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{{UBERON
{{UBERON
|id=UBERON:0007684
|alt_id=
|name=uriniferous tubule
|namespace=
|def="functional unit of the kidney that forms urine, consisting of two parts, the nephron and the collecting tubule." [ISBN10:0073040584]
|xref=FMA:17691
|is_a=UBERON:0003914;;UBERON:0004819;;UBERON:0006555
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="functional unit of the kidney that forms urine, consisting of two parts, the nephron and the collecting tubule." [ISBN10:0073040584]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0007684
|is_a=UBERON:0003914 ;;UBERON:0004819 ;;UBERON:0006555
|is_obsolete=
|located_in=
|located_in=
|name=uriniferous tubule
|namespace=
|obo_creation_date=
|part_of=UBERON:0002113
|part_of=UBERON:0002113
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FMA:17691
}}
}}

Revision as of 11:44, 12 September 2014

Name:uriniferous tubule
Definition:"functional unit of the kidney that forms urine, consisting of two parts, the nephron and the collecting tubule." [ISBN10:0073040584]
Xrefs:
links:
FMA:17691

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003914(epithelial tube),UBERON:0004819(kidney epithelium),UBERON:0006555(excretory tube)
part_of:UBERON:0002113(kidney)



Children

part of:UBERON:0001229 (renal corpuscle),UBERON:0001285 (nephron)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007684 (uriniferous tubule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.05e-87FFCP PHASE1:Hg19::chr2:693380..693398,+#_f96677576a4de2e83aff2134b7333368p@chr2:693380..693398, +
1.05e-87FFCP PHASE2:Hg19::chr2:693380..693398,+#_f96677576a4de2e83aff2134b7333368p@chr2:693380..693398, +
1.72e-83FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_4ba1d3751586316142bcf81658db5340p4@MEGF11
1.72e-83FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_4ba1d3751586316142bcf81658db5340p4@MEGF11
2.2e-74FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_9733f522858eb8c6bda9284f248a13cbp7@HOXA10
2.2e-74FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_9733f522858eb8c6bda9284f248a13cbp7@HOXA10
7.63e-66FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_f6639e196c49be39dc0e262306507c7fp@chr1:1100457..1100470, +
7.63e-66FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_f6639e196c49be39dc0e262306507c7fp@chr1:1100457..1100470, +
6.44e-62FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_d8eeca4ce84a42fea5d3935bac6c88bep4@PAX2
6.44e-62FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_d8eeca4ce84a42fea5d3935bac6c88bep4@PAX2
5.84e-60FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_6f790dc23557ff5dbf38505fda0c03ffp@chr18:3456189..3456200, +
5.84e-60FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_6f790dc23557ff5dbf38505fda0c03ffp@chr18:3456189..3456200, +
6.18e-60FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_8339bfeeece9f2f0c194759daa7ba37ap3@PAX2
6.18e-60FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_8339bfeeece9f2f0c194759daa7ba37ap3@PAX2
4.45e-59FFCP PHASE1:Hg19::chr20:6034607..6034616,-#_bbb61e34f072e040a5ba7eb22e39d79ap6@LRRN4
4.45e-59FFCP PHASE2:Hg19::chr20:6034607..6034616,-#_bbb61e34f072e040a5ba7eb22e39d79ap6@LRRN4
3.49e-58FFCP PHASE1:Hg19::chr5:74244100..74244117,+#_b940ce444cda9b60ab64e8d5b2ab8cfap@chr5:74244100..74244117, +
3.49e-58FFCP PHASE2:Hg19::chr5:74244100..74244117,+#_b940ce444cda9b60ab64e8d5b2ab8cfap@chr5:74244100..74244117, +
3.91e-56FFCP PHASE1:Hg19::chr20:6033532..6033548,-#_294a1b4ef40b3bd9383ff0bee67abd75p2@AB527789
3.91e-56FFCP PHASE2:Hg19::chr20:6033532..6033548,-#_294a1b4ef40b3bd9383ff0bee67abd75p2@AB527789
3.83e-55FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_5690119856b8497ad10cf8d20b2f0765p@chr16:86604624..86604648, +
3.83e-55FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_5690119856b8497ad10cf8d20b2f0765p@chr16:86604624..86604648, +
3.51e-54FFCP PHASE1:Hg19::chr16:86768403..86768437,+#_e4240941e8045bb7d962136c61df479dp@chr16:86768403..86768437, +
3.51e-54FFCP PHASE2:Hg19::chr16:86768403..86768437,+#_e4240941e8045bb7d962136c61df479dp@chr16:86768403..86768437, +
6.09e-53FFCP PHASE1:Hg19::chr16:3068288..3068312,-#_f773afba0456101ca7675656f6bebb8fp2@CLDN6
6.09e-53FFCP PHASE2:Hg19::chr16:3068288..3068312,-#_f773afba0456101ca7675656f6bebb8fp2@CLDN6
2.79e-52FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_4214e10c1b7b426bae3e8b4e95b87617p1@ENST00000418041, p1@ENST00000443104
2.79e-52FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_4214e10c1b7b426bae3e8b4e95b87617p1@ENST00000418041, p1@ENST00000443104
1.61e-50FFCP PHASE1:Hg19::chr7:7606139..7606151,-#_4de62a588b0b5ef7aeb2b928a1bfb997p@chr7:7606139..7606151, -
1.61e-50FFCP PHASE2:Hg19::chr7:7606139..7606151,-#_4de62a588b0b5ef7aeb2b928a1bfb997p@chr7:7606139..7606151, -
1.96e-50FFCP PHASE1:Hg19::chr17:36104873..36104903,-#_61c81f2c6327d4b90abf681b3557b50ap3@HNF1B
1.96e-50FFCP PHASE2:Hg19::chr17:36104873..36104903,-#_61c81f2c6327d4b90abf681b3557b50ap3@HNF1B
1.73e-49FFCP PHASE1:Hg19::chr7:140227349..140227360,-#_312ad15e0e61f8fc6eeb313d90ec41c1p@chr7:140227349..140227360, -
1.73e-49FFCP PHASE2:Hg19::chr7:140227349..140227360,-#_312ad15e0e61f8fc6eeb313d90ec41c1p@chr7:140227349..140227360, -
2.61e-49FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_746b7e223efee37b217885a790a24e64p16@HOXA10
2.61e-49FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_746b7e223efee37b217885a790a24e64p16@HOXA10
3.13e-49FFCP PHASE2:Hg19::