!UBERON:0002358;1.06e-11;6!UBERON:0003684;1.06e-11;6!UBERON:0001178;1.06e-11;6!UBERON:0001013;9.44e-08;14!UBERON:0004573;9.62e-08;33!UBERON:0004571;9.62e-08;33!UBERON:0004797;3.12e-07;4!UBERON:0000415;3.12e-07;4!UBERON:0007240;3.12e-07;4!UBERON:0005742;3.12e-07;4!UBERON:0005734;3.12e-07;4!UBERON:0004664;3.12e-07;4!UBERON:0004663;3.12e-07;4!UBERON:0000992;3.58e-07;13!UBERON:0002119;5.86e-07;4!UBERON:0001637;7.04e-07;42!UBERON:0003509;7.04e-07;42!UBERON:0004572;7.04e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.20e-11,6;UBERON:0002358,1.20e-11,6;UBERON:0003684,1.20e-11,6;UBERON:0001178,1.20e-11,6;UBERON:0002384,1.67e-09,371;UBERON:0001637,6.83e-09,42;UBERON:0003509,6.83e-09,42;UBERON:0004572,6.83e-09,42;UBERON:0004872,9.67e-09,83;UBERON:0004573,9.88e-09,33;UBERON:0004571,9.88e-09,33;UBERON:0004457,1.00e-08,12;UBERON:0000042,1.00e-08,12;UBERON:0001013,5.72e-08,14;UBERON:0000415,1.96e-07,4;UBERON:0007240,1.96e-07,4;UBERON:0005742,1.96e-07,4;UBERON:0005734,1.96e-07,4;UBERON:0004664,1.96e-07,4;UBERON:0004663,1.96e-07,4;UBERON:0007500,3.55e-07,59;UBERON:0001981,3.55e-07,59;UBERON:0004537,3.55e-07,59;UBERON:0006965,3.55e-07,59;UBERON:0000992,4.17e-07,13;UBERON:0000948,6.25e-07,24;UBERON:0005498,6.25e-07,24;UBERON:0004140,6.25e-07,24;UBERON:0009881,6.25e-07,24;UBERON:0004141,6.25e-07,24;UBERON:0003084,6.25e-07,24;UBERON:0007005,6.25e-07,24;UBERON:0004139,6.25e-07,24;UBERON:0004291,6.25e-07,24;UBERON:0002119,7.55e-07,4 | |||
|phase1_expression=7.44881355009282,7.92171938396638,11.5582611358696,13.009528785907,16.0905993993824,23.55314015071,2.53299878168311,1.26343974685366,0.261185628199839,0,0,0,0,0,0.662794751455832,1.34465029290355,0,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.639312809217652,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.93943903390637,3.54565432660823,1.85372853138506,28.3968254541326,3.54668382198357,2.24271040056923,1.06748995729705,0.24666754841716,0.622422070799533,1.0776853765575,1.47115712802113,0.302714855289863,1.15235184896,0,0.312160076830321,0,0.747243402759005,0.352303495931295,0,0,0.204154171254893,0.245668634623536,0.309977343527296,2.37600571456411,11.3742787468136,0,0.718618141816238,0,0.250237039743928,0,0.438977620880838,1.83892677479412,6.76071265079686,0.113432183160021,0.717558542755448,2.77624605464138,0.423863802319124,0.900273288253207,0.309157587715317,1.03056216018252,1.48893485065272,0.843881661206331,0.779496041289589,1.00973509697646,1.56484827691909,2.26304479546337,3.19508633264953,1.10827308050404,0.169560592310488,0,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,2.94017422771084,0,0,0,0,0,0.514703430895577,2.19500570817251,0,0.904760751704678,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,3.36106460970222,0,0,3.98907174877306,2.08014873822732,0,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,2.29723871668228,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,5.61521326133179,3.7470087647404,4.1002627908823,3.04567678981054,6.3198680942821,18.1926003244788,1.03473071292505,0.664225598535437,1.10621501125022,1.21637060255316,0.195801157462741,0.343143423810856,0,0,0,0,0,0,11.4129591596637,3.22270143904931,17.9622460437167,20.3741247316565,3.07024349440022,19.3024705372329,1.48418066444991,1.23367755042124,4.26148140751505,0.492762936082855,2.59627214591811,1.51073491997947,0,4.21063587636898,0.0920809889358963,0,0.364182336013434,0.655622074797121,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0,0.27470839445503,0,0,0.650060246036521,0,0.48335359146061,0.308097234229289,0.614014698904518,0.275673144969061,0.429680979473094,0.580066775656914,0.426133137080504,0.801288320820636,1.15699440752685,0.384380134730212,0.127612712494584,0.2023155617111,0.464845549297286,7.55549632393536,0,0.616067160352178,0,0.869932992075073,1.48259375283136,1.71749864090389,0,1.58189712359363,1.90630193923825,0.767