Personal tools

DOID:114: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{DOID
{{DOID
|id=DOID:114
|alt_id=
|name=heart disease
|namespace=disease_ontology
|def=
|xref=ICD9CM:429.9;;MSH:D006331;;NCI:C3079;;SNOMEDCT_2010_1_31:155263000;;SNOMEDCT_2010_1_31:194707003;;SNOMEDCT_2010_1_31:195152001;;SNOMEDCT_2010_1_31:266275004;;SNOMEDCT_2010_1_31:266311004;;SNOMEDCT_2010_1_31:56265001;;UMLS_CUI:C0018799
|is_a=DOID:1287
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:114
|is_a=DOID:1287
|is_obsolete=
|located_in=
|located_in=
|name=heart disease
|namespace=disease_ontology
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=ICD9CM:429.9;;MSH:D006331;;NCI:C3079;;SNOMEDCT_2010_1_31:155263000;;SNOMEDCT_2010_1_31:194707003;;SNOMEDCT_2010_1_31:195152001;;SNOMEDCT_2010_1_31:266275004;;SNOMEDCT_2010_1_31:266311004;;SNOMEDCT_2010_1_31:56265001;;UMLS_CUI:C0018799
}}
}}

Revision as of 10:32, 12 September 2014

Name:heart disease
Namespace:disease_ontology
Xrefs:
links:

ICD9CM:429.9
MSH:D006331
NCI:C3079
SNOMEDCT_2010_1_31:155263000
SNOMEDCT_2010_1_31:194707003
SNOMEDCT_2010_1_31:195152001
SNOMEDCT_2010_1_31:266275004
SNOMEDCT_2010_1_31:266311004
SNOMEDCT_2010_1_31:56265001

UMLS_CUI:C0018799

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1287(cardiovascular system disease)



Children


is a:FF:10051-101G6 (heart, adult, diseased, donor1),DOID:3978 (extrinsic cardiomyopathy)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:114 (heart disease), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.61e-131FFCP PHASE1:Hg19::chr2:40656537..40656548,-#_2280c9a6a00a980436f525507650877fp30@SLC8A1
4.61e-131FFCP PHASE2:Hg19::chr2:40656537..40656548,-#_2280c9a6a00a980436f525507650877fp30@SLC8A1
8.99e-131FFCP PHASE2:Hg19::chr1:202431836..202431849,+#_d6bb89f7adafd98b6342cb3b085b351dp18@PPP1R12B
8.99e-131FFCP PHASE1:Hg19::chr1:202431911..202431922,+#_d6bb89f7adafd98b6342cb3b085b351dp12@PPP1R12B
8.99e-131FFCP PHASE2:Hg19::chr1:202431911..202431922,+#_d6bb89f7adafd98b6342cb3b085b351dp12@PPP1R12B
8.99e-131FFCP PHASE1:Hg19::chr1:202431836..202431849,+#_d6bb89f7adafd98b6342cb3b085b351dp18@PPP1R12B
1.75e-130FFCP PHASE1:Hg19::chr14:23863067..23863074,+#_a2d8c934163907faf4954f9c8f8c068cp@chr14:23863067..23863074, +
1.75e-130FFCP PHASE1:Hg19::chr14:23863078..23863082,+#_a2d8c934163907faf4954f9c8f8c068cp@chr14:23863078..23863082, +
1.75e-130FFCP PHASE2:Hg19::chr14:23863067..23863074,+#_a2d8c934163907faf4954f9c8f8c068cp@chr14:23863067..23863074, +
