FFCP PHASE1:Hg19::chr9:131904269..131904285,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5524 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9308 | |||
|TSSclassifier=strong | |||
|UniProt=B7ZBQ0 | |||
|association_with_transcript=0bp_to_ENST00000435132_5end | |||
|description=CAGE_peak_13_at_PPP2R4_5end | |||
|id=chr9:131904269..131904285,+ | |||
|ontology_enrichment_celltype=CL:0000183!8.04e-23!59;CL:0000680!6.93e-20!57;CL:0000056!6.93e-20!57;CL:0000355!6.93e-20!57;CL:0000187!1.23e-19!54;CL:0000393!9.00e-18!60;CL:0000211!9.00e-18!60;CL:0000222!1.65e-17!119;CL:0000055!1.12e-13!180;CL:0000192!1.99e-12!42;CL:0000514!1.99e-12!42;CL:1000497!2.96e-09!18;CL:0002518!2.96e-09!18;CL:1000507!4.17e-09!12;CL:1000494!4.17e-09!12;CL:0002321!1.09e-08!248;CL:0000220!1.82e-08!246;CL:1000449!2.40e-08!16;CL:0000359!1.65e-07!32;CL:0000188!3.07e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:1000507;4.86e-16;10!CL:1000494;4.86e-16;10!CL:1000497;1.89e-15;17!CL:0002518;1.89e-15;17!CL:1000449;7.57e-15;15!CL:0000188;1.10e-14;9!CL:0000187;5.55e-12;55!CL:0002681;1.10e-09;12!CL:0002584;1.10e-09;12!CL:0000393;4.27e-09;61!CL:0000211;4.27e-09;61!CL:0000669;9.66e-09;4!CL:0000737;3.61e-08;4!CL:0000064;5.20e-07;3!CL:0000067;5.20e-07;3!CL:0005012;5.20e-07;3!CL:0002304;5.20e-07;3!CL:0000746;9.18e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.11e-17,55;CL:1000507,1.96e-16,10;CL:1000494,1.96e-16,10;CL:0000680,2.33e-16,58;CL:0000056,2.33e-16,58;CL:0000355,2.33e-16,58;CL:1000497,6.95e-16,17;CL:0002518,6.95e-16,17;CL:0000188,1.47e-15,9;CL:1000449,2.63e-15,15;CL:0000393,3.58e-15,61;CL:0000211,3.58e-15,61;CL:0000222,4.64e-12,121;CL:0002681,4.26e-10,12;CL:0002584,4.26e-10,12;CL:0000669,8.09e-09,4;CL:0000737,2.49e-08,4;CL:0000064,6.41e-07,3;CL:0000067,6.41e-07,3;CL:0005012,6.41e-07,3;CL:0002304,6.41e-07,3;CL:0000746,7.65e-07,3;CL:0000513,7.65e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000355;1.49e-10;58!CL:0000513;9.18e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!6.35e-19!61;UBERON:0002036!6.35e-19!61;UBERON:0003082!6.35e-19!61;UBERON:0000119!6.64e-18!312;UBERON:0002385!1.39e-17!63;UBERON:0001015!1.39e-17!63;UBERON:0000383!1.39e-17!63;UBERON:0005256!3.80e-17!143;UBERON:0004290!5.86e-17!70;UBERON:0000483!1.24e-16!309;UBERON:0000914!3.81e-16!83;UBERON:0002329!3.81e-16!83;UBERON:0003077!3.81e-16!83;UBERON:0003059!3.81e-16!83;UBERON:0007282!3.81e-16!83;UBERON:0009618!3.81e-16!83;UBERON:0007285!3.81e-16!83;UBERON:0000475!5.02e-16!365;UBERON:0000481!1.72e-15!347;UBERON:0000486!5.16e-13!82;UBERON:0002100!6.74e-12!216;UBERON:0000477!6.90e-12!286;UBERON:0000490!1.56e-11!138;UBERON:0003914!1.63e-11!118;UBERON:0000025!1.63e-10!194;UBERON:0002049!5.39e-10!79;UBERON:0007798!5.39e-10!79;UBERON:0004111!6.34e-10!241;UBERON:0004876!2.67e-09!20;UBERON:0003103!4.06e-09!69;UBERON:0009773!4.17e-09!12;UBERON:0001231!4.17e-09!12;UBERON:0004810!4.17e-09!12;UBERON:0004535!5.73e-09!110;UBERON:0004872!7.25e-09!84;UBERON:0004211!2.40e-08!16;UBERON:0001285!2.40e-08!16;UBERON:0007684!2.40e-08!16;UBERON:0003220!2.40e-08!16;UBERON:0004208!2.40e-08!16;UBERON:0003104!3.28e-08!238;UBERON:0009142!3.28e-08!238;UBERON:0001009!3.62e-08!113;UBERON:0000080!3.99e-08!18;UBERON:0002120!3.99e-08!18;UBERON:0004875!3.99e-08!18;UBERON:0005721!3.99e-08!18;UBERON:0005754!3.99e-08!18;UBERON:0007297!3.99e-08!18;UBERON:0002113!4.31e-08!27;UBERON:0003918!4.31e-08!27;UBERON:0005095!4.31e-08!27;UBERON:0007687!4.31e-08!27;UBERON:0003887!1.49e-07!21;UBERON:0006555!1.79e-07!17;UBERON:0005103!1.79e-07!17;UBERON:0000083!1.79e-07!17;UBERON:0009201!1.79e-07!17;UBERON:0004819!1.79e-07!17;UBERON:0006553!1.79e-07!17;UBERON:0003074!1.79e-07!17;UBERON:0003060!1.79e-07!17;UBERON:0000058!2.70e-07!26;UBERON:0000489!3.49e-07!32;UBERON:0002200!3.71e-07!11;UBERON:0006876!3.71e-07!11;UBERON:0003064!5.64e-07!37;UBERON:0001981!6.81e-07!60;UBERON:0007500!6.81e-07!60;UBERON:0004537!6.81e-07!60;UBERON:0006965!6.81e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.86e-16;10!UBERON:0009773;4.86e-16;10!UBERON:0001231;4.86e-16;10!UBERON:0004810;4.86e-16;10!UBERON:0006555;7.57e-15;15!UBERON:0004819;7.57e-15;15!UBERON:0001285;7.57e-15;15!UBERON:0007684;7.57e-15;15!UBERON:0002203;1.07e-11;6!UBERON:0001768;1.07e-11;6!UBERON:0002200;1.07e-11;6!UBERON:0002113;1.11e-11;24!UBERON:0011143;1.11e-11;24!UBERON:0006876;4.38e-10;11!UBERON:0001225;1.10e-09;12!UBERON:0008987;1.10e-09;12!UBERON:0000353;1.85e-09;15!UBERON:0001134;3.14e-09;16!UBERON:0002036;3.14e-09;16!UBERON:0002385;4.30e-09;31!UBERON:0001015;4.30e-09;31!UBERON:0000383;4.30e-09;31!UBERON:0000489;4.56e-09;29!UBERON:0000488;6.45e-09;4!UBERON:0006554;1.18e-08;30!UBERON:0001008;1.18e-08;30!UBERON:0007625;4.30e-08;11!UBERON:0001801;8.80e-08;14!UBERON:0001851;2.05e-07;15!UBERON:0001456;3.40e-07;21!UBERON:0001778;5.20e-07;3!UBERON:0001775;5.20e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.10e-18,78;UBERON:0003104,1.96e-17,160;UBERON:0009142,1.96e-17,160;UBERON:0004810,1.96e-16,10;UBERON:0001134,4.49e-16,62;UBERON:0002036,4.49e-16,62;UBERON:0003082,4.49e-16,62;UBERON:0002329,2.10e-15,71;UBERON:0003059,2.10e-15,71;UBERON:0007282,2.10e-15,71;UBERON:0004290,2.10e-15,71;UBERON:0009618,2.10e-15,71;UBERON:0002385,2.54e-15,64;UBERON:0001015,2.54e-15,64;UBERON:0000383,2.54e-15,64;UBERON:0004211,2.63e-15,15;UBERON:0009773,2.63e-15,15;UBERON:0001231,2.63e-15,15;UBERON:0001285,2.63e-15,15;UBERON:0007684,2.63e-15,15;UBERON:0004208,2.63e-15,15;UBERON:0003077,4.52e-15,72;UBERON:0007285,4.52e-15,72;UBERON:0007524,9.49e-15,73;UBERON:0006555,3.69e-14,16;UBERON:0004819,3.69e-14,16;UBERON:0005256,6.22e-13,122;UBERON:0002113,1.63e-12,26;UBERON:0003918,1.63e-12,26;UBERON:0011143,1.63e-12,26;UBERON:0005095,1.63e-12,26;UBERON:0007687,1.63e-12,26;UBERON:0000119,2.20e-12,309;UBERON:0000486,5.62e-12,83;UBERON:0003103,2.25e-11,68;UBERON:0002203,3.12e-11,6;UBERON:0001768,3.12e-11,6;UBERON:0002200,3.12e-11,6;UBERON:0002100,3.28e-11,199;UBERON:0000483,9.98e-11,306;UBERON:0001225,4.26e-10,12;UBERON:0008987,4.26e-10,12;UBERON:0000489,7.14e-10,31;UBERON:0000353,7.29e-10,15;UBERON:0006876,1.16e-09,11;UBERON:0000488,8.09e-09,4;UBERON:0007625,3.70e-08,11;UBERON:0001851,9.91e-08,15;UBERON:0001801,1.45e-07,14;UBERON:0000490,2.53e-07,148;UBERON:0002417,4.43e-07,60;UBERON:0000916,4.43e-07,60;UBERON:0001778,6.41e-07,3;UBERON:0001775,6.41e-07,3 | |||
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| |||
|short_description=p13@PPP2R4 | |||
}} |
Revision as of 03:38, 23 January 2014
Short description: | p13@PPP2R4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PPP2R4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000435132_5end |
EntrezGene: | PPP2R4 |
HGNC: | 9308 |
UniProt: | B7ZBQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.11e-17 | 55 |
kidney tubule cell | 1.96e-16 | 10 |
nephron tubule epithelial cell | 1.96e-16 | 10 |
muscle precursor cell | 2.33e-16 | 58 |
myoblast | 2.33e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.33e-16 | 58 |
kidney cell | 6.95e-16 | 17 |
kidney epithelial cell | 6.95e-16 | 17 |
cell of skeletal muscle | 1.47e-15 | 9 |
epithelial cell of nephron | 2.63e-15 | 15 |
electrically responsive cell | 3.58e-15 | 61 |
electrically active cell | 3.58e-15 | 61 |
mesodermal cell | 4.64e-12 | 121 |
kidney cortical cell | 4.26e-10 | 12 |
renal cortical epithelial cell | 4.26e-10 | 12 |
pericyte cell | 8.09e-09 | 4 |
striated muscle cell | 2.49e-08 | 4 |
ciliated cell | 6.41e-07 | 3 |
ciliated epithelial cell | 6.41e-07 | 3 |
multi-ciliated epithelial cell | 6.41e-07 | 3 |
non-pigmented ciliary epithelial cell | 6.41e-07 | 3 |
cardiac muscle cell | 7.65e-07 | 3 |
cardiac muscle myoblast | 7.65e-07 | 3 |