FFCP PHASE1:Hg19::chr8:144679264..144679283,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1936 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3211 | |||
|TSSclassifier=strong | |||
|UniProt=E9PJ84,E9PIP5 | |||
|association_with_transcript=0bp_to_ENST00000526133,ENST00000531953_5end | |||
|description=CAGE_peak_4_at_EEF1D_5end | |||
|id=chr8:144679264..144679283,- | |||
|ontology_enrichment_celltype=CL:0000055!1.38e-29!180;CL:0002321!3.62e-23!248;CL:0000220!1.06e-22!246;CL:0000183!9.68e-19!59;CL:0000680!2.58e-18!57;CL:0000056!2.58e-18!57;CL:0000355!2.58e-18!57;CL:0000187!1.62e-17!54;CL:0000548!3.92e-17!679;CL:0000004!3.92e-17!679;CL:0000255!3.92e-17!679;CL:0000222!1.80e-16!119;CL:0000012!2.84e-16!682;CL:0000192!4.71e-16!42;CL:0000514!4.71e-16!42;CL:0000393!1.90e-15!60;CL:0000211!1.90e-15!60;CL:0000359!1.97e-13!32;CL:0000144!1.49e-12!625;CL:0000057!1.41e-11!75;CL:0002371!1.93e-09!591;CL:0000066!2.42e-08!254;CL:0000003!5.31e-08!722;CL:0002494!5.84e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.37e-13;32!CL:0000192;7.67e-12;43!CL:0000187;1.66e-10;55!CL:0000393;1.57e-08;61!CL:0000211;1.57e-08;61!CL:0002494;2.15e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.78e-21,250;CL:0000680,5.83e-20,58;CL:0000056,5.83e-20,58;CL:0000355,5.83e-20,58;CL:0000187,4.39e-19,55;CL:0000222,2.32e-17,121;CL:0000192,3.83e-17,43;CL:0000514,3.83e-17,43;CL:0000393,1.98e-16,61;CL:0000211,1.98e-16,61;CL:0000359,1.40e-14,32;CL:0000057,1.07e-11,76;CL:0002494,1.74e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;7.67e-12;43!CL:0000355;3.02e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.12e-17!82;UBERON:0004290!1.90e-17!70;UBERON:0000914!4.59e-17!83;UBERON:0002329!4.59e-17!83;UBERON:0003077!4.59e-17!83;UBERON:0003059!4.59e-17!83;UBERON:0007282!4.59e-17!83;UBERON:0009618!4.59e-17!83;UBERON:0007285!4.59e-17!83;UBERON:0001134!5.46e-16!61;UBERON:0002036!5.46e-16!61;UBERON:0003082!5.46e-16!61;UBERON:0002385!2.77e-14!63;UBERON:0001015!2.77e-14!63;UBERON:0000383!2.77e-14!63;UBERON:0002100!3.01e-14!216;UBERON:0000475!4.06e-14!365;UBERON:0001637!4.19e-13!42;UBERON:0003509!4.19e-13!42;UBERON:0004572!4.19e-13!42;UBERON:0005256!1.03e-12!143;UBERON:0003104!6.27e-12!238;UBERON:0009142!6.27e-12!238;UBERON:0002049!6.75e-12!79;UBERON:0007798!6.75e-12!79;UBERON:0004872!2.11e-11!84;UBERON:0000481!5.91e-11!347;UBERON:0000490!9.10e-11!138;UBERON:0000119!1.71e-10!312;UBERON:0000483!2.08e-10!309;UBERON:0003914!2.63e-10!118;UBERON:0004573!3.91e-10!33;UBERON:0004571!3.91e-10!33;UBERON:0001981!1.42e-09!60;UBERON:0007500!1.42e-09!60;UBERON:0004537!1.42e-09!60;UBERON:0006965!1.42e-09!60;UBERON:0000055!2.45e-09!69;UBERON:0004535!1.10e-08!110;UBERON:0001009!6.52e-08!113;UBERON:0000477!8.23e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.08e-09;42!UBERON:0003509;1.08e-09;42!UBERON:0004572;1.08e-09;42!UBERON:0004573;3.49e-09;33!UBERON:0004571;3.49e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.68e-20,78;UBERON:0000486,5.30e-20,83;UBERON:0002329,7.76e-20,71;UBERON:0003059,7.76e-20,71;UBERON:0007282,7.76e-20,71;UBERON:0004290,7.76e-20,71;UBERON:0009618,7.76e-20,71;UBERON:0003077,3.94e-19,72;UBERON:0007285,3.94e-19,72;UBERON:0007524,1.90e-18,73;UBERON:0001134,5.58e-18,62;UBERON:0002036,5.58e-18,62;UBERON:0003082,5.58e-18,62;UBERON:0002385,1.43e-16,64;UBERON:0001015,1.43e-16,64;UBERON:0000383,1.43e-16,64;UBERON:0001637,5.78e-14,42;UBERON:0003509,5.78e-14,42;UBERON:0004572,5.78e-14,42;UBERON:0002100,5.44e-13,199;UBERON:0003104,1.50e-12,160;UBERON:0009142,1.50e-12,160;UBERON:0005256,1.95e-12,122;UBERON:0000490,5.01e-12,148;UBERON:0004872,6.21e-12,83;UBERON:0002049,7.57e-12,78;UBERON:0007798,7.57e-12,78;UBERON:0004573,1.03e-10,33;UBERON:0004571,1.03e-10,33;UBERON:0003914,2.47e-10,117;UBERON:0004535,4.96e-10,109;UBERON:0007500,8.69e-10,59;UBERON:0001981,8.69e-10,59;UBERON:0004537,8.69e-10,59;UBERON:0006965,8.69e-10,59;UBERON:0000055,2.90e-09,68;UBERON:0001009,4.76e-09,112;UBERON:0000119,2.54e-08,309;UBERON:0000483,3.08e-08,306;UBERON:0003102,2.59e-07,99;UBERON:0002199,9.00e-07,46;UBERON:0002416,9.00e-07,46 | |||