1.75e-130FFCP PHASE2:Hg19::chr14:23863078..23863082,+#_a2d8c934163907faf4954f9c8f8c068cp@chr14:23863078..23863082, +
5.68e-99FFCP PHASE1:Hg19::chr16:46791398..46791405,-#_a936bc30d63af51b70db0c0a9bb98425p@chr16:46791398..46791405, -
5.68e-99FFCP PHASE1:Hg19::chr7:44733756..44733765,+#_a936bc30d63af51b70db0c0a9bb98425p@chr7:44733756..44733765, +
5.68e-99FFCP PHASE2:Hg19::chr7:44733756..44733765,+#_a936bc30d63af51b70db0c0a9bb98425p@chr7:44733756..44733765, +
5.68e-99FFCP PHASE2:Hg19::chr16:46791398..46791405,-#_a936bc30d63af51b70db0c0a9bb98425p@chr16:46791398..46791405, -
9.38e-99FFCP PHASE1:Hg19::chr6:36812270..36812277,-#_be885138d87dfcf3290437ff7ba05c64p@chr6:36812270..36812277, -
9.38e-99FFCP PHASE2:Hg19::chr6:36812270..36812277,-#_be885138d87dfcf3290437ff7ba05c64p@chr6:36812270..36812277, -
9.38e-99FFCP PHASE1:Hg19::chr1:202431859..202431868,+#_be885138d87dfcf3290437ff7ba05c64p20@PPP1R12B
9.38e-99FFCP PHASE2:Hg19::chr1:202431859..202431868,+#_be885138d87dfcf3290437ff7ba05c64p20@PPP1R12B
9.38e-99FFCP PHASE2:Hg19::chr14:23862916..23862925,-#_be885138d87dfcf3290437ff7ba05c64p@chr14:23862916..23862925, -
9.38e-99FFCP PHASE1:Hg19::chr1:16340619..16340636,+#_be885138d87dfcf3290437ff7ba05c64p@chr1:16340619..16340636, +
9.38e-99FFCP PHASE2:Hg19::chr1:16340619..16340636,+#_be885138d87dfcf3290437ff7ba05c64p@chr1:16340619..16340636, +
9.38e-99FFCP PHASE1:Hg19::chr14:23862916..23862925,-#_be885138d87dfcf3290437ff7ba05c64p@chr14:23862916..23862925, -
1.55e-98FFCP PHASE2:Hg19::chr4:74508559..74508597,+#_4c7b1a5aa3c0f817125678c4cb135a59p@chr4:74508559..74508597, +
1.55e-98FFCP PHASE1:Hg19::chr14:23862685..23862696,+#_4c7b1a5aa3c0f817125678c4cb135a59p@chr14:23862685..23862696, +
1.55e-98FFCP PHASE2:Hg19::chr8:66701339..66701344,-#_4c7b1a5aa3c0f817125678c4cb135a59p29@PDE7A
1.55e-98FFCP PHASE1:Hg19::chr14:23863407..23863418,-#_4c7b1a5aa3c0f817125678c4cb135a59p@chr14:23863407..23863418, -
1.55e-98FFCP PHASE2:Hg19::chr14:23876391..23876406,-#_4c7b1a5aa3c0f817125678c4cb135a59p4@MYH6
1.55e-98FFCP PHASE1:Hg19::chr20:36776599..36776606,-#_4c7b1a5aa3c0f817125678c4cb135a59p@chr20:36776599..36776606, -
1.55e-98FFCP PHASE2:Hg19::chr20:36776599..36776606,-#_4c7b1a5aa3c0f817125678c4cb135a59p@chr20:36776599..36776606, -
1.55e-98FFCP PHASE2:Hg19::chr15:35086267..35086272,-#_4c7b1a5aa3c0f817125678c4cb135a59p@chr15:35086267..35086272, -
1.55e-98FFCP PHASE2:Hg19::chr14:23862659..23862665,-#_4c7b1a5aa3c0f817125678c4cb135a59p@chr14:23862659..23862665, -
1.55e-98FFCP PHASE1:Hg19::chr14:23876391..23876406,-#_4c7b1a5aa3c0f817125678c4cb135a59p4@MYH6
