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{{DOID
{{DOID
|id=DOID:3112
|alt_id=DOID:5596
|name=papillary adenocarcinoma
|namespace=disease_ontology
|def="An adenocarcinoma that derives_from epithelial cells originating in glandular tissue, which form complex papillary structures and exhibit compressive, destructive growth that replaces the normal tissue." [url:http://en.wikipedia.org/wiki/Papillary_adenocarcinoma]
|xref=MSH:D000231;;NCI:C2853;;SNOMEDCT_2010_1_31:189621008;;SNOMEDCT_2010_1_31:4797003;;SNOMEDCT_2010_1_31:64524002;;UMLS_CUI:C0001420;;UMLS_CUI:C1321863
|is_a=DOID:299
|synonym="Infiltrating and papillary adenocarcinoma" EXACT [SNOMEDCT_2005_07_31:64524002];;"infiltrating papillary adenocarcinoma" EXACT [];;"Papillary adenocarcinoma" EXACT [NCI2004_11_17:C2853];;"Papillary adenocarcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:4797003];;"Papillary adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189621008]
|comment=
|comment=
|alt_id=DOID:5596
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An adenocarcinoma that derives_from epithelial cells originating in glandular tissue, which form complex papillary structures and exhibit compressive, destructive growth that replaces the normal tissue." [url:http://en.wikipedia.org/wiki/Papillary_adenocarcinoma]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:3112
|is_a=DOID:299
|is_obsolete=
|located_in=
|located_in=
|name=papillary adenocarcinoma
|namespace=disease_ontology
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="Infiltrating and papillary adenocarcinoma" EXACT [SNOMEDCT_2005_07_31:64524002];;"infiltrating papillary adenocarcinoma" EXACT [];;"Papillary adenocarcinoma" EXACT [NCI2004_11_17:C2853];;"Papillary adenocarcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:4797003];;"Papillary adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189621008]
|union_of=
|xref=MSH:D000231;;NCI:C2853;;SNOMEDCT_2010_1_31:189621008;;SNOMEDCT_2010_1_31:4797003;;SNOMEDCT_2010_1_31:64524002;;UMLS_CUI:C0001420;;UMLS_CUI:C1321863
}}
}}

Revision as of 10:34, 12 September 2014

Name:papillary adenocarcinoma
Namespace:disease_ontology
Definition:"An adenocarcinoma that derives_from epithelial cells originating in glandular tissue, which form complex papillary structures and exhibit compressive, destructive growth that replaces the normal tissue." [url:http://en.wikipedia.org/wiki/Papillary_adenocarcinoma]
Xrefs:
links:

MSH:D000231
NCI:C2853
SNOMEDCT_2010_1_31:189621008
SNOMEDCT_2010_1_31:4797003
SNOMEDCT_2010_1_31:64524002
UMLS_CUI:C0001420

UMLS_CUI:C1321863
Synonyms: "Infiltrating and papillary adenocarcinoma" EXACT [SNOMEDCT_2005_07_31:64524002]
"infiltrating papillary adenocarcinoma" EXACT []
"Papillary adenocarcinoma" EXACT [NCI2004_11_17:C2853]
"Papillary adenocarcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:4797003]