|phase1_expression=2.18014055124668,0.856402095563933,1.26858963686374,2.00146596706261,2.23480547213644,3.48935409640147,2.53299878168311,8.2123583545488,3.13422753839806,2.21160542851358,4.88460817580699,0.655324116390517,1.05506791291381,1.48519623552056,1.98838425436749,7.39557661096953,2.41077811209591,3.65155045193687,4.87932798790507,1.10808952269109,4.28401451612931,2.82109249330279,1.14494394852423,1.50561867580173,1.12988375635323,0.229240217243854,0.328402357799783,0.393553906568396,0.786728553697808,0,0,8.27479102031034,6.024118375565,3.69754010166788,0.0774672005803016,1.42169232487422,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0.28769239232215,0.512321413058201,0,0,0.645484683583826,1.35426486594342,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0.526768169550154,0.196709770113833,0.786021525498329,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,0,0.270803863765016,0.25618263945135,0.520237390239513,0,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0.201606743224732,0.534880391567015,0.434473211648397,4.87613732627923,2.68280343881454,2.9408389224012,1.80719576192283,1.00267582127178,1.88300474649071,1.5905718941022,0.973269740605272,0.850813354476611,4.21285855178871,2.0202000709419,0.458426764241994,3.64295288292542,5.56176664176644,0.324547393654683,0,0.132957960518865,0.476981248610684,0,0,0.79504962946682,4.30117297553062,1.38856200643038,1.69592382577203,1.67799774483962,2.20094433552054,3.55291443112578,1.55050055501597,0.71153252537342,1.67360306382335,0.805658634218294,1.52054421143703,1.22031028774085,1.10298924103761,2.43042584364528,0.803697554556718,1.34717623575702,1.68917220724983,1.53316637465883,1.89853131913626,2.38162267109529,0,0,0.872188104285069,5.96366342034382,4.68532893158945,4.76673050927588,4.01571269048339,1.77334191099179,10.6528744027038,6.4049397437823,6.66002380726332,1.55605517699883,2.02066008104532,3.75962377160955,3.02714855289863,4.60940739583999,0.937285727335186,9.36480230490961,6.84566185853339,7.62188270814185,3.40560046066918,3.23745888736263,3.23036855415172,2.04154171254893,1.96534907698829,1.75653827998801,1.18800285728205,1.23633464639278,5.46096817162816,5.74894513452991,1.5150250255866,1.7516592782075,1.10825646193673,2.63386572528503,1.5324389789951,1.20190447125277,2.60894021268048,3.04962380671065,1.2813443329114,1.48352330811693,2.40072876867522,1.64884046781502,4.63752972082133,1.67505170698431,1.35021065793013,1.85130309806277,2.01947019395292,1.10459878370759,0.969876340912871,2.4850671476163,1.30977727695932,2.03472710772585,2.51239109112286,1.36373060295417,3.15485054927904,2.5614478287215,2.65059536642971,1.16193942869518,2.59152637538426,0.756962552626885,4.37972830890996,1.56449532329816,1.28648187638577,0,3.71494342425583,5.77503585335668,2.60274960087657,2.36018566109342,3.37415441836875,2.31617342738027,2.39667388501647,1.42362371466658,2.69662616320329,2.5508790466295,2.30848294167834,0.738155454624648,4.20725321410337,4.115740113314,4.41026134156626