FFCP PHASE1:Hg19::chr9:139518408..139518428,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:139518408..139518428,- | |||
|id=chr9:139518408..139518428,- | |||
|ontology_enrichment_celltype=CL:0002076!2.62e-29!43;CL:0000223!2.15e-21!59;CL:0002368!6.33e-18!13;CL:0002251!1.64e-16!21;CL:0000066!1.37e-13!254;CL:0002159!6.59e-11!13;CL:0002202!1.17e-09!9;CL:0002632!1.17e-09!9;CL:0000076!4.77e-09!62;CL:0000622!1.58e-08!5;CL:0002623!1.67e-08!3;CL:0002328!2.04e-08!3;CL:0000068!3.60e-08!3;CL:0000069!3.60e-08!3;CL:0000307!3.60e-08!3;CL:0000377!3.60e-08!3;CL:0000154!4.35e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002327;1.88e-18;4!CL:0002368;5.96e-10;13!CL:0002076;1.36e-09;42!CL:0002252;3.53e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.83e-18,4;CL:0002076,4.64e-11,42;CL:0002368,6.18e-10,13;CL:0000223,8.01e-10,58;CL:0002252,2.77e-09,1;CL:0000066,5.01e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0004874;3.53e-09;1!CL:0000223;4.30e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!1.97e-22!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;3.53e-09;1!DOID:3149;3.53e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.15e-09,1;DOID:3149,4.15e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!4.85e-17!72;UBERON:0004119!9.43e-13!169;UBERON:0000925!9.43e-13!169;UBERON:0006595!9.43e-13!169;UBERON:0000161!7.39e-12!35;UBERON:0000166!1.10e-11!21;UBERON:0000065!2.08e-11!53;UBERON:0003729!2.23e-11!5;UBERON:0007196!5.69e-10!14;UBERON:0001558!5.69e-10!14;UBERON:0003343!1.12e-09!4;UBERON:0004785!1.12e-09!4;UBERON:0000165!1.17e-09!28;UBERON:0000930!1.17e-09!28;UBERON:0000344!1.51e-08!12;UBERON:0004815!2.04e-08!3;UBERON:0002031!2.04e-08!3;UBERON:0003126!2.25e-08!7;UBERON:0001005!2.25e-08!7;UBERON:0003102!2.85e-08!95;UBERON:0001007!6.36e-08!155;UBERON:0001555!6.36e-08!155;UBERON:0007026!6.36e-08!155;UBERON:0001444!1.25e-07!48;UBERON:0000974!1.26e-07!10;UBERON:0005178!1.33e-07!34;UBERON:0002224!1.33e-07!34;UBERON:0005181!2.60e-07!35;UBERON:0000072!8.23e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.88e-18;4!UBERON:0007029;3.53e-09;1!UBERON:0000989;3.53e-09;1!UBERON:0008811;3.53e-09;1!UBERON:0000014;8.88e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.83e-18,4;UBERON:0005333,1.83e-18,4;UBERON:0008425,1.83e-18,4;UBERON:0005311,1.83e-18,4;UBERON:0000076,1.65e-09,8;UBERON:0000989,3.25e-09,1;UBERON:0008811,3.25e-09,1;UBERON:0006258,3.25e-09,1;UBERON:0005876,3.25e-09,1;UBERON:0004874,3.25e-09,1;UBERON:0007029,3.83e-09,1;UBERON:0000014,1.00e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82147644146271,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.219500570817251,2.24803506515239,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.503946384596579,0,1.79117045405697,1.16253575405585,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.828728900423067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,0.576570202095319,2.67986696238627,1.71968227454435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0.670302275535787,1.08890984861323,0,0.43050537267123,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38769356535489,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0.796554137998498,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,11.2933232865669,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08728009223433,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.261177619741208,0.17472666824203,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,8.51182150013745,0,1.34173875039706,0,0.0524545881349981,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0.979156554036111,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51479505104718,0.353909170043221,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,1.14986184875636,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0.316027223465453,0,0,0,0.62164849248911,2.56077715640925,0.691259661814092,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,1.45713297917742,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14264726326789,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0.870866991587845,0,0.404112318087525,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr9:139518408..139518428,- | |||
}} |
Revision as of 04:08, 23 January 2014
Short description: | p@chr9:139518408..139518428, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:139518408..139518428, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.83e-18 | 4 |
endo-epithelial cell | 4.64e-11 | 42 |
respiratory epithelial cell | 6.18e-10 | 13 |
endodermal cell | 8.01e-10 | 58 |
epithelial cell of esophagus | 2.77e-09 | 1 |
epithelial cell | 5.01e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.83e-18 | 4 |
mammary bud | 1.83e-18 | 4 |
mammary ridge | 1.83e-18 | 4 |
mammary placode | 1.83e-18 | 4 |
external ectoderm | 1.65e-09 | 8 |
penis | 3.25e-09 | 1 |
intromittent organ | 3.25e-09 | 1 |
lateral plate mesenchyme | 3.25e-09 | 1 |
undifferentiated genital tubercle | 3.25e-09 | 1 |
somatopleure | 3.25e-09 | 1 |
surface | 3.83e-09 | 1 |
zone of skin | 1.00e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.15e-09 | 1 |
keratoacanthoma | 4.15e-09 | 1 |