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{{UBERON
{{UBERON
|id=UBERON:0004872
|alt_id=
|name=splanchnic layer of lateral plate mesoderm
|namespace=
|def="Layer of lateral plate mesoderm that forms the circulatory system and future gut wall - overlies endoderm[WP]." [Wikipedia:Lateral_plate_mesoderm#Division_into_layers]
|xref=AAO:0011102;;BILA:0000044;;XAO:0000276
|is_a=UBERON:0005423
|synonym="inner layer of lateral plate mesoderm" EXACT [];;"splanchnic mesoderm" RELATED [ISBN:9780878932504];;"visceral mesoderm" BROAD [BILA:0000044, http://www.drugs.com/dict/visceral-mesoderm.html, http://www.stedmans.com/]
|comment=todo - check BILA
|comment=todo - check BILA
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Layer of lateral plate mesoderm that forms the circulatory system and future gut wall - overlies endoderm[WP]." [Wikipedia:Lateral_plate_mesoderm#Division_into_layers]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004872
|is_a=UBERON:0005423
|is_obsolete=
|located_in=
|located_in=
|name=splanchnic layer of lateral plate mesoderm
|namespace=
|obo_creation_date=
|part_of=UBERON:0000922;;UBERON:0003081
|part_of=UBERON:0000922;;UBERON:0003081
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="inner layer of lateral plate mesoderm" EXACT [];;"splanchnic mesoderm" RELATED [ISBN:9780878932504];;"visceral mesoderm" BROAD [BILA:0000044, http://www.drugs.com/dict/visceral-mesoderm.html, http://www.stedmans.com/]
|union_of=
|xref=AAO:0011102;;BILA:0000044;;XAO:0000276
}}
}}

Revision as of 11:32, 12 September 2014

Name:splanchnic layer of lateral plate mesoderm
Definition:"Layer of lateral plate mesoderm that forms the circulatory system and future gut wall - overlies endoderm[WP]." [Wikipedia:Lateral_plate_mesoderm#Division_into_layers]
Xrefs:
links:

AAO:0011102
BILA:0000044

XAO:0000276
Synonyms: "inner layer of lateral plate mesoderm" EXACT []
"splanchnic mesoderm" RELATED [ISBN:9780878932504]
"visceral mesoderm" BROAD [BILA:0000044, http://www.drugs.com/dict/visceral-mesoderm.html, http://www.stedmans.com/]
Comments:todo - check BILA

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005423(developing anatomical structure)
part_of:UBERON:0000922(embryo),UBERON:0003081(lateral plate mesoderm)



Children

develops from:UBERON:0001040 (yolk sac),UBERON:0001981 (blood vessel),UBERON:0004340 (allantois),UBERON:0005891 (coelomic epithelium),UBERON:0006293 (spleen primordium),UBERON:0007005 (cardiac mesoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004872 (splanchnic layer of lateral plate mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.38e-91FFCP PHASE2:Hg19::chr8:55370720..55370733,+#_5140c8532f7003be7f1060e5144843cep2@SOX17