,1.26755034821831,0.982827216677626,0.590789906681404,0.882926198829301,0.737930631258681,1.54411029268673,2.85350742062426,4.49607013030478,1.60846355858609,1.48141512253647,0.977424915930974,7.27954349695705,4.3299402607582,0.463721619900307,2.58299127318808,0.433099343283221,1.38895653772983,1.71228737011138,5.53143078571493,4.29243081047436,0,0,0.445893486866185,4.68669169933885,2.01578553838631,3.54437743105966,1.34337784054272,2.3250715081117,1.15014803749563,0.985326475791887,0.176096868026452,0,0,0,0.888970520090367,0,3.51652341630141,5.13217338068116,1.7480673759565,2.10240140490742,1.71495859578347,1.34557301214433,2.1798003441664,1.0267360014933,4.52451005152222,14.3062578340753,7.607724773004,1.86156681609409,2.08014873822732,3.34369586540785,17.0218958427934,8.25908754949908,2.43062589218851,4.88359444852299,6.58592269424615,2.93162565864362,2.13235169245527,8.71147060226772,0.904318131178758,0,1.09970290300263,0,0,0,5.27174682081482,3.44585807502342,0,4.1986578933598,5.13690806375959,1.61154866915906,0.336255431980582,0,0,0.128343036279748,0.254094624222463,0,1.54657762555539,0.837581326671744,0,0,0,0,0.858840442033979,4.00136416847742,3.7977103317963,3.53550464602372,2.3195768543631,1.73472656537328,2.10854546986884,3.00946099727719,2.27407504055985,2.0694614258501,2.65690239414175,5.53107505625109,2.43274120510632,3.13281851940385,3.77457766191941,0,0.215714200818617,0.106727557803444,0.303127571446259,3.32870879020994,2.41912234663744,3.2254015016441,1.68808170616869,2.80660094433074,1.79394808957981,3.07024349440022,5.14732547659544,1.48418066444991,2.15893571323718,6.74734556189883,2.79232330446951,2.59627214591811,5.694308544538,0.604297247958111,6.01519410909855,0.828728900423067,2.41110341145674,4.37018803216121,3.01586154406675,1.80479845162965,1.5403067420883,2.35304930753057,1.46139224653261,1.79437769117889,2.27466768141793,4.08224892663638,1.94324324491925,0,1.35473218771926,4.01351819083883,1.27438136522519,2.49322802678617,1.56712328305525,0,0.261435451024901,0.256450125116389,0.656029291399411,1.62689197332152,0,2.19766715564024,1.48517099857058,2.87132768998086,3.25030123018261,3.21367859688319,1.7400729292582,3.38906957652218,4.60511024178389,3.1702411671442,2.0409846524972,2.75531718437034,2.64202544989913,2.8490251406956,1.98341898433174,2.88285101047659,2.04180339991335,1.0115778085555,8.36721988735114,6.61105928344344,1.3940745403212,2.7723022215848,9.04920251538937,1.73986598415015,6.11569923042936,16.459361975329,2.232950216158,2.53103539774981,4.76575484809562,6.65334257409468,1.28381696410176,2.54562598340749,4.70969184119538,1.97859703341646,4.94166653524899,2.5918728516051,6.67202189191943,19.021238540761,4.21258456238981,4.8763373908959,4.38684281336312,7.39551027297288,1.9109987597118,5.93902814205594,6.78048699721457,4.96228809191512,3.98063385144732,10.5228212460903,8.10285747973363,1.31178950409327,4.05820753925408,5.88664646389525,7.32408566583828,1.86434757865267,1.67023369722306,4.9933947207375,2.48332744849418,1.26664581178598,1.31717957183961,4.17420491142287,5.59895552391973,2.30933070541229,4.02181365321472,5.44454924306613,0.188287601553558,5.16606447205476,1.68471475667626,3.54744122829341,1.83778720165568,0,0,0,0,0,0,0,0,1.1750647824022,1.92495971052672,1.96032172784825,0.929015875628594,1.15415370381156,0.355709216742071,0,5.18906365725323,0.191505370132367,1.48171507906718,6.49243880549111,1.96558024679421,1.59764275323235,0.94007937463814,2.50634477090067,1.01575066680962,1.605880751037,1.41259795033733,0.851