FFCP PHASE1:Hg19::chr8:4644826..4644848,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=38097 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_ENST00000517543_5end | |||
|coexpression_cluster_id=C896 | |||
|description=CAGE_peak_1_at_PAICSP4_5end | |||
|id=chr8:4644826..4644848,+ | |||
|ontology_enrichment_celltype=CL:0000012!3.07e-19!682;CL:0000548!3.13e-19!679;CL:0000004!3.13e-19!679;CL:0000255!3.13e-19!679;CL:0002321!2.63e-15!248;CL:0000066!3.98e-15!254;CL:0000220!1.00e-14!246;CL:0000003!1.41e-11!722;CL:0000055!7.12e-11!180;CL:0000133!2.22e-09!59;CL:0000221!3.69e-09!71;CL:0000144!1.45e-08!625;CL:0002319!3.56e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.54e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.66e-15,253;CL:0002321,8.67e-15,250;CL:0000133,1.92e-09,59;CL:0000221,3.32e-09,72;CL:0002319,3.21e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.12e-37!235;DOID:14566!2.30e-37!239;DOID:0050687!7.04e-18!143;DOID:0050686!5.14e-17!137;DOID:305!1.06e-15!106;DOID:2531!3.82e-12!51;DOID:0060083!3.82e-12!51;DOID:1240!3.61e-09!39;DOID:8692!2.47e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;9.09e-08;39!DOID:2531;1.76e-07;51!DOID:0060083;1.76e-07;51!DOID:8692;3.29e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.21e-37,235;DOID:14566,1.32e-37,239;DOID:0050687,5.22e-18,143;DOID:0050686,4.21e-17,137;DOID:305,8.17e-16,106;DOID:2531,3.51e-12,51;DOID:0060083,3.51e-12,51;DOID:1240,2.62e-09,39;DOID:8692,1.86e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@PAICSP4 | |||
}} |
Revision as of 20:30, 22 January 2014
Short description: | p1@PAICSP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PAICSP4_5end |
Coexpression cluster: | C896_retinoblastoma_iPS_acute_lymphoma_chronic_Burkitt_testicular |
Association with transcript: | -5bp_to_ENST00000517543_5end |
EntrezGene: | NA |
HGNC: | 38097 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.66e-15 | 253 |
embryonic cell | 8.67e-15 | 250 |
neurectodermal cell | 1.92e-09 | 59 |
ectodermal cell | 3.32e-09 | 72 |
neural cell | 3.21e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.21e-37 | 235 |
disease of cellular proliferation | 1.32e-37 | 239 |
cell type cancer | 5.22e-18 | 143 |
organ system cancer | 4.21e-17 | 137 |
carcinoma | 8.17e-16 | 106 |
hematologic cancer | 3.51e-12 | 51 |
immune system cancer | 3.51e-12 | 51 |
leukemia | 2.62e-09 | 39 |
myeloid leukemia | 1.86e-07 | 31 |