2.38e-91FFCP PHASE1:Hg19::chr8:55370720..55370733,+#_5140c8532f7003be7f1060e5144843cep2@SOX17
1.3e-70FFCP PHASE1:Hg19::chr12:96830430..96830450,+#_2cca5271f3db14b85cf7251983bfcdb6p@chr12:96830430..96830450, +
1.3e-70FFCP PHASE2:Hg19::chr12:96830430..96830450,+#_2cca5271f3db14b85cf7251983bfcdb6p@chr12:96830430..96830450, +
7.7e-69FFCP PHASE2:Hg19::chr4:70653649..70653665,-#_78fa3a2213289f78a7f5a58e5d9fcac5p4@SULT1B1
7.7e-69FFCP PHASE1:Hg19::chr4:70653649..70653665,-#_78fa3a2213289f78a7f5a58e5d9fcac5p4@SULT1B1
1.35e-66FFCP PHASE1:Hg19::chr3:30334038..30334060,+#_4406f286d5521195adf5a83a112e03f3p@chr3:30334038..30334060, +
1.35e-66FFCP PHASE2:Hg19::chr3:30334038..30334060,+#_4406f286d5521195adf5a83a112e03f3p@chr3:30334038..30334060, +
3.3e-66FFCP PHASE1:Hg19::chr4:70653673..70653688,-#_8e1743e9cd07fcfe84539d673c80a5afp3@SULT1B1
3.3e-66FFCP PHASE2:Hg19::chr4:70653673..70653688,-#_8e1743e9cd07fcfe84539d673c80a5afp3@SULT1B1
1.61e-64FFCP PHASE2:Hg19::chr7:22629318..22629324,+#_bd76005f14ac992f3cfdf35dc711b25ap1@ENST00000439823
1.61e-64FFCP PHASE1:Hg19::chr7:22629318..22629324,+#_bd76005f14ac992f3cfdf35dc711b25ap1@ENST00000439823
4.43e-59FFCP PHASE2:Hg19::chr11:128562673..128562716,-#_7d532eacb61c4abe67ea62e6bbc432cbp@chr11:128562673..128562716, -
4.43e-59FFCP PHASE1:Hg19::chr11:128562673..128562716,-#_7d532eacb61c4abe67ea62e6bbc432cbp@chr11:128562673..128562716, -
7.02e-57FFCP PHASE2:Hg19::chr22:21138343..21138378,+#_717774197e51889dc3ae959a42d4ad72p@chr22:21138343..21138378, +
7.02e-57FFCP PHASE1:Hg19::chr22:21138343..21138378,+#_717774197e51889dc3ae959a42d4ad72p@chr22:21138343..21138378, +
1.91e-56FFCP PHASE2:Hg19::chr1:21606171..21606188,-#_da019028347854013f332253021cde08p10@ECE1
1.91e-56FFCP PHASE1:Hg19::chr1:21606171..21606188,-#_da019028347854013f332253021cde08p10@ECE1
1.04e-54FFCP PHASE1:Hg19::chr4:145567374..145567390,+#_cbf7c85ca4ff5c95a30d0de85cf0be39p6@HHIP
1.04e-54FFCP PHASE2:Hg19::chr4:145567374..145567390,+#_cbf7c85ca4ff5c95a30d0de85cf0be39p6@HHIP
2.07e-54FFCP PHASE1:Hg19::chr11:102668200..102668228,-#_88deb30491bd03f5ea49a84e9dceba84p4@MMP1
2.07e-54FFCP PHASE2:Hg19::chr11:102668200..102668228,-#_88deb30491bd03f5ea49a84e9dceba84p4@MMP1
2.72e-54FFCP PHASE2:Hg19::chr14:63671393..63671437,+#_9b965de18e4f39c2fcce01391a4066d4p2@RHOJ
2.72e-54FFCP PHASE1:Hg19::chr14:63671393..63671437,+#_9b965de18e4f39c2fcce01391a4066d4p2@RHOJ
6.61e-53FFCP PHASE1:Hg19::chr11:102667477..102667490,-#_84cc1226486a2f871ca4acc20b791390p@chr11:102667477..102667490, -
