Personal tools

UBERON:0007499: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0007499
|alt_id=
|name=epithelial sac
|namespace=
|def="An epithelial tube that is open at one end only." [AEO:JB, UBERONREF:0000001]
|xref=AEO:0000115;;EHDAA2:0003115
|is_a=UBERON:0003914;;UBERON:0009856
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An epithelial tube that is open at one end only." [AEO:JB, UBERONREF:0000001]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0007499
|is_a=UBERON:0003914 ;;UBERON:0009856
|is_obsolete=
|located_in=
|located_in=
|name=epithelial sac
|namespace=
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=AEO:0000115;;EHDAA2:0003115
}}
}}

Revision as of 11:43, 12 September 2014

Name:epithelial sac
Definition:"An epithelial tube that is open at one end only." [AEO:JB, UBERONREF:0000001]
Xrefs:
links:

AEO:0000115

EHDAA2:0003115

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003914(epithelial tube),UBERON:0009856(sac)



Children

is a:UBERON:0000084 (ureteric bud),UBERON:0002169 (alveolar sac),UBERON:0003922 (pancreatic epithelial bud),UBERON:0005356 (Rathke's pouch),UBERON:0008835 (hepatic diverticulum)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007499 (epithelial sac), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.22e-72FFCP PHASE2:Mm9::chr5:90897694..90897705,+#_36fb81bf22e520571b8465f8c2d74707p@chr5:90897694..90897705, +
1.22e-72FFCP PHASE1:Mm9::chr5:90897694..90897705,+#_36fb81bf22e520571b8465f8c2d74707p@chr5:90897694..90897705, +
2.2e-72FFCP PHASE1:Mm9::chr19:25169885..25169900,+#_3fa0318c5742bb4b2537c132ffbb5746p@chr19:25169885..25169900, +
2.2e-72FFCP PHASE2:Mm9::chr19:25169885..25169900,+#_3fa0318c5742bb4b2537c132ffbb5746p@chr19:25169885..25169900, +
5.51e-71FFCP PHASE1:Mm9::chr7:121912281..121912295,+#_f552c05151d392b2136ed05ff1744b41p6@Insc
5.51e-71FFCP PHASE2:Mm9::chr7:121912281..121912295,+#_f552c05151d392b2136ed05ff1744b41p6@Insc
1.7e-70FFCP PHASE2:Mm9::chr8:131012371..131012382,-#_ab769a815a9291f635d871a7537d4458p2@uc009nzu.1
1.7e-70FFCP PHASE1:Mm9::chr8:131012371..131012382,-#_ab769a815a9291f635d871a7537d4458p2@uc009nzu.1
1.28e-68FFCP PHASE2:Mm9::chr13:94407586..94407604,-#_9365706cc5304643e8e1cc5a894a1492p5@Bhmt
1.28e-68FFCP PHASE1:Mm9::chr13:94407586..94407604,-#_9365706cc5304643e8e1cc5a894a1492p5@Bhmt
2.72e-68FFCP PHASE2:Mm9::chr1:162917234..162917248,+#_56cc547046251e7d6cf6476331f154d6p@chr1:162917234..162917248, +
2.72e-68FFCP PHASE1:Mm9::chr1:162917234..162917248,+#_56cc547046251e7d6cf6476331f154d6p@chr1:162917234..162917248, +
3.5e-68FFCP PHASE2:Mm9::chr9:110892216..110892232,-#_c367deb19a8e8f6af97b0b13a5b52d84p1@Rtp3
3.5e-68FFCP PHASE1:Mm9::chr9:110892216..110892232,-#_c367deb19a8e8f6af97b0b13a5b52d84p1@Rtp3
2.47e-67FFCP PHASE2:Mm9::chr7:112744083..112744109,-#_9291461b2769b3882653cf4e03f2fe6cp@chr7:112744083..112744109, -
2.47e-67FFCP PHASE1:Mm9::chr9:110892239..110892252,-#_9291461b2769b3882653cf4e03f2fe6cp2@Rtp3
2.47e-67FFCP PHASE1:Mm9::chr7:112744083..112744109,-#_9291461b2769b3882653cf4e03f2fe6cp@chr7:112744083..112744109, -