1.55e-98FFCP PHASE2:Hg19::chr14:23862685..23862696,+#_4c7b1a5aa3c0f817125678c4cb135a59p@chr14:23862685..23862696, +
1.55e-98FFCP PHASE1:Hg19::chr15:35086267..35086272,-#_4c7b1a5aa3c0f817125678c4cb135a59p@chr15:35086267..35086272, -
1.55e-98FFCP PHASE2:Hg19::chr14:23863407..23863418,-#_4c7b1a5aa3c0f817125678c4cb135a59p@chr14:23863407..23863418, -
1.55e-98FFCP PHASE1:Hg19::chr14:23862659..23862665,-#_4c7b1a5aa3c0f817125678c4cb135a59p@chr14:23862659..23862665, -
1.55e-98FFCP PHASE1:Hg19::chr4:74508559..74508597,+#_4c7b1a5aa3c0f817125678c4cb135a59p@chr4:74508559..74508597, +
1.55e-98FFCP PHASE1:Hg19::chr8:66701339..66701344,-#_4c7b1a5aa3c0f817125678c4cb135a59p29@PDE7A
2.56e-98FFCP PHASE1:Hg19::chr15:44172060..44172067,-#_2cf336655440b5d80e55e7b63b2f853ep@chr15:44172060..44172067, -
2.56e-98FFCP PHASE2:Hg19::chr15:44172060..44172067,-#_2cf336655440b5d80e55e7b63b2f853ep@chr15:44172060..44172067, -
4.22e-98FFCP PHASE1:Hg19::chr2:220495902..220495903,+#_df4f6652a563e2b112727465690c3172p25@SLC4A3
4.22e-98FFCP PHASE1:Hg19::chr14:23862577..23862585,-#_df4f6652a563e2b112727465690c3172p5@MYH6
4.22e-98FFCP PHASE2:Hg19::chr2:220495902..220495903,+#_df4f6652a563e2b112727465690c3172p25@SLC4A3
4.22e-98FFCP PHASE2:Hg19::chr14:23862577..23862585,-#_df4f6652a563e2b112727465690c3172p5@MYH6
1.05e-79FFCP PHASE2:Hg19::chr1:6063096..6063104,+#_7f923658f84e4170fc76c7d645788c79p@chr1:6063096..6063104, +
1.05e-79FFCP PHASE2:Hg19::chr14:23865605..23865611,-#_7f923658f84e4170fc76c7d645788c79p@chr14:23865605..23865611, -
1.05e-79FFCP PHASE1:Hg19::chr14:23865605..23865611,-#_7f923658f84e4170fc76c7d645788c79p@chr14:23865605..23865611, -
1.05e-79FFCP PHASE1:Hg19::chr1:6063096..6063104,+#_7f923658f84e4170fc76c7d645788c79p@chr1:6063096..6063104, +
1.56e-79FFCP PHASE2:Hg19::chr16:46791436..46791443,-#_6dafa052ab32759f00b86e7257111b52p@chr16:46791436..46791443, -
1.56e-79FFCP PHASE1:Hg19::chr12:825768..825781,-#_6dafa052ab32759f00b86e7257111b52p@chr12:825768..825781, -
1.56e-79FFCP PHASE1:Hg19::chr14:23865587..23865596,-#_6dafa052ab32759f00b86e7257111b52p@chr14:23865587..23865596, -
1.56e-79FFCP PHASE1:Hg19::chr1:202432165..202432174,+#_6dafa052ab32759f00b86e7257111b52p30@PPP1R12B
1.56e-79FFCP PHASE1:Hg19::chr16:46791436..46791443,-#_6dafa052ab32759f00b86e7257111b52p@chr16:46791436..46791443, -
1.56e-79FFCP PHASE2:Hg19::chr1:202432165..202432174,+#_6dafa052ab32759f00b86e7257111b52p30@PPP1R12B
1.56e-79FFCP PHASE2:Hg19::chr12:825768..825781,-#_6dafa052ab32759f00b86e7257111b52p@chr12:825768..825781, -