6.61e-53FFCP PHASE2:Hg19::chr11:102667477..102667490,-#_84cc1226486a2f871ca4acc20b791390p@chr11:102667477..102667490, -
1.26e-52FFCP PHASE2:Hg19::chr8:55370487..55370503,+#_7348b160dff661b922baeeb305262155p1@SOX17
1.26e-52FFCP PHASE1:Hg19::chr8:55370487..55370503,+#_7348b160dff661b922baeeb305262155p1@SOX17
1.29e-52FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_2656d2b4385e3fbffa169c0e99169657p@chr4:7846444..7846449, -
1.29e-52FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_2656d2b4385e3fbffa169c0e99169657p@chr4:7846444..7846449, -
1.8e-52FFCP PHASE2:Hg19::chr4:145567563..145567572,+#_3c2b93ba6e09b31bc4addd21db672b3dp8@HHIP
1.8e-52FFCP PHASE1:Hg19::chr4:145567563..145567572,+#_3c2b93ba6e09b31bc4addd21db672b3dp8@HHIP
2.12e-52FFCP PHASE1:Hg19::chr10:4823096..4823144,-#_83bca3b93a0474fa39f7d2f10e296d24p@chr10:4823096..4823144, -
2.12e-52FFCP PHASE2:Hg19::chr10:4823096..4823144,-#_83bca3b93a0474fa39f7d2f10e296d24p@chr10:4823096..4823144, -
2.73e-52FFCP PHASE1:Hg19::chr4:145566841..145566862,+#_3d9d9de7c6dc7a1cbee9762567a44c5ep10@HHIP
2.73e-52FFCP PHASE2:Hg19::chr4:145566841..145566862,+#_3d9d9de7c6dc7a1cbee9762567a44c5ep10@HHIP
2.12e-51FFCP PHASE2:Hg19::chr1:79472458..79472472,-#_eda09eecdb90c75a71b6243ed664f012p3@ELTD1
2.12e-51FFCP PHASE1:Hg19::chr1:79472458..79472472,-#_eda09eecdb90c75a71b6243ed664f012p3@ELTD1
2.44e-51FFCP PHASE1:Hg19::chr6:153019023..153019043,+#_b82a76e950bf7db5128cda92eeea6284p2@MYCT1
2.44e-51FFCP PHASE2:Hg19::chr6:153019023..153019043,+#_b82a76e950bf7db5128cda92eeea6284p2@MYCT1
5.39e-50FFCP PHASE1:Hg19::chr2:109271481..109271493,+#_07495567484dd74dc2f47307799cc1aap6@LIMS1
5.39e-50FFCP PHASE2:Hg19::chr2:109271481..109271493,+#_07495567484dd74dc2f47307799cc1aap6@LIMS1
8.34e-50FFCP PHASE2:Hg19::chr4:145567426..145567455,+#_bff9a5a0305d3c57a956c7fc3404c2ddp5@HHIP
8.34e-50FFCP PHASE1:Hg19::chr4:145567426..145567455,+#_bff9a5a0305d3c57a956c7fc3404c2ddp5@HHIP
4.34e-49FFCP PHASE2:Hg19::chr11:102668016..102668028,-#_7a5cd38f245fea279892ede4ed574da1p5@MMP1
4.34e-49FFCP PHASE1:Hg19::chr11:102668016..102668028,-#_7a5cd38f245fea279892ede4ed574da1p5@MMP1
6.85e-49FFCP PHASE1:Hg19::chr3:149258838..149258848,-#_caa939f413c663a497103eec2f98655dp24@WWTR1
6.85e-49FFCP PHASE2:Hg19::chr3:149258838..149258848,-#_caa939f413c663a497103eec2f98655dp24@WWTR1
9.72e-49FFCP PHASE2:Hg19::chr1:21606132..21606156,-#_3e5a61e548fea1eec62a33ee2662f33dp9@ECE1
9.72e-49FFCP PHASE1:Hg19::chr1:21606132..21606156,-#_3e5a61e548fea1eec62a33ee2662f33dp9@ECE1
3.07e-48FFCP PHASE1:Hg19::chr4:145567391..145567425,+#_12952ab4dd0d3ba40d5d83508d8d04a3p4@HHIP
3.07e-48FFCP PHASE2:Hg19::chr4:145567391..145567425,+#_12952ab4dd0d3ba40d5d83508d8d04a3p4@HHIP