2.47e-67FFCP PHASE2:Mm9::chr9:110892239..110892252,-#_9291461b2769b3882653cf4e03f2fe6cp2@Rtp3
6.55e-67FFCP PHASE2:Mm9::chr13:23928766..23928779,+#_9eefcda94e80c214a9d3919810523e7ap@chr13:23928766..23928779, +
6.55e-67FFCP PHASE1:Mm9::chr13:23928766..23928779,+#_9eefcda94e80c214a9d3919810523e7ap@chr13:23928766..23928779, +
7.85e-67FFCP PHASE1:Mm9::chr7:28237436..28237488,+#_41b292bcde3e973e17901d86d4a7d156p3@Blvrb
7.85e-67FFCP PHASE2:Mm9::chr7:28237436..28237488,+#_41b292bcde3e973e17901d86d4a7d156p3@Blvrb
1.58e-66FFCP PHASE1:Mm9::chr2:10041210..10041222,-#_91b10e51bc1cec64dcf48673575457d9p@chr2:10041210..10041222, -
1.58e-66FFCP PHASE1:Mm9::chr6:128436166..128436185,-#_91b10e51bc1cec64dcf48673575457d9p@chr6:128436166..128436185, -
1.58e-66FFCP PHASE2:Mm9::chr16:22898981..22898988,-#_91b10e51bc1cec64dcf48673575457d9p@chr16:22898981..22898988, -
1.58e-66FFCP PHASE2:Mm9::chr6:128436166..128436185,-#_91b10e51bc1cec64dcf48673575457d9p@chr6:128436166..128436185, -
1.58e-66FFCP PHASE2:Mm9::chr16:22894900..22894910,+#_91b10e51bc1cec64dcf48673575457d9p@chr16:22894900..22894910, +
1.58e-66FFCP PHASE1:Mm9::chr16:22898981..22898988,-#_91b10e51bc1cec64dcf48673575457d9p@chr16:22898981..22898988, -
1.58e-66FFCP PHASE1:Mm9::chr16:22894900..22894910,+#_91b10e51bc1cec64dcf48673575457d9p@chr16:22894900..22894910, +
1.58e-66FFCP PHASE2:Mm9::chr12:105004018..105004046,-#_91b10e51bc1cec64dcf48673575457d9p@chr12:105004018..105004046, -
1.58e-66FFCP PHASE2:Mm9::chr2:10041210..10041222,-#_91b10e51bc1cec64dcf48673575457d9p@chr2:10041210..10041222, -
1.58e-66FFCP PHASE1:Mm9::chr12:105004018..105004046,-#_91b10e51bc1cec64dcf48673575457d9p@chr12:105004018..105004046, -
1.17e-64FFCP PHASE1:Mm9::chr1:173155793..173155841,+#_9489bca7ebc52943b3bab04321655016p@chr1:173155793..173155841, +
1.17e-64FFCP PHASE2:Mm9::chr1:173155793..173155841,+#_9489bca7ebc52943b3bab04321655016p@chr1:173155793..173155841, +
1.34e-64FFCP PHASE1:Mm9::chr17:12588483..12588503,+#_041e21109fcb39a9c0cb1a45eb136e02p@chr17:12588483..12588503, +
1.34e-64FFCP PHASE2:Mm9::chr17:12588483..12588503,+#_041e21109fcb39a9c0cb1a45eb136e02p@chr17:12588483..12588503, +
1.38e-64FFCP PHASE1:Mm9::chr17:12584645..12584657,+#_72c4e9b5297cc1fda64c8c5e95b086bfp@chr17:12584645..12584657, +
1.38e-64FFCP PHASE2:Mm9::chr17:12584645..12584657,+#_72c4e9b5297cc1fda64c8c5e95b086bfp@chr17:12584645..12584657, +
1.62e-64FFCP PHASE2:Mm9::chr1:166179426..166179437,+#_a265546da0526981f62be6ef7476a414p@chr1:166179426..166179437, +
1.62e-64FFCP PHASE1:Mm9::chr1:166179426..166179437,+#_a265546da0526981f62be6ef7476a414p@chr1:166179426..166179437, +
1.68e-64FFCP PHASE2:Mm9::chr8:34917332..34917357,-#_0bd43018cc4fdb831e6be4709b2e0dd4p@chr8:34917332..34917357, -
1.68e-64FFCP PHASE1:Mm9::chr8:34917332..34917357,-#_0bd43018cc4fdb831e6be4709b2e0dd4p@chr8:34917332..34917357, -
4.38e-64FFCP PHASE2:Mm9::chr19:38191263..38191291,-#_bb7ec08edd869cdb97e997025bd2b8f1p@chr19:38191263..38191291, -
4.38e-64FFCP PHASE1:Mm9::chr19:38191263..38191291,-#_bb7ec08edd869cdb97e997025bd2b8f1p@chr19:38191263..38191291, -
9.3e-64FFCP PHASE2:Mm9::chr7:121912266..121912277,+#_e8ebfb270d1fb517a66e1fff43184e4cp8@Insc
9.3e-64FFCP PHASE1:Mm9::chr7:121912266..121912277,+#_e8ebfb270d1fb517a66e1fff43184e4cp8@Insc
1.1e-63FFCP PHASE1:Mm9::chr5:90893974..90893978,+#_05a0919efcc91e0729cfe90183962246p@chr5:90893974..90893978, +
1.1e-63FFCP PHASE2:Mm9::chr5:90893974..90893978,+#_05a0919efcc91e0729cfe90183962246p@chr5:90893974..90893978, +
1.7e-63FFCP PHASE2:Mm9::chr8:131012475..131012492,-#_b460a5d83dde1132a628b30268aed927p1@uc009nzu.1
1.7e-63FFCP PHASE1:Mm9::chr8:131012475..131012492,-#_b460a5d83dde1132a628b30268aed927p1@uc009nzu.1
1.85e-63FFCP PHASE1:Mm9::chr8:46380208..46380217,-#_bc9b7bf0238bdae03706aa48cf3dc533p3@Klkb1
1.85e-63FFCP PHASE2:Mm9::chr8:46380208..46380217,-#_bc9b7bf0238bdae03706aa48cf3dc533p3@Klkb1
2.02e-63FFCP PHASE2:Mm9::chr3:57191661..57191672,-#_1f84196d7142ae5531e6f1ee53709160p@chr3:57191661..57191672, -
2.02e-63FFCP PHASE1:Mm9::chr3:57191661..57191672,-#_1f84196d7142ae5531e6f1ee53709160p@chr3:57191661..57191672, -
2.18e-63FFCP PHASE1:Mm9::chr17:12583153..12583171,+#_a34dcc7940ec4d643b98cef03019cf86p@chr17:12583153..12583171, +
2.18e-63FFCP PHASE2:Mm9::chr17:12583153..12583171,+#_a34dcc7940ec4d643b98cef03019cf86p@chr17:12583153..12583171, +
2.2e-63FFCP PHASE2:Mm9::chr3:82814412..82814431,+#_09f8fe92f6651f161e3001531a5b4f18p@chr3:82814412..82814431, +
2.2e-63FFCP PHASE1:Mm9::chr3:82814412..82814431,+#_09f8fe92f6651f161e3001531a5b4f18p@chr3:82814412..82814431, +
3.67e-63FFCP PHASE2:Mm9::chr5:93000570..93000589,+#_1457e8eb1cf9981b4b7c6bd832a14d36p3@Fam47e
3.67e-63FFCP PHASE1:Mm9::chr5:93000570..93000589,+#_1457e8eb1cf9981b4b7c6bd832a14d36p3@Fam47e
5.17e-63FFCP PHASE1:Mm9::chr16:22895330..22895339,-#_c78233a1525d710a95b12c95123988ffp@chr16:22895330..22895339, -
5.17e-63FFCP PHASE1:Mm9::chr15:77605636..77605639,+#_c78233a1525d710a95b12c95123988ffp@chr15:77605636..77605639, +
5.17e-63FFCP PHASE1:Mm9::chr16:23449901..23449906,-#_c78233a1525d710a95b12c95123988ffp@chr16:23449901..23449906, -
5.17e-63FFCP PHASE1:Mm9::chr3:82835513..82835525,+#_c78233a1525d710a95b12c95123988ffp@chr3:82835513..82835525, +
5.17e-63FFCP PHASE2:Mm9::chr15:77605636..77605639,+#_c78233a1525d710a95b12c95123988ffp@chr15:77605636..77605639, +
5.17e-63FFCP PHASE2:Mm9::chr3:82835513..82835525,+#_c78233a1525d710a95b12c95123988ffp@chr3:82835513..82835525, +
5.17e-63FFCP PHASE1:Mm9::chr8:92849825..92849837,-#_c78233a1525d710a95b12c95123988ffp@chr8:92849825..92849837, -
5.17e-63FFCP PHASE2:Mm9::chr16:23449901..23449906,-#_c78233a1525d710a95b12c95123988ffp@chr16:23449901..23449906, -
5.17e-63FFCP PHASE2:Mm9::chr16:22895330..22895339,-#_c78233a1525d710a95b12c95123988ffp@chr16:22895330..22895339, -
5.17e-63FFCP PHASE2:Mm9::chr8:92849825..92849837,-#_c78233a1525d710a95b12c95123988ffp@chr8:92849825..92849837, -
5.82e-63FFCP PHASE2:Hg19::chr12:100867777..100867788,+#_c8d4ca78d3cadb48466ba9d97cc1b1bbp5@NR1H4
5.82e-63FFCP PHASE1:Hg19::chr12:100867777..100867788,+#_c8d4ca78d3cadb48466ba9d97cc1b1bbp5@NR1H4
6.19e-63FFCP PHASE2:Mm9::chr16:22896674..22896687,-#_96e6a11b1979c6286da0b97f61df4125p@chr16:22896674..22896687, -
