FFCP PHASE1:Hg19::chr7:128394431..128394448,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1281 | |||
|description=CAGE_peak_at_chr7:128394431..128394448,+ | |||
|id=chr7:128394431..128394448,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.16e-24!180;CL:0000680!2.35e-13!57;CL:0000056!2.35e-13!57;CL:0000355!2.35e-13!57;CL:0000187!5.07e-13!54;CL:0000057!5.47e-13!75;CL:0000183!3.15e-11!59;CL:0000393!3.26e-11!60;CL:0000211!3.26e-11!60;CL:0000192!1.33e-10!42;CL:0000514!1.33e-10!42;CL:0000548!1.42e-10!679;CL:0000004!1.42e-10!679;CL:0000255!1.42e-10!679;CL:0000012!5.86e-10!682;CL:0000359!2.83e-09!32;CL:0000222!3.53e-09!119;CL:0000144!5.83e-09!625;CL:0002371!6.44e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.05e-09;55!CL:0000723;5.84e-09;61!CL:0000048;7.44e-09;58!CL:0000359;1.99e-08;32!CL:0002334;7.65e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.11e-17,76;CL:0000048,1.52e-12,427;CL:0000723,6.40e-12,433;CL:0000034,4.04e-11,441;CL:0000680,9.60e-10,58;CL:0000056,9.60e-10,58;CL:0000355,9.60e-10,58;CL:0000192,4.39e-09,43;CL:0000514,4.39e-09,43;CL:0000187,9.19e-09,55;CL:0000359,2.41e-08,32;CL:0000393,7.73e-08,61;CL:0000211,7.73e-08,61;CL:0002334,4.47e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.29e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.32e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.07e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.62e-15!83;UBERON:0002329!9.62e-15!83;UBERON:0003077!9.62e-15!83;UBERON:0003059!9.62e-15!83;UBERON:0007282!9.62e-15!83;UBERON:0009618!9.62e-15!83;UBERON:0007285!9.62e-15!83;UBERON:0004290!5.31e-13!70;UBERON:0001134!1.00e-11!61;UBERON:0002036!1.00e-11!61;UBERON:0003082!1.00e-11!61;UBERON:0002385!2.04e-11!63;UBERON:0001015!2.04e-11!63;UBERON:0000383!2.04e-11!63;UBERON:0000486!2.05e-11!82;UBERON:0001637!1.99e-09!42;UBERON:0003509!1.99e-09!42;UBERON:0004572!1.99e-09!42;UBERON:0004872!5.19e-08!84;UBERON:0002199!8.12e-08!45;UBERON:0002416!8.12e-08!45;UBERON:0005256!1.00e-07!143;UBERON:0002049!1.50e-07!79;UBERON:0007798!1.50e-07!79;UBERON:0004573!1.69e-07!33;UBERON:0004571!1.69e-07!33;UBERON:0001981!2.08e-07!60;UBERON:0007500!2.08e-07!60;UBERON:0004537!2.08e-07!60;UBERON:0006965!2.08e-07!60;UBERON:0000490!2.40e-07!138;UBERON:0002097!6.42e-07!40;UBERON:0003102!6.62e-07!95;UBERON:0001009!9.76e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.61e-07;33!UBERON:0004571;5.61e-07;33!UBERON:0002118;7.52e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.20e-09,73;UBERON:0002329,2.77e-09,71;UBERON:0003059,2.77e-09,71;UBERON:0007282,2.77e-09,71;UBERON:0004290,2.77e-09,71;UBERON:0009618,2.77e-09,71;UBERON:0003077,4.98e-09,72;UBERON:0007285,4.98e-09,72;UBERON:0002199,5.08e-09,46;UBERON:0002416,5.08e-09,46;UBERON:0001134,1.37e-08,62;UBERON:0002036,1.37e-08,62;UBERON:0003082,1.37e-08,62;UBERON:0007503,2.42e-08,78;UBERON:0002385,4.51e-08,64;UBERON:0001015,4.51e-08,64;UBERON:0000383,4.51e-08,64;UBERON:0000486,5.31e-08,83;UBERON:0001637,1.10e-07,42;UBERON:0003509,1.10e-07,42;UBERON:0004572,1.10e-07,42;UBERON:0004573,1.92e-07,33;UBERON:0004571,1.92e-07,33;UBERON:0002097,3.68e-07,41;UBERON:0007100,9.34e-07,27 | |||