"Papillary adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189621008]
Alt_id: DOID:5596

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:299(adenocarcinoma)



Children


is a:FF:10437-106E5 (papillary adenocarcinoma cell line:8505C)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3112 (papillary adenocarcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr20:9013530..9013537,-#_fc110bead4237c107196cececee36511p@chr20:9013530..9013537, -
5.42e-195FFCP PHASE2:Hg19::chr3:677267..677274,+#_fc110bead4237c107196cececee36511p@chr3:677267..677274, +
5.42e-195FFCP PHASE1:Hg19::chr3:677239..677244,+#_fc110bead4237c107196cececee36511p@chr3:677239..677244, +
5.42e-195FFCP PHASE1:Hg19::chr20:9013530..9013537,-#_fc110bead4237c107196cececee36511p@chr20:9013530..9013537, -
5.42e-195FFCP PHASE1:Hg19::chr3:677267..677274,+#_fc110bead4237c107196cececee36511p@chr3:677267..677274, +
5.42e-195FFCP PHASE2:Hg19::chr3:677239..677244,+#_fc110bead4237c107196cececee36511p@chr3:677239..677244, +
9.37e-99FFCP PHASE2:Hg19::chr11:36376725..36376731,+#_4ae3f9975cc24e75794beb71a2c623f3p@chr11:36376725..36376731, +
9.37e-99FFCP PHASE2:Hg19::chr4:14094655..14094663,+#_4ae3f9975cc24e75794beb71a2c623f3p@chr4:14094655..14094663, +
9.37e-99FFCP PHASE1:Hg19::chr11:36376725..36376731,+#_4ae3f9975cc24e75794beb71a2c623f3p@chr11:36376725..36376731, +
9.37e-99FFCP PHASE1:Hg19::chr6:38754506..38754523,+#_4ae3f9975cc24e75794beb71a2c623f3p@chr6:38754506..38754523, +
9.37e-99FFCP PHASE1:Hg19::chr4:14094655..14094663,+#_4ae3f9975cc24e75794beb71a2c623f3p@chr4:14094655..14094663, +
9.37e-99FFCP PHASE2:Hg19::chr6:38754506..38754523,+#_4ae3f9975cc24e75794beb71a2c623f3p@chr6:38754506..38754523, +
2.55e-98FFCP PHASE2:Hg19::chr6:56765738..56765745,-#_78b9b1811951bfe0ae76549b0d2b7766p@chr6:56765738..56765745, -
2.55e-98FFCP PHASE1:Hg19::chr9:81496646..81496675,+#_78b9b1811951bfe0ae76549b0d2b7766p@chr9:81496646..81496675, +
2.55e-98FFCP PHASE2:Hg19::chr9:81496646..81496675,+#_78b9b1811951bfe0ae76549b0d2b7766p@chr9:81496646..81496675, +
2.55e-98FFCP PHASE1:Hg19::chr6:56765738..56765745,-#_78b9b1811951bfe0ae76549b0d2b7766p@chr6:56765738..56765745, -
2.39e-66FFCP PHASE2:Hg19::chr19:54545810..54545821,-#_4e919082feca5c0237750a7f6f2b3c20p@chr19:54545810..54545821, -
2.39e-66FFCP PHASE1:Hg19::chr18:5540365..5540373,-#_4e919082feca5c0237750a7f6f2b3c20p22@EPB41L3
2.39e-66FFCP PHASE1:Hg19::chr8:81124000..81124005,-#_4e919082feca5c0237750a7f6f2b3c20p@chr8:81124000..81124005, -
2.39e-66FFCP PHASE1:Hg19::chr18:31950808..31950811,-#_4e919082feca5c0237750a7f6f2b3c20p@chr18:31950808..31950811, -
2.39e-66FFCP PHASE2:Hg19::chr18:5540365..5540373,-#_4e919082feca5c0237750a7f6f2b3c20p22@EPB41L3
2.39e-66FFCP PHASE2:Hg19::chr8:81124000..81124005,-#_4e919082feca5c0237750a7f6f2b3c20p@chr8:81124000..81124005, -
2.39e-66FFCP PHASE2:Hg19::chr18:31950808..31950811,-#_4e919082feca5c0237750a7f6f2b3c20p@chr18:31950808..31950811, -