6.19e-63FFCP PHASE1:Mm9::chr16:22896674..22896687,-#_96e6a11b1979c6286da0b97f61df4125p@chr16:22896674..22896687, -
6.77e-63FFCP PHASE1:Mm9::chr17:12577256..12577270,+#_1d07cbc6c1ffd31dfef56ecd1d8b80a4p@chr17:12577256..12577270, +
6.77e-63FFCP PHASE2:Mm9::chr17:12577256..12577270,+#_1d07cbc6c1ffd31dfef56ecd1d8b80a4p@chr17:12577256..12577270, +
6.95e-63FFCP PHASE1:Mm9::chr17:32822530..32822541,+#_bcf655562c9e4b51a8d6f7466f75ba13p2@Cyp4f15
6.95e-63FFCP PHASE2:Mm9::chr17:32822530..32822541,+#_bcf655562c9e4b51a8d6f7466f75ba13p2@Cyp4f15
7.62e-63FFCP PHASE1:Hg19::chr2:21233797..21233804,-#_9ce3ac73c6bb056bb886f203d0be6010p58@APOB
7.62e-63FFCP PHASE2:Hg19::chr2:21233797..21233804,-#_9ce3ac73c6bb056bb886f203d0be6010p58@APOB
7.62e-63FFCP PHASE2:Hg19::chr8:144417558..144417572,-#_9ce3ac73c6bb056bb886f203d0be6010p7@TOP1MT
7.62e-63FFCP PHASE1:Hg19::chr8:144417558..144417572,-#_9ce3ac73c6bb056bb886f203d0be6010p7@TOP1MT
9.86e-63FFCP PHASE2:Mm9::chr11:60622345..60622377,-#_e62042b4e0c6679dbb8f4bbfa4a239c4p@chr11:60622345..60622377, -
9.86e-63FFCP PHASE1:Mm9::chr11:60622345..60622377,-#_e62042b4e0c6679dbb8f4bbfa4a239c4p@chr11:60622345..60622377, -
1.39e-62FFCP PHASE1:Mm9::chr6:128438012..128438027,-#_557dd64fcfc70530fa1d331eb0f83fbep@chr6:128438012..128438027, -
1.39e-62FFCP PHASE2:Mm9::chr16:22895286..22895297,-#_557dd64fcfc70530fa1d331eb0f83fbep@chr16:22895286..22895297, -
1.39e-62FFCP PHASE2:Mm9::chr3:82847318..82847329,-#_557dd64fcfc70530fa1d331eb0f83fbep@chr3:82847318..82847329, -
1.39e-62FFCP PHASE1:Mm9::chr11:46512551..46512577,-#_557dd64fcfc70530fa1d331eb0f83fbep5@Timd2
1.39e-62FFCP PHASE1:Mm9::chr6:11948347..11948351,-#_557dd64fcfc70530fa1d331eb0f83fbep@chr6:11948347..11948351, -
1.39e-62FFCP PHASE2:Mm9::chr6:128436196..128436215,-#_557dd64fcfc70530fa1d331eb0f83fbep@chr6:128436196..128436215, -
1.39e-62FFCP PHASE2:Mm9::chr12:105003025..105003036,-#_557dd64fcfc70530fa1d331eb0f83fbep@chr12:105003025..105003036, -
1.39e-62FFCP PHASE2:Mm9::chr12:105066241..105066272,-#_557dd64fcfc70530fa1d331eb0f83fbep1@Serpina1b
1.39e-62FFCP PHASE2:Mm9::chr16:22899236..22899246,+#_557dd64fcfc70530fa1d331eb0f83fbep@chr16:22899236..22899246, +
1.39e-62FFCP PHASE1:Mm9::chr3:82847318..82847329,-#_557dd64fcfc70530fa1d331eb0f83fbep@chr3:82847318..82847329, -
1.39e-62FFCP PHASE1:Mm9::chr12:105066241..105066272,-#_557dd64fcfc70530fa1d331eb0f83fbep1@Serpina1b
1.39e-62FFCP PHASE1:Mm9::chr16:22899236..22899246,+#_557dd64fcfc70530fa1d331eb0f83fbep@chr16:22899236..22899246, +
1.39e-62FFCP PHASE2:Mm9::chr16:22899322..22899331,+#_557dd64fcfc70530fa1d331eb0f83fbep@chr16:22899322..22899331, +
1.39e-62FFCP PHASE1:Mm9::chr6:128436196..128436215,-#_557dd64fcfc70530fa1d331eb0f83fbep@chr6:128436196..128436215, -
1.39e-62FFCP PHASE2:Mm9::chr12:105002005..105002050,-#_557dd64fcfc70530fa1d331eb0f83fbep@chr12:105002005..105002050, -
1.39e-62FFCP PHASE1:Mm9::chr16:22895286..22895297,-#_557dd64fcfc70530fa1d331eb0f83fbep@chr16:22895286..22895297, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0007499&oldid=3274581"