1.56e-79FFCP PHASE2:Hg19::chr14:23865587..23865596,-#_6dafa052ab32759f00b86e7257111b52p@chr14:23865587..23865596, -
2.34e-79FFCP PHASE2:Hg19::chr14:23857002..23857008,-#_3ab20dbe2c76908dbad269e26bdd5ec4p@chr14:23857002..23857008, -
2.34e-79FFCP PHASE1:Hg19::chr2:106054837..106054867,+#_3ab20dbe2c76908dbad269e26bdd5ec4p@chr2:106054837..106054867, +
2.34e-79FFCP PHASE1:Hg19::chr14:23856854..23856864,-#_3ab20dbe2c76908dbad269e26bdd5ec4p@chr14:23856854..23856864, -
2.34e-79FFCP PHASE2:Hg19::chr14:23863529..23863540,-#_3ab20dbe2c76908dbad269e26bdd5ec4p@chr14:23863529..23863540, -
2.34e-79FFCP PHASE2:Hg19::chr2:106054837..106054867,+#_3ab20dbe2c76908dbad269e26bdd5ec4p@chr2:106054837..106054867, +
2.34e-79FFCP PHASE2:Hg19::chr14:23862653..23862669,+#_3ab20dbe2c76908dbad269e26bdd5ec4p@chr14:23862653..23862669, +
2.34e-79FFCP PHASE1:Hg19::chr14:23857002..23857008,-#_3ab20dbe2c76908dbad269e26bdd5ec4p@chr14:23857002..23857008, -
2.34e-79FFCP PHASE1:Hg19::chr14:23863529..23863540,-#_3ab20dbe2c76908dbad269e26bdd5ec4p@chr14:23863529..23863540, -
2.34e-79FFCP PHASE1:Hg19::chr14:23862653..23862669,+#_3ab20dbe2c76908dbad269e26bdd5ec4p@chr14:23862653..23862669, +
2.34e-79FFCP PHASE2:Hg19::chr14:23856854..23856864,-#_3ab20dbe2c76908dbad269e26bdd5ec4p@chr14:23856854..23856864, -
3.49e-79FFCP PHASE2:Hg19::chr2:220491920..220491931,+#_f5ab6c480ebf8756678521abc30585aap15@SLC4A3
3.49e-79FFCP PHASE1:Hg19::chr12:20425310..20425314,+#_f5ab6c480ebf8756678521abc30585aap@chr12:20425310..20425314, +
3.49e-79FFCP PHASE2:Hg19::chr12:20425310..20425314,+#_f5ab6c480ebf8756678521abc30585aap@chr12:20425310..20425314, +
3.49e-79FFCP PHASE1:Hg19::chr2:220491920..220491931,+#_f5ab6c480ebf8756678521abc30585aap15@SLC4A3
5.22e-79FFCP PHASE1:Hg19::chr14:23862929..23862940,-#_89ab08075099b65228abe5427f866b0cp@chr14:23862929..23862940, -
5.22e-79FFCP PHASE1:Hg19::chr4:186598476..186598485,+#_89ab08075099b65228abe5427f866b0cp@chr4:186598476..186598485, +
5.22e-79FFCP PHASE2:Hg19::chr4:186598476..186598485,+#_89ab08075099b65228abe5427f866b0cp@chr4:186598476..186598485, +
5.22e-79FFCP PHASE1:Hg19::chr22:46971635..46971645,+#_89ab08075099b65228abe5427f866b0cp8@GRAMD4
5.22e-79FFCP PHASE1:Hg19::chr1:231983510..231983519,-#_89ab08075099b65228abe5427f866b0cp@chr1:231983510..231983519, -
5.22e-79FFCP PHASE2:Hg19::chr14:23862929..23862940,-#_89ab08075099b65228abe5427f866b0cp@chr14:23862929..23862940, -
5.22e-79FFCP PHASE2:Hg19::chr22:46971635..46971645,+#_89ab08075099b65228abe5427f866b0cp8@GRAMD4
5.22e-79FFCP PHASE2:Hg19::chr1:231983510..231983519,-#_89ab08075099b65228abe5427f866b0cp@chr1:231983510..231983519, -