692475380653,0,0.921722292925374,0.671028323677248,0.500547425135725,0.390776190804081,0,1.23087398947712,1.89318974933188,0,1.4098700508785,1.12284324244932,0,0.121360521749513,0.445773537109913,0.568272293612826,0.71623345421307,0,0.307160702099232,0.994147647766298,0.844016498463076,0.890469640183247,2.30725423917463,0.211125408127993,0.19924798825107,0.276283915531148,0.755798243562828,0.511343412510774,0.369254416383208,1.86623752597084,0.449341755736634,0,0,0.295930216910801,2.3948309234694,1.11136990144637,0.969332746095218,0.834912883456661,3.99227596002388,1.5625665665114,1.04951999995435,0,2.27586896570999,1.27126825146383,1.89110145414349,3.79217710565611,1.16641845353302,1.38899995946634,0,0.241192877250816,0,0,0.591095237907095,0.438770794307945,3.81284622316466,0,0,1.48124672601102,0.922255617552241,0.359030577639089,0.977826347298073,0.31900115973192,0.824378340616761,0,0,3.92450640987562,2.49317522850235,5.63989151542952,4.70550082362575,1.67821586975843,1.3282761290693,1.27149263184303,0.421996129056054,0.326465616318295,0.424059214301822,0.865554558968364,0.995261931078505,0.0884575645033392,0.611030144933625,0,0.247127877893006,0.417687798021821,0.539209063845416,0,1.1713222286267,1.27718352450966,0.391329237864179,1.69946265673865,0.789168805698781,0,0.61214552326098,0.126373159256976,2.70582154946087,1.9700756365477,1.32930774541437,2.97892760287949,3.13932918407225,2.38944859545918,3.69992409838731,0.138674673013139,0.520679215005393,0.783939179315021,1.30588809870604,0.17472666824203,0.51595809741485,0.967563312890852,0.365446585430928,0.821154570532092,0.290967049465258,0.353024506766001,0.225980740780532,1.78154502040776,2.98071917554485,0.316553979779393,0.782205530939212,1.52301758477914,0.426905989478705,2.39771531498556,1.58499458869517,0.458146384663663,0.171594997861965,1.58460277786965,5.09435395818273,0.707082103850386,0.271808412147228,0.941425616810999,1.83596791745379,1.44475294950759,0.600420288709789,0.273810757783986,0,0.429765441419957,1.05154941711726,0.837847203816763,0,0,0.599037001496973,0,0.669514372325618,0.134366944973453,2.16179930125442,2.32991899054908,1.10296455230113,0.824158583811665,1.14586024552114,0.393709926058995,1.18542664892098,2.38568906942791,0.817220436669454,1.76828463311521,0.962776056180637,1.24632101408756,0,0,0.425246896606173,4.36065093879046,0.315222829196793,0.157363764404994,1.05600336519407,1.25501137532991,3.26255835443057,5.00286728461357,1.32418394073086,6.35671344136875,16.8329876543651,8.64221491201268,6.20515984207877,0,6.40321661844844,5.28202867534807,4.8724199353654,0.732761168390412,1.32506888912221,3.36135686540031,0.92562821219883,0.855434189421647,0.704815022316672,0,0.157204305099666,0.414239055347196,0.496166021811951,0.395223263795889,0.243585196761792,0,0,0.2506898940227,0,0,0.471162288750703,2.65820453990096,0.976210119215705,0.876336514945499,0.573409195690071,0.998361463831671,0.931446044120752,7.05578038174777,6.12403999014322,0.606596470166591,2.56918800190471,5.88164549245429,0.936669811613763,6.81128834470878,4.17913448083247,3.50569964770837,5.54805861502613,2.27283606330107,4.0250864280412,2.66943366478961,4.11912123114462,3.02461847526478,3.57505561340395,2.51353754982378,2.07085797312813,1.34940933649081,2.32894435314389,5.39118070193112,4.78515086204391,1.5652351854352,2.85489457094715,3.80805212168795,3.25496586563729,1.63663793282303,1.28892668450986,0.928067519756987,3.98095888698616,1.60011105865261,5.49433128292469,3.03074539889327,1.26184898228651,1.34833881285112