|phase1_expression=1.2717486548939,4.92431204949261,0.281908808191942,7.00513088471913,0.893922188854576,9.59572376510406,0,1.89515962028049,1.04474251279935,0,0,0.436882744260345,0.263766978228454,0.618831764800233,1.32558950291166,4.70627602516243,5.42425075221579,3.65155045193687,2.92759679274304,0,0.204000691244253,0.626909442956176,0.572471974262113,1.91624195102038,0.502170558379211,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0,1.84877005083394,0,0,0,0,0,0,0.223915474239924,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,4.87613732627923,0.670700859703636,0.383587685530591,0.722878304769133,0.50133791063589,2.31754430337318,0.795285947051099,2.43317435151318,0.283604451492204,1.33037638477538,0.614843499851882,0,0,0.370784442784429,0,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0,0.860234595106124,0,0,0.419499436209906,0.825354125820202,0.417989933073621,1.03366703667732,0,0.33472061276467,0,0.760272105718513,0.488124115096339,0,1.62028389576352,0.357198913136319,0.44905874525234,0.112611480483322,0,0,0.732806975721629,0,0,0,3.47880366186723,1.13967460498122,0.926864265692532,4.58938593198102,2.12801029319014,1.68203280042692,0,1.72667283892012,0.311211035399766,1.0776853765575,1.47115712802113,0.302714855289863,2.30470369792,0,0.624320153660641,0.570471821544449,1.19558944441441,0.469737994575059,0.323745888736263,1.12360645361799,0.61246251376468,1.47401180774122,0.206651562351531,0,2.71993622206413,0,0,0.841680569770331,0.875829639103749,0.277064115484183,2.19488810440419,2.75839016219118,1.80285670687916,1.36118619792025,2.51145489964407,1.06778694409284,2.7551147150743,5.40163972951924,1.8549455262919,0.772921620136887,2.41951913231067,1.85653965465393,1.26668106709558,1.7670364197088,0.644349290496095,1.13152239773168,6.03516307278244,1.61203357164224,0.508681776931463,0.773043412653187,0,0,0.609868530647977,0.265059536642971,0.580969714347592,0.414644220061482,0,0,1.56449532329816,6.43240938192885,0,2.78620756819187,1.44375896333917,0.709840800239063,0.842923450390509,0.723033089650446,0.110293972732394,0,0,0.404493924480493,0.588664395376038,0.769494313892781,0,0,0,0,0,0,1.18157981336281,0,0.368965315629341,0.857839051492628,0.219500570817251,0,0.703702806881416,0.0925884451585296,0,0,1.44331342025273,0.231860809950154,0.587043471179108,0.144366447761074,0.462985512576611,1.52203321787679,0,0,0.246217006087397,0.468008530278475,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0.766765358330422,0.985326475791887,0.088048434013226,0.414656231081544,0,0,0.253991577168676,0.381988425558278,1.17217447210047,0,0.514137463516618,0.300343057843917,0,0.560655421726804,0.43596006883328,0.36669142910475,0.904902010304444,0,3.381211010224,0.797814349754612,2.08014873822732,0.257207374262142,0,0,1.28680194292333,0,0.823240336780769,0.977208552881205,1.06617584622764,2.37585561880029,0.602878754119172,0.871533458600294,2.0994328148232,0,0,2.10833939483032,0.958499421966331,0,1.42636905040718,2.60606352001643,2.26023954805422,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0.500170521059677,0.813795071099207,2.07970861530807,6.0665856191035,1.41932173530541,0.937131319941706,0,0,0,1.99267679560631,0.921845842708516,0.60818530127658,0,0.343143423810856,0,0,0.106727557803444,0,0,0.907170879989041,1.48864684691266,0.920771839728375,4.49056151092918,1.79394808957981,2.55853624533352,3.05622450172854,1.48418066444991,2.46735510084249,1.42049380250502,0.328508624055237,2.59627214591811,0.813472649219715,0.120859449591622,0.802025881213139,1.19705285616665,1.03333003348146,3.45973219212762,2.49136388422906,0,0.462092022626489,0,0,0.316654886678627,0,0.510281115829547,1.72732732881711,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0.512900250232778,0,0.325378394664303,0,0.54941678891006,0.247528499761764,0,1.30012049207304,0,0.48335359146061,0.616194468458578,1.07452572308291,0.964856007391714,0.322260734604821,0.870100163485371,1.87498580315422,0.356128142586949,0.991709492165869,0.192190067365106,0.510450849978337,0.6069466851333,0.464845549297286,7.870308670766,2.0911118104818,0.308033580176089,0.532306030317022,0.869932992075073,0.9266210955196,1.43124886741991,1.116475108079,0.316379