FFCP PHASE1:Hg19::chr8:133979112..133979132,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr8:133979112..133979132,+ | |||
|id=chr8:133979112..133979132,+ | |||
|ontology_enrichment_celltype=CL:0000153!4.45e-12!9;CL:0000447!4.45e-12!9;CL:0000214!5.49e-10!3;CL:0000327!8.45e-08!14;CL:0002557!1.54e-07!1;CL:0002127!1.64e-07!1;CL:0000914!1.64e-07!1;CL:0000911!1.64e-07!1;CL:0000814!1.64e-07!1;CL:0002042!1.64e-07!1;CL:0002039!1.64e-07!1;CL:0002040!1.64e-07!1;CL:0002041!1.64e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.07e-23;6!CL:0000404;6.07e-23;6!CL:0000214;3.06e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.07e-23,6;CL:0000031,6.07e-23,6;CL:0000404,6.07e-23,6;CL:0000047,1.71e-17,8;CL:0000214,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.54e-27;5!CL:0000031;6.07e-23;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.10e-14!2;UBERON:0006915!5.49e-10!3;UBERON:0002018!5.49e-10!3;UBERON:0002217!5.49e-10!3;UBERON:0007616!5.49e-10!3;UBERON:0009722!1.08e-09!11;UBERON:0007690!1.08e-09!11;UBERON:0002146!9.72e-08!1;UBERON:0005623!9.72e-08!1;UBERON:0008814!3.91e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.54e-27;5!UBERON:0000341;6.48e-18;2!UBERON:0006915;3.06e-12;3!UBERON:0007616;3.06e-12;3!UBERON:0002217;3.06e-12;3!UBERON:0002018;3.06e-12;3!UBERON:0000974;7.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.38e-27,5;UBERON:0004117,2.38e-27,5;UBERON:0007689,2.38e-27,5;UBERON:0007123,2.38e-27,5;UBERON:0003091,2.38e-27,5;UBERON:0000341,6.48e-18,2;UBERON:0009722,4.80e-13,11;UBERON:0007690,4.80e-13,11;UBERON:0006915,3.24e-12,3;UBERON:0007616,3.24e-12,3;UBERON:0002217,3.24e-12,3;UBERON:0002018,3.24e-12,3;UBERON:0008814,2.33e-08,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,2.31986643833309,0,3.82763250991898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05553817648832,0.658589785919804,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,4.76128862927481,0,0,0,1.14564884900697,40.0192034137274,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:133979112..133979132,+ | |||
}} |
Revision as of 23:59, 22 January 2014
Short description: | p@chr8:133979112..133979132, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr8:133979112..133979132, + |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.07e-23 | 6 |
neuroblast | 6.07e-23 | 6 |
electrically signaling cell | 6.07e-23 | 6 |
neuronal stem cell | 1.71e-17 | 8 |
synovial cell | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.38e-27 | 5 |
pharyngeal pouch | 2.38e-27 | 5 |
thyroid diverticulum | 2.38e-27 | 5 |
pharyngeal pouch 2 | 2.38e-27 | 5 |
thyroid primordium | 2.38e-27 | 5 |
throat | 6.48e-18 | 2 |
entire pharyngeal arch endoderm | 4.80e-13 | 11 |
early pharyngeal endoderm | 4.80e-13 | 11 |
stratified squamous epithelium | 3.24e-12 | 3 |
layer of synovial tissue | 3.24e-12 | 3 |
synovial joint | 3.24e-12 | 3 |
synovial membrane of synovial joint | 3.24e-12 | 3 |
pharyngeal arch system | 2.33e-08 | 18 |