FFCP PHASE1:Hg19::chr8:70571757..70571776,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C637 | |||
|description=CAGE_peak_at_chr8:70571757..70571776,+ | |||
|id=chr8:70571757..70571776,+ | |||
|ontology_enrichment_celltype=CL:0002620!4.68e-12!23;CL:0000057!4.19e-11!75;CL:0000055!8.97e-10!180;CL:0000153!2.50e-08!9;CL:0000447!2.50e-08!9;CL:0002579!3.52e-07!3;CL:0000499!4.22e-07!27;CL:0000135!6.89e-07!3;CL:0000386!6.89e-07!3;CL:0000388!6.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000197;7.66e-16;6!CL:0000098;7.66e-16;6!CL:0002167;7.66e-16;6!CL:0000511;3.11e-11;1!CL:0002625;3.11e-11;1!CL:0002568;3.11e-11;1!CL:0000216;3.11e-11;1!CL:0000138;8.37e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,7.87e-16,6;CL:0000098,7.87e-16,6;CL:0002167,7.87e-16,6;CL:0000511,1.60e-11,1;CL:0002625,1.60e-11,1;CL:0000216,1.60e-11,1;CL:0002568,2.68e-11,1;CL:0000058,8.10e-08,6;CL:0000138,8.10e-08,6;CL:0000151,7.00e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;1.05e-20;2!DOID:6193;3.11e-11;1!DOID:4235;3.11e-11;1!DOID:3571;3.11e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,2.35e-20,2;DOID:4235,2.42e-11,1;DOID:3571,4.44e-11,1;DOID:6193,4.91e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!9.27e-09!6;UBERON:0002358!9.27e-09!6;UBERON:0003684!9.27e-09!6;UBERON:0001178!9.27e-09!6;UBERON:0004457!8.85e-08!12;UBERON:0000042!8.85e-08!12;UBERON:0000043!6.89e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;3.11e-11;1!UBERON:0001136;3.11e-11;1!UBERON:0001343;3.11e-11;1!UBERON:0004910;3.11e-11;1!UBERON:0004813;3.11e-11;1!UBERON:0003688;1.63e-07;6!UBERON:0002358;1.63e-07;6!UBERON:0003684;1.63e-07;6!UBERON:0001178;1.63e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.60e-11,1;UBERON:0001343,1.60e-11,1;UBERON:0004910,1.60e-11,1;UBERON:0005154,1.60e-11,1;UBERON:0005295,1.60e-11,1;UBERON:0004813,1.60e-11,1;UBERON:0005297,1.60e-11,1;UBERON:0005294,1.60e-11,1;UBERON:0010141,1.60e-11,1;UBERON:0005891,1.60e-11,1;UBERON:0003688,2.41e-07,6;UBERON:0002358,2.41e-07,6;UBERON:0003684,2.41e-07,6;UBERON:0001178,2.41e-07,6 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.1686349143074,0.50133791063589,2.89693037921647,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,0,0.286836620748814,0,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,1.25572744982203,0.213557388818567,0,0.900273288253207,0,0.515281080091258,0.558350568994769,0.675105328965065,0.292311015483596,0.252433774244115,0.0920498986422993,2.42469085228218,0.710019185033229,0.604512589365842,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16344544182,0,0,0,2.08014873822732,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70362119990049,0.713715955188647,1.10391690523754,2.45996971484698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,1.12264037773229,0.384417447767103,1.02341449813341,0.965123526861645,0,0,0,0,0,0,0,0,0,0.34444334449382,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,1.21856744815642,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0319161948297,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0.53168342911599,0,0.450772826991655,0.380805212168795,0.406870733204662,0,0.214821114084977,0,0.398095888698616,0,0,0.336749488765919,0,0,0.643324774124777,0,0.453411851024545,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,1.1441462864015,0,0,0,0.20170506870352,0,0,0.49131575253029,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,1.18948980281472,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,1.22068853494722,0,0,0 | |||
|short_description=p@chr8:70571757..70571776,+ | |||
}} |
Revision as of 22:27, 22 January 2014
Short description: | p@chr8:70571757..70571776, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr8:70571757..70571776, + |
Coexpression cluster: | C637_osteoclastoma_Fibroblast_Preadipocyte_Chondrocyte_spindle_hepatic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 7.87e-16 | 6 |
sensory epithelial cell | 7.87e-16 | 6 |
olfactory epithelial cell | 7.87e-16 | 6 |
androgen binding protein secreting cell | 1.60e-11 | 1 |
seminiferous tubule epithelial cell | 1.60e-11 | 1 |
Sertoli cell | 1.60e-11 | 1 |
mesenchymal stem cell of Wharton's jelly | 2.68e-11 | 1 |
chondroblast | 8.10e-08 | 6 |
chondrocyte | 8.10e-08 | 6 |
secretory cell | 7.00e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.60e-11 | 1 |
seminiferous tubule of testis | 1.60e-11 | 1 |
epithelium of male gonad | 1.60e-11 | 1 |
epithelial cord | 1.60e-11 | 1 |
sex cord | 1.60e-11 | 1 |
seminiferous tubule epithelium | 1.60e-11 | 1 |
testis sex cord | 1.60e-11 | 1 |
genital ridge | 1.60e-11 | 1 |
primitive sex cord of indifferent gonad | 1.60e-11 | 1 |
coelomic epithelium | 1.60e-11 | 1 |
omentum | 2.41e-07 | 6 |
peritoneum | 2.41e-07 | 6 |
abdominal cavity | 2.41e-07 | 6 |
visceral peritoneum | 2.41e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 2.35e-20 | 2 |
spindle cell sarcoma | 2.42e-11 | 1 |
liver cancer | 4.44e-11 | 1 |
epithelioid sarcoma | 4.91e-11 | 1 |