424718726,2.09693213316207,0.255897791311334,2.56763392820352,0.318203247925937,3.92474320099615,0.719489830333259,1.64722217841633,1.17812402345686,0.606547444719948,0,3.37006764991185,0,0.243713489631284,6.33900880540533,0.682499557039929,2.54529777516683,1.13008116620243,2.75682671773062,3.3171948762061,1.31535265576129,0.578775534266688,1.31178950409327,0.811641507850816,0.6196469961995,1.69017361519345,0,0.687743287091848,1.07001315444375,0.709522128141196,1.89996871767898,1.97576935775941,0,0,0,0,0,0.188287601553558,0,0,0,0.918893600827838,0,0,0,0,0,0,0.540031437238115,0,0.534120355637366,0,0,0.371606350251437,0,0.142283686696828,0,0.59873811429845,0,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0.390776190804081,0,0,0.270455678475983,0,0,0.37428108081644,0.146508179271894,0.485442086998054,0.111443384277478,0.568272293612826,1.19372242368845,1.18785872333055,0,0,0,0.333926115068718,0.329607748453519,0,0.796991953004279,0,0,0.102268682502155,0.123084805461069,4.3545542272653,0,0.179021174675609,0,0.295930216910801,0,0,0.969332746095218,0,0,0.260427761085233,0.0874599999961957,0,0.227586896570999,0.254253650292766,0.945550727071745,1.03423011972439,1.16641845353302,0.520874984799877,0,0.120596438625408,0,0,0.295547618953547,0,0.10893846351899,0,0.230850775511391,0.341826167541004,0.23056390438806,0.359030577639089,0,0.638002319463839,0.641183153813036,4.79731298416771,0,0,0,0.225595660617181,0.392125068635479,0.167821586975843,0.37950746544837,0,1.05499032264014,0.652931232636591,0.141353071433941,0,0,0,1.22206028986725,0,0.123563938946503,0.104421949505455,0,0.802577647298789,0.234264445725339,0.547364367646998,0.19566461893209,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0.330991955875499,0,0,0,0.138674673013139,1.04135843001079,0,0.0870592065804026,0.52418000472609,0.51595809741485,0.290268993867255,0.365446585430928,0.410577285266046,0.193978032976839,0.264768380074501,0.677942222341597,0.274083849293502,0.397429223405979,0,0.391102765469606,0.320635281006135,0,2.19790570540343,0,0,0.343189995723929,0.14405479798815,0,0.235694034616795,0.271808412147228,0.313808538937,0.611989305817931,0.288950589901519,0,0,0,1.28929632425987,0.262887354279314,1.39641200636127,0.458320848023367,0.717873024576814,1.59743200399193,1.71690419254628,0.223171457441873,0.0671834724867263,3.60299883542404,0,0.393915911536118,0.164831716762333,0.202210631562555,0.295282444544246,0.169346664131569,0.795229689809303,0,0,0.275078873194468,1.24632101408756,0,0,0.0607495566580247,0.670869375198532,0.0788057072991982,0.0524545881349981,0,0.537862017998534,0,0,1.32418394073086,0.25426853765475,2.17199840701485,4.32110745600634,3.91904832131291,1.19730191562487,0.082092520749339,1.70388021785422,0.566560457600628,0,0,0,0.13223260174269,0.171086837884329,0,0.320362237703084,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0.638341257770182,0,0.2506898940227,0,0,0,0,1.22026264901963,0,0,0,0,0.138348634936231,0.624902039810533,0.303298235083296,1.42732666772484,1.41159491818903,0.468334905806882,0.28984205722165,1.49254802886874,1.8697064787778,1.10961172300523,0.947015026375446,2.0125432140206,1.77962244319307,1.83072054717539,2.26846385644859,1.5543720058278,1.47855149989634,1.59296767163702,0.899606224327209,1.55262956876259,3.31764966272684,5.3168342911599,2.08698024724694,3.60618261593324,1.52322084867518,2.84809513243263,2.36403256963327,1.07410557042488,3.71227007902795,5.17524655308201,3.60024988196838,2.40376993627955,1.01024846629776,0,0.385239660814607,0,0,2.04035332961045,1.389134845943,0.734210113519403,0.895444205407437,1.23520578864389,0.657852148736121,0.883445729729405,1.15748422962549