2.39e-66FFCP PHASE1:Hg19::chr19:54545810..54545821,-#_4e919082feca5c0237750a7f6f2b3c20p@chr19:54545810..54545821, -
4.66e-66FFCP PHASE2:Hg19::chr1:114654778..114654823,+#_9b2a371911e9cd3006b0c8033e3df2aap@chr1:114654778..114654823, +
4.66e-66FFCP PHASE1:Hg19::chr11:90393969..90393972,-#_9b2a371911e9cd3006b0c8033e3df2aap@chr11:90393969..90393972, -
4.66e-66FFCP PHASE1:Hg19::chr1:114654778..114654823,+#_9b2a371911e9cd3006b0c8033e3df2aap@chr1:114654778..114654823, +
4.66e-66FFCP PHASE2:Hg19::chr11:90393969..90393972,-#_9b2a371911e9cd3006b0c8033e3df2aap@chr11:90393969..90393972, -
1.46e-50FFCP PHASE2:Hg19::chr3:1113044..1113048,+#_a358276dcc6151fc722c0cef5f2f0a41p@chr3:1113044..1113048, +
1.46e-50FFCP PHASE1:Hg19::chrX:55684394..55684406,-#_a358276dcc6151fc722c0cef5f2f0a41p@chrX:55684394..55684406, -
1.46e-50FFCP PHASE2:Hg19::chrX:55684394..55684406,-#_a358276dcc6151fc722c0cef5f2f0a41p@chrX:55684394..55684406, -
1.46e-50FFCP PHASE1:Hg19::chr3:1113044..1113048,+#_a358276dcc6151fc722c0cef5f2f0a41p@chr3:1113044..1113048, +
2.42e-50FFCP PHASE1:Hg19::chr2:204266094..204266122,+#_d3ee5920f5b8b3ba934f19e39d332052p@chr2:204266094..204266122, +
2.42e-50FFCP PHASE1:Hg19::chr9:74838100..74838111,+#_d3ee5920f5b8b3ba934f19e39d332052p@chr9:74838100..74838111, +
2.42e-50FFCP PHASE2:Hg19::chr2:204266094..204266122,+#_d3ee5920f5b8b3ba934f19e39d332052p@chr2:204266094..204266122, +
2.42e-50FFCP PHASE2:Hg19::chr9:74838100..74838111,+#_d3ee5920f5b8b3ba934f19e39d332052p@chr9:74838100..74838111, +
3.99e-50FFCP PHASE1:Hg19::chr14:22659199..22659211,-#_a74b05d4e710f0b0be999605b82a0486p@chr14:22659199..22659211, -
3.99e-50FFCP PHASE1:Hg19::chr10:14431652..14431659,+#_a74b05d4e710f0b0be999605b82a0486p@chr10:14431652..14431659, +
3.99e-50FFCP PHASE2:Hg19::chr1:204159816..204159828,-#_a74b05d4e710f0b0be999605b82a0486p@chr1:204159816..204159828, -
3.99e-50FFCP PHASE2:Hg19::chr4:73248974..73249005,+#_a74b05d4e710f0b0be999605b82a0486p@chr4:73248974..73249005, +
3.99e-50FFCP PHASE1:Hg19::chr21:28899015..28899027,+#_a74b05d4e710f0b0be999605b82a0486p@chr21:28899015..28899027, +
3.99e-50FFCP PHASE1:Hg19::chr6:56765635..56765674,-#_a74b05d4e710f0b0be999605b82a0486p@chr6:56765635..56765674, -
3.99e-50FFCP PHASE2:Hg19::chr14:22659199..22659211,-#_a74b05d4e710f0b0be999605b82a0486p@chr14:22659199..22659211, -
3.99e-50FFCP PHASE2:Hg19::chr10:14431652..14431659,+#_a74b05d4e710f0b0be999605b82a0486p@chr10:14431652..14431659, +
3.99e-50FFCP PHASE2:Hg19::chr21:28899015..28899027,+#_a74b05d4e710f0b0be999605b82a0486p@chr21:28899015..28899027, +
3.99e-50FFCP PHASE1:Hg19::chr1:204159816..204159828,-#_a74b05d4e710f0b0be999605b82a0486p@chr1:204159816..204159828, -
3.99e-50FFCP PHASE1:Hg19::chr4:73248974..73249005,+#_a74b05d4e710f0b0be999605b82a0486p@chr4:73248974..73249005, +
3.99e-50FFCP PHASE2:Hg19::chr6:56765635..56765674,-#_a74b05d4e710f0b0be999605b82a0486p@chr6:56765635..56765674, -