693373934002,0.855877976067841,3.18203247925937,0.78494864019923,0.179872457583315,1.92175920815238,1.64937363283961,0.404364963146632,1.58510321173008,2.52755073743389,0,2.19342140668156,12.6780176108107,0,0.848432591722276,6.78048699721457,2.75682671773062,0,3.06915619677634,0.578775534266688,1.31178950409327,0.405820753925408,0.30982349809975,1.12678241012897,0,0.589494246078727,1.07001315444375,0,1.26664581178598,3.62224382255892,0,0.349934720244983,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,2.27308917445131,0,0,0,0,0.140669416410513,0.222617410045812,0,0,1.79323189425963,0.552567831062295,0,0,0,4.3545542272653,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,1.13942055847001,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.789168805698781,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0.313808538937,0,0,0,0,0,0.859530882839914,0,0.279282401272254,0.229160424011684,3.58936512288407,0.399358000997982,0,0.669514372325618,0,4.68389848605125,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,4.3439968140297,0.864221491201268,0.979762080328227,0,0,1.19271615249795,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0.221858103073705,0,0,0,2.42638588066636,0,0,0,0,1.94031243752936,1.63599316893057,6.65767033803136,1.13641803165053,1.50940741051545,5.33886732957922,5.49216164152617,6.35169879805604,2.02068360757615,0.73927574994817,2.07085797312813,4.94783423379965,1.24210365501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| |||
|short_description=p2@THBS2 | |||
}} |
Revision as of 15:15, 22 January 2014
Short description: | p2@THBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_THBS2_5end |
Coexpression cluster: | C604_Fibroblast_hepatic_Ewing_Preadipocyte_Smooth_Adipocyte_Olfactory |
Association with transcript: | -158bp_to_ENST00000472733_5end |
EntrezGene: | THBS2 |
HGNC: | 11786 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.69e-18 | 76 |
preadipocyte | 1.77e-15 | 12 |
somatic stem cell | 1.45e-14 | 433 |
multi fate stem cell | 1.62e-14 | 427 |
stem cell | 8.00e-14 | 441 |
fat cell | 2.09e-10 | 15 |
mesenchymal cell | 7.11e-10 | 354 |
connective tissue cell | 2.67e-09 | 361 |
vascular associated smooth muscle cell | 1.30e-08 | 32 |
smooth muscle cell | 4.22e-08 | 43 |
smooth muscle myoblast | 4.22e-08 | 43 |
cardiocyte | 9.12e-08 | 16 |
motile cell | 1.02e-07 | 386 |
fibroblast of tunica adventitia of artery | 1.96e-07 | 4 |
fibroblast of the aortic adventitia | 1.96e-07 | 4 |
adipocyte of omentum tissue | 8.61e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.20e-11 | 6 |
peritoneum | 1.20e-11 | 6 |
abdominal cavity | 1.20e-11 | 6 |
visceral peritoneum | 1.20e-11 | 6 |
connective tissue | 1.67e-09 | 371 |
artery | 6.83e-09 | 42 |
arterial blood vessel | 6.83e-09 | 42 |
arterial system | 6.83e-09 | 42 |
splanchnic layer of lateral plate mesoderm | 9.67e-09 | 83 |
systemic artery | 9.88e-09 | 33 |
systemic arterial system | 9.88e-09 | 33 |
cavity lining | 1.00e-08 | 12 |
serous membrane | 1.00e-08 | 12 |
adipose tissue | 5.72e-08 | 14 |
artery wall | 1.96e-07 | 4 |
tunica adventitia of artery | 1.96e-07 | 4 |
adventitia | 1.96e-07 | 4 |
tunica adventitia of blood vessel | 1.96e-07 | 4 |
aorta tunica adventitia | 1.96e-07 | 4 |
aorta wall | 1.96e-07 | 4 |
epithelial tube open at both ends | 3.55e-07 | 59 |
blood vessel | 3.55e-07 | 59 |
blood vasculature | 3.55e-07 | 59 |
vascular cord | 3.55e-07 | 59 |
female gonad | 4.17e-07 | 13 |
heart | 6.25e-07 | 24 |
primitive heart tube | 6.25e-07 | 24 |
primary heart field | 6.25e-07 | 24 |
anterior lateral plate mesoderm | 6.25e-07 | 24 |
heart tube | 6.25e-07 | 24 |
heart primordium | 6.25e-07 | 24 |
cardiac mesoderm | 6.25e-07 | 24 |
cardiogenic plate | 6.25e-07 | 24 |
heart rudiment | 6.25e-07 | 24 |
left ovary | 7.55e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.96e-15 | 14 |