1.16e-78FFCP PHASE2:Hg19::chr6:163507565..163507584,+#_e46528bd4fff76ef24de01136097e114p@chr6:163507565..163507584, +
1.16e-78FFCP PHASE2:Hg19::chr5:148803658..148803668,+#_e46528bd4fff76ef24de01136097e114p@chr5:148803658..148803668, +
1.16e-78FFCP PHASE1:Hg19::chr6:163507565..163507584,+#_e46528bd4fff76ef24de01136097e114p@chr6:163507565..163507584, +
1.16e-78FFCP PHASE1:Hg19::chr5:148803658..148803668,+#_e46528bd4fff76ef24de01136097e114p@chr5:148803658..148803668, +
7.41e-67FFCP PHASE1:Hg19::chr1:6063076..6063088,+#_fd47280cef9e143bdb1a9e094832e2cfp@chr1:6063076..6063088, +
7.41e-67FFCP PHASE2:Hg19::chr1:6063076..6063088,+#_fd47280cef9e143bdb1a9e094832e2cfp@chr1:6063076..6063088, +
1.04e-66FFCP PHASE2:Hg19::chr9:112191317..112191328,-#_1cef6862fd034260156f94177f439117p7@PTPN3
1.04e-66FFCP PHASE1:Hg19::chr2:21265280..21265290,-#_1cef6862fd034260156f94177f439117p@chr2:21265280..21265290, -
1.04e-66FFCP PHASE2:Hg19::chr2:21265280..21265290,-#_1cef6862fd034260156f94177f439117p@chr2:21265280..21265290, -
1.04e-66FFCP PHASE1:Hg19::chr9:112191317..112191328,-#_1cef6862fd034260156f94177f439117p7@PTPN3
1.45e-66FFCP PHASE1:Hg19::chr4:186583393..186583400,-#_549341cf02d9a084d8a0448f7e9d3699p66@SORBS2
1.45e-66FFCP PHASE2:Hg19::chr14:23862593..23862603,-#_549341cf02d9a084d8a0448f7e9d3699p3@MYH6
1.45e-66FFCP PHASE1:Hg19::chr8:98078328..98078337,+#_549341cf02d9a084d8a0448f7e9d3699p@chr8:98078328..98078337, +
1.45e-66FFCP PHASE2:Hg19::chr14:23857011..23857025,-#_549341cf02d9a084d8a0448f7e9d3699p@chr14:23857011..23857025, -
1.45e-66FFCP PHASE2:Hg19::chr11:47366972..47366980,+#_549341cf02d9a084d8a0448f7e9d3699p@chr11:47366972..47366980, +
1.45e-66FFCP PHASE2:Hg19::chr4:186583393..186583400,-#_549341cf02d9a084d8a0448f7e9d3699p66@SORBS2
1.45e-66FFCP PHASE2:Hg19::chr8:98078328..98078337,+#_549341cf02d9a084d8a0448f7e9d3699p@chr8:98078328..98078337, +
1.45e-66FFCP PHASE2:Hg19::chr14:23865952..23865990,-#_549341cf02d9a084d8a0448f7e9d3699p@chr14:23865952..23865990, -
1.45e-66FFCP PHASE1:Hg19::chr14:23862593..23862603,-#_549341cf02d9a084d8a0448f7e9d3699p3@MYH6
1.45e-66FFCP PHASE1:Hg19::chr14:23857011..23857025,-#_549341cf02d9a084d8a0448f7e9d3699p@chr14:23857011..23857025, -
1.45e-66FFCP PHASE1:Hg19::chr14:23865952..23865990,-#_549341cf02d9a084d8a0448f7e9d3699p@chr14:23865952..23865990, -
1.45e-66FFCP PHASE1:Hg19::chr11:47366972..47366980,+#_549341cf02d9a084d8a0448f7e9d3699p@chr11:47366972..47366980, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=DOID:114&oldid=3272282"