6.58e-50FFCP PHASE2:Hg19::chr14:36642956..36642966,+#_21d719fe8de8c0a78c005e65db9affa9p@chr14:36642956..36642966, +
6.58e-50FFCP PHASE1:Hg19::chr14:36642956..36642966,+#_21d719fe8de8c0a78c005e65db9affa9p@chr14:36642956..36642966, +
6.62e-41FFCP PHASE2:Hg19::chr5:83381628..83381664,-#_9fe21c689ddb85df6492f943397009a9p@chr5:83381628..83381664, -
6.62e-41FFCP PHASE1:Hg19::chr20:9269067..9269070,+#_9fe21c689ddb85df6492f943397009a9p@chr20:9269067..9269070, +
6.62e-41FFCP PHASE1:Hg19::chrX:55684426..55684441,-#_9fe21c689ddb85df6492f943397009a9p@chrX:55684426..55684441, -
6.62e-41FFCP PHASE2:Hg19::chr20:9269067..9269070,+#_9fe21c689ddb85df6492f943397009a9p@chr20:9269067..9269070, +
6.62e-41FFCP PHASE2:Hg19::chrX:55684426..55684441,-#_9fe21c689ddb85df6492f943397009a9p@chrX:55684426..55684441, -
6.62e-41FFCP PHASE1:Hg19::chr5:83381628..83381664,-#_9fe21c689ddb85df6492f943397009a9p@chr5:83381628..83381664, -
9.91e-41FFCP PHASE2:Hg19::chr22:48134043..48134048,+#_fa9791c638076b59afbb4d3b2d6dd1c0p@chr22:48134043..48134048, +
9.91e-41FFCP PHASE1:Hg19::chr4:188508175..188508193,-#_fa9791c638076b59afbb4d3b2d6dd1c0p@chr4:188508175..188508193, -
9.91e-41FFCP PHASE2:Hg19::chr4:188508175..188508193,-#_fa9791c638076b59afbb4d3b2d6dd1c0p@chr4:188508175..188508193, -
9.91e-41FFCP PHASE1:Hg19::chr22:48134043..48134048,+#_fa9791c638076b59afbb4d3b2d6dd1c0p@chr22:48134043..48134048, +
2.21e-40FFCP PHASE1:Hg19::chr19:54545761..54545772,-#_9d2c89d0024430bc7f28702d73998db4p@chr19:54545761..54545772, -
2.21e-40FFCP PHASE1:Hg19::chr1:204159492..204159541,-#_9d2c89d0024430bc7f28702d73998db4p@chr1:204159492..204159541, -
2.21e-40FFCP PHASE2:Hg19::chr19:54545761..54545772,-#_9d2c89d0024430bc7f28702d73998db4p@chr19:54545761..54545772, -
2.21e-40FFCP PHASE2:Hg19::chr1:204159492..204159541,-#_9d2c89d0024430bc7f28702d73998db4p@chr1:204159492..204159541, -
3.3e-40FFCP PHASE2:Hg19::chr14:36990398..36990415,-#_3474bea06958f33a5492331ffcf829bap10@NKX2-1
3.3e-40FFCP PHASE2:Hg19::chr14:36643089..36643094,+#_3474bea06958f33a5492331ffcf829bap@chr14:36643089..36643094, +
3.3e-40FFCP PHASE1:Hg19::chr8:143317560..143317581,-#_3474bea06958f33a5492331ffcf829bap@chr8:143317560..143317581, -
3.3e-40FFCP PHASE1:Hg19::chr14:36990398..36990415,-#_3474bea06958f33a5492331ffcf829bap10@NKX2-1
3.3e-40FFCP PHASE1:Hg19::chr14:36643089..36643094,+#_3474bea06958f33a5492331ffcf829bap@chr14:36643089..36643094, +
3.3e-40FFCP PHASE2:Hg19::chr8:143317560..143317581,-#_3474bea06958f33a5492331ffcf829bap@chr8:143317560..143317581, -
1.84e-34FFCP PHASE1:Hg19::chr10:14431672..14431681,+#_95b05edf8c33c7d43616cae3ddb1e621p@chr10:14431672..14431681, +
1.84e-34FFCP PHASE1:Hg19::chr2:69180112..69180125,-#_95b05edf8c33c7d43616cae3ddb1e621p3@GKN2
1.84e-34FFCP PHASE2:Hg19::chr10:14431672..14431681,+#_95b05edf8c33c7d43616cae3ddb1e621p@chr10:14431672..14431681, +
1.84e-34FFCP PHASE2:Hg19::chr2:69180112..69180125,-#_95b05edf8c33c7d43616cae3ddb1e621p3@GKN2