5.7e-48FFCP PHASE1:Hg19::chr5:54281535..54281547,-#_a6b2f146035c60d8c7bd27ce5154bc2ep2@ESM1
5.7e-48FFCP PHASE2:Hg19::chr5:54281535..54281547,-#_a6b2f146035c60d8c7bd27ce5154bc2ep2@ESM1
1.35e-47FFCP PHASE1:Hg19::chr11:102668178..102668206,+#_1c8f8118170b970af6bccec9ad5faabdp@chr11:102668178..102668206, +
1.35e-47FFCP PHASE2:Hg19::chr11:102668178..102668206,+#_1c8f8118170b970af6bccec9ad5faabdp@chr11:102668178..102668206, +
1.62e-47FFCP PHASE2:Hg19::chr11:102662162..102662217,-#_8eb9e52951c64876d4a82956bf934dbcp@chr11:102662162..102662217, -
1.62e-47FFCP PHASE1:Hg19::chr11:102662162..102662217,-#_8eb9e52951c64876d4a82956bf934dbcp@chr11:102662162..102662217, -
2.53e-47FFCP PHASE2:Hg19::chr22:50553000..50553012,+#_14a53f0e55d54c805390f165afc8af7ep2@MOV10L1
2.53e-47FFCP PHASE1:Hg19::chr22:50553000..50553012,+#_14a53f0e55d54c805390f165afc8af7ep2@MOV10L1
3.06e-47FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_53965fa67a454560822a0b880438182fp@chr11:102661517..102661541, -
3.06e-47FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_53965fa67a454560822a0b880438182fp@chr11:102661517..102661541, -
7.02e-47FFCP PHASE2:Hg19::chr1:186946626..186946652,+#_8d8205ce4b26099996c16a103342ea8bp@chr1:186946626..186946652, +
7.02e-47FFCP PHASE1:Hg19::chr1:186946626..186946652,+#_8d8205ce4b26099996c16a103342ea8bp@chr1:186946626..186946652, +
9.67e-47FFCP PHASE2:Hg19::chr9:27109392..27109435,+#_3f286b25d47f25a7494b035b6835c4a1p1@TEK
9.67e-47FFCP PHASE1:Hg19::chr9:27109392..27109435,+#_3f286b25d47f25a7494b035b6835c4a1p1@TEK
1.31e-46FFCP PHASE1:Hg19::chr5:141060389..141060439,-#_3d97fb2f5dec448200962b84247dba6dp3@ARAP3
1.31e-46FFCP PHASE2:Hg19::chr5:141060389..141060439,-#_3d97fb2f5dec448200962b84247dba6dp3@ARAP3
2.48e-46FFCP PHASE2:Mm9::chr19:36187511..36187515,-#_17d81d5fe393e5554037c8e525917932p@chr19:36187511..36187515, -
2.48e-46FFCP PHASE1:Mm9::chr19:36187511..36187515,-#_17d81d5fe393e5554037c8e525917932p@chr19:36187511..36187515, -
3.1e-46FFCP PHASE1:Hg19::chr22:21138313..21138336,+#_5507afb86c0202107f7bbc7028619cb4p@chr22:21138313..21138336, +
3.1e-46FFCP PHASE2:Hg19::chr22:21138313..21138336,+#_5507afb86c0202107f7bbc7028619cb4p@chr22:21138313..21138336, +
1.43e-45FFCP PHASE1:Hg19::chr1:79472477..79472510,-#_43d88c1c8acadbb63c236ec4948d0575p2@ELTD1
1.43e-45FFCP PHASE2:Hg19::chr1:79472477..79472510,-#_43d88c1c8acadbb63c236ec4948d0575p2@ELTD1
2.23e-45FFCP PHASE2:Hg19::chr11:86649508..86649546,-#_0de06e67404131a90482e511f3e9658fp@chr11:86649508..86649546, -
2.23e-45FFCP PHASE1:Hg19::chr11:86649508..86649546,-#_0de06e67404131a90482e511f3e9658fp@chr11:86649508..86649546, -