,0.857766365499703,1.82696004375648,3.17388295717181,3.70435958918134,7.58683783970049,7.70082016650396,1.85280868296583,8.33279388399087,5.47736352432231,9.066959798733,3.88567613502067,0.512483037175893,1.0362910251936,3.3424595179512,0.553033744606923,0,0,0,2.29326894192489,2.45772908753719,1.05656061679314,0,1.17360902663555,0,1.70254786070051,1.65695355226657,2.09819261579167,1.24415452006595,0.895260599125562,1.1860729253635,2.83078695340614,5.02364335683264,2.54598794931038,0,1.23935764259002,1.11728983594649,5.72407831176153,0.23658523500376,0.80057074828547,0.705351887381368,2.4499638188256,0.899209151350433,1.41696576325585,0.159633859057151,1.43581454968528,0.252071696221718,1.45230230174858,0.484426936895553,0,2.84628383652974,3.53909170043221,1.65085738669511,0.577628330751691,3.05105676373734,1.3807198521202,7.95664888465099,0.150420656698515,2.62216589314576,0.781514011233092,1.04762677792569,2.29280684514135,0.147856086217045,0.945526184657525,0.781078098613847,0.826747186004736,0.697573912132975,0.546974809018219,0,0.496211178389294,5.62787981950786,2.93853583571069,0,0.336283722218824,3.03482802118316,1.36597314810779,0.0887023701626388,0.921871900446234,0,1.01954599465248,0.328863867814245,1.41832609060762,3.00324785108587,0.078493092850514,0.785577949580009,0.560544326627578,1.82631744101899,0.215927591218621,4.29976519098345,0.142953088353313,0.47404083519818,2.44106993273063,0.173858272302579,1.60342272946051,7.25256574570629,3.414369541879,1.38251932362818,0,1.65664801022791,1.44862788090568,1.69354820076372,3.89481676524885,0.31020638566432,0.955538938977433,0.223710863595585,0.490751168076215,0.609589624911347,0,0.205325613712494,3.4794432940146,0.971421986118279,0.701818390386317,1.98950775161368,2.02164154321867,0.5647304101948,1.31928620094515,1.50962843566674,0,0.437119121007915,1.88126918544609,0,0.471353094203252,1.17785080268967,0.891139200981258,2.113278637917,1.86919826156599,0.0939839179798536,0.0644578879735772,0.499705779624645,0.178553938605658,2.82315897372553,5.0552061014176,0.730336388246517,0.458729283404541,0.573358332605805,1.26217249754548,0.475940431336403,0.436350690340377,0,1.85997509083376,0,3.02838593486652,0.883164973845552,0.98339014767326,0.760191006068622,1.83579893535567,1.3360870263278,3.6757959813938,3.0084904715085,0.0757786982182394,0.803892390468535,0.829169439458779,0.413731983447581,0,0.952257725854961,0.193766729508018,0.248298857183432,2.35476911419288,0.0636471582781649,0,0.217716747896961,1.36893320434112,0.0673520530145875,0.215166616178029,0.99798106963804,0.325613074443898,2.34800160930974,1.9307228228694,1.07790242527904,0,0,0.813792356631477,0,0,0.641136984606466 | |||
|short_description=p4@EEF1D | |||
}} |
Revision as of 00:19, 23 January 2014
Short description: | p4@EEF1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EEF1D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526133, ENST00000531953_5end |
EntrezGene: | EEF1D |
HGNC: | 3211 |
UniProt: | E9PJ84E9PIP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.78e-21 | 250 |
muscle precursor cell | 5.83e-20 | 58 |
myoblast | 5.83e-20 | 58 |
multi-potent skeletal muscle stem cell | 5.83e-20 | 58 |
muscle cell | 4.39e-19 | 55 |
mesodermal cell | 2.32e-17 | 121 |
smooth muscle cell | 3.83e-17 | 43 |
smooth muscle myoblast | 3.83e-17 | 43 |
electrically responsive cell | 1.98e-16 | 61 |
electrically active cell | 1.98e-16 | 61 |
vascular associated smooth muscle cell | 1.40e-14 | 32 |
fibroblast | 1.07e-11 | 76 |
cardiocyte | 1.74e-07 | 16 |