2.58e-34FFCP PHASE1:Hg19::chr5:92498209..92498218,-#_5fa453ed34d73d60b3cf947258e7fd8ap@chr5:92498209..92498218, -
2.58e-34FFCP PHASE2:Hg19::chr5:92498209..92498218,-#_5fa453ed34d73d60b3cf947258e7fd8ap@chr5:92498209..92498218, -
3.61e-34FFCP PHASE1:Hg19::chr19:54545833..54545844,-#_c51eeb131e049d90a10691fa27de7db2p@chr19:54545833..54545844, -
3.61e-34FFCP PHASE2:Hg19::chr19:54545833..54545844,-#_c51eeb131e049d90a10691fa27de7db2p@chr19:54545833..54545844, -
5.05e-34FFCP PHASE2:Hg19::chr3:93707380..93707414,+#_4d165eae200ae0824f27af631f943c96p@chr3:93707380..93707414, +
5.05e-34FFCP PHASE1:Hg19::chr3:93707380..93707414,+#_4d165eae200ae0824f27af631f943c96p@chr3:93707380..93707414, +
7.06e-34FFCP PHASE2:Hg19::chr3:149079050..149079055,-#_7ebbebb0ab52bf4aa2d9e73707432befp@chr3:149079050..149079055, -
7.06e-34FFCP PHASE2:Hg19::chr14:36989407..36989410,-#_7ebbebb0ab52bf4aa2d9e73707432befp15@NKX2-1
7.06e-34FFCP PHASE1:Hg19::chr9:74810270..74810273,+#_7ebbebb0ab52bf4aa2d9e73707432befp@chr9:74810270..74810273, +
7.06e-34FFCP PHASE1:Hg19::chr14:36989407..36989410,-#_7ebbebb0ab52bf4aa2d9e73707432befp15@NKX2-1
7.06e-34FFCP PHASE1:Hg19::chr3:149079050..149079055,-#_7ebbebb0ab52bf4aa2d9e73707432befp@chr3:149079050..149079055, -
7.06e-34FFCP PHASE2:Hg19::chr9:74810270..74810273,+#_7ebbebb0ab52bf4aa2d9e73707432befp@chr9:74810270..74810273, +
7.48e-30FFCP PHASE2:Hg19::chr20:52789987..52790000,-#_2e8793023a9f6d32d1838e098f3634c4p4@CYP24A1
7.48e-30FFCP PHASE1:Hg19::chr20:22806463..22806487,+#_2e8793023a9f6d32d1838e098f3634c4p@chr20:22806463..22806487, +
7.48e-30FFCP PHASE1:Hg19::chr3:111633072..111633073,+#_2e8793023a9f6d32d1838e098f3634c4p@chr3:111633072..111633073, +
7.48e-30FFCP PHASE1:Hg19::chr2:69180083..69180096,-#_2e8793023a9f6d32d1838e098f3634c4p4@GKN2
7.48e-30FFCP PHASE2:Hg19::chr15:98646940..98646945,-#_2e8793023a9f6d32d1838e098f3634c4p1@ENST00000560195
7.48e-30FFCP PHASE2:Hg19::chr14:85880761..85880773,+#_2e8793023a9f6d32d1838e098f3634c4p@chr14:85880761..85880773, +
7.48e-30FFCP PHASE2:Hg19::chr20:22806463..22806487,+#_2e8793023a9f6d32d1838e098f3634c4p@chr20:22806463..22806487, +
7.48e-30FFCP PHASE1:Hg19::chr15:98646940..98646945,-#_2e8793023a9f6d32d1838e098f3634c4p1@ENST00000560195
7.48e-30FFCP PHASE2:Hg19::chr3:111633072..111633073,+#_2e8793023a9f6d32d1838e098f3634c4p@chr3:111633072..111633073, +
7.48e-30FFCP PHASE1:Hg19::chr20:52789987..52790000,-#_2e8793023a9f6d32d1838e098f3634c4p4@CYP24A1
7.48e-30FFCP PHASE2:Hg19::chr2:69180083..69180096,-#_2e8793023a9f6d32d1838e098f3634c4p4@GKN2
7.48e-30FFCP PHASE1:Hg19::chr14:85880761..85880773,+#_2e8793023a9f6d32d1838e098f3634c4p@chr14:85880761..85880773, +
9.99e-30FFCP PHASE2:Hg19::chrX:4463037..4463062,-#_aabad73e35d5a5b8b0fbefa503641d04p@chrX:4463037..4463062, -
9.99e-30FFCP PHASE2:Hg19::chr15:98546137..98546145,-#_aabad73e35d5a5b8b0fbefa503641d04p@chr15:98546137..98546145, -

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