,1.68942440653073,0,1.38172136692479,1.21543982470953,0.138258436151731,0,0.132864840313363,0.163565394255844,3.93131818615695,1.72041036127604,0,0,0.213383459388282,0.516644938982447,0,0,0,0,0,0,0.314531883711793,0.54604819096007,0.169732529954025,1.06287460050841,0.123935764259002,0,1.59002175326709,0.0788617450012534,0,2.82140754952547,1.8374728641192,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.252071696221718,0,0.161475645631851,1.42769420259154,0.0981477185010256,0.11796972334774,0.183428598521679,0.115525666150338,2.66967466827017,0,0.198916222116275,0.225630985047772,1.61364054962816,0,0,2.12903492763126,0.147856086217045,0,0,0,0.0634158101939068,0,0.548257766857182,0,0.175871244359621,0,0,0,0,0.227662191351298,0.354809480650555,0.345701962667338,0.342976018874837,0,0,0.354581522651905,0.222462803784138,0.156986185701028,0.314231179832004,0,0,0.431855182437243,1.43325506366115,0,0,0.697448552208751,0,0,0.414432328326074,0,0,0,0.591660003652827,0.340853619036631,0,0,0,0.955538938977433,0.894843454382338,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0.356760272332706,0,0.329821550236287,0.452888530700021,0.154348316215889,0.437119121007915,2.82190377816914,0.245148321753905,0.235676547101626,0.785233868459781,0,0,1.52934403219035,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0.473314686579554,0,0,1.0580536810308,5.57992527250127,3.69740502905135,4.75889218336168,0.630832124175395,0.546327859818478,0.253397002022874,0.61193297845189,0,0.36757959813938,0.250707539292375,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0.448527450322454,0.12729431655633,0.202117188958219,0.653150243690884,0,0,0.358611026963382,0.665320713092027,0.0814032686109745,0.213454691755431,1.9307228228694,0.0898252021065869,0,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr7:128394431..128394448,+ | |||
}} |
Revision as of 19:10, 22 January 2014
Short description: | p@chr7:128394431..128394448, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:128394431..128394448, + |
Coexpression cluster: | C1281_Smooth_Fibroblast_Adipocyte_Olfactory_leiomyoma_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.11e-17 | 76 |
multi fate stem cell | 1.52e-12 | 427 |
somatic stem cell | 6.40e-12 | 433 |
stem cell | 4.04e-11 | 441 |
muscle precursor cell | 9.60e-10 | 58 |
myoblast | 9.60e-10 | 58 |
multi-potent skeletal muscle stem cell | 9.60e-10 | 58 |
smooth muscle cell | 4.39e-09 | 43 |
smooth muscle myoblast | 4.39e-09 | 43 |
muscle cell | 9.19e-09 | 55 |
vascular associated smooth muscle cell | 2.41e-08 | 32 |
electrically responsive cell | 7.73e-08 | 61 |
electrically active cell | 7.73e-08 | 61 |
preadipocyte | 4.47e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.20e-09 | 73 |
somite | 2.77e-09 | 71 |
presomitic mesoderm | 2.77e-09 | 71 |
presumptive segmental plate | 2.77e-09 | 71 |
dermomyotome | 2.77e-09 | 71 |
trunk paraxial mesoderm | 2.77e-09 | 71 |
paraxial mesoderm | 4.98e-09 | 72 |
presumptive paraxial mesoderm | 4.98e-09 | 72 |
integument | 5.08e-09 | 46 |
integumental system | 5.08e-09 | 46 |
skeletal muscle tissue | 1.37e-08 | 62 |
striated muscle tissue | 1.37e-08 | 62 |
myotome | 1.37e-08 | 62 |
epithelial vesicle | 2.42e-08 | 78 |
muscle tissue | 4.51e-08 | 64 |
musculature | 4.51e-08 | 64 |
musculature of body | 4.51e-08 | 64 |
multilaminar epithelium | 5.31e-08 | 83 |
artery | 1.10e-07 | 42 |
arterial blood vessel | 1.10e-07 | 42 |
arterial system | 1.10e-07 | 42 |
systemic artery | 1.92e-07 | 33 |
systemic arterial system | 1.92e-07 | 33 |
skin of body | 3.68e-07 | 41 |
primary circulatory organ | 9.34e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.07e-11 | 14 |