2.6e-45FFCP PHASE1:Hg19::chr6:153019069..153019091,+#_869923e2151b779887bd808339d818f0p1@MYCT1
2.6e-45FFCP PHASE2:Hg19::chr6:153019069..153019091,+#_869923e2151b779887bd808339d818f0p1@MYCT1
8.03e-45FFCP PHASE1:Hg19::chr4:145567356..145567368,+#_9a8463d766752c2cab60a0d82cd3a0b8p7@HHIP
8.03e-45FFCP PHASE2:Hg19::chr4:145567356..145567368,+#_9a8463d766752c2cab60a0d82cd3a0b8p7@HHIP
9.8e-45FFCP PHASE2:Hg19::chr1:21606082..21606114,-#_11e549f5bb4a91920a990ca4dccbcb9dp7@ECE1
9.8e-45FFCP PHASE1:Hg19::chr1:21606082..21606114,-#_11e549f5bb4a91920a990ca4dccbcb9dp7@ECE1
1.88e-44FFCP PHASE2:Hg19::chr17:25887330..25887369,+#_3c664e188caecf9ad0c60c0a380fd507p2@KSR1
1.88e-44FFCP PHASE1:Hg19::chr17:25887330..25887369,+#_3c664e188caecf9ad0c60c0a380fd507p2@KSR1
2.54e-44FFCP PHASE1:Hg19::chr11:102668074..102668126,-#_c90bc39f4ab474968193400cd563208ep3@MMP1
2.54e-44FFCP PHASE2:Hg19::chr11:102668074..102668126,-#_c90bc39f4ab474968193400cd563208ep3@MMP1
7.76e-44FFCP PHASE2:Hg19::chr10:13934004..13934022,-#_c618c07f684ad0179ae130d2fe0d7f8cp@chr10:13934004..13934022, -
7.76e-44FFCP PHASE1:Hg19::chr10:13934004..13934022,-#_c618c07f684ad0179ae130d2fe0d7f8cp@chr10:13934004..13934022, -
9.18e-44FFCP PHASE1:Mm9::chr4:147375434..147375447,+#_d1b0d5a1b21b1b08542e2fb9e0df2467p@chr4:147375434..147375447, +
9.18e-44FFCP PHASE2:Mm9::chr9:24549775..24549776,-#_d1b0d5a1b21b1b08542e2fb9e0df2467p@chr9:24549775..24549776, -
9.18e-44FFCP PHASE2:Mm9::chr4:151692832..151692868,+#_d1b0d5a1b21b1b08542e2fb9e0df2467p@chr4:151692832..151692868, +
9.18e-44FFCP PHASE1:Mm9::chr1:137747392..137747402,-#_d1b0d5a1b21b1b08542e2fb9e0df2467p@chr1:137747392..137747402, -
9.18e-44FFCP PHASE2:Mm9::chr1:137747392..137747402,-#_d1b0d5a1b21b1b08542e2fb9e0df2467p@chr1:137747392..137747402, -
9.18e-44FFCP PHASE1:Mm9::chr4:151692832..151692868,+#_d1b0d5a1b21b1b08542e2fb9e0df2467p@chr4:151692832..151692868, +
9.18e-44FFCP PHASE1:Mm9::chr8:87888940..87888961,-#_d1b0d5a1b21b1b08542e2fb9e0df2467p@chr8:87888940..87888961, -
9.18e-44FFCP PHASE2:Mm9::chr8:87888940..87888961,-#_d1b0d5a1b21b1b08542e2fb9e0df2467p@chr8:87888940..87888961, -
9.18e-44FFCP PHASE1:Mm9::chr9:24549775..24549776,-#_d1b0d5a1b21b1b08542e2fb9e0df2467p@chr9:24549775..24549776, -
9.18e-44FFCP PHASE2:Mm9::chr4:147375434..147375447,+#_d1b0d5a1b21b1b08542e2fb9e0df2467p@chr4:147375434..147375447, +
1.23e-43FFCP PHASE1:Hg19::chr16:86964992..86965035,-#_1eb1487a92c521128c488ef0d820ab84p@chr16:86964992..86965035, -
1.23e-43FFCP PHASE2:Hg19::chr16:86964992..86965035,-#_1eb1487a92c521128c488ef0d820ab84p@chr16:86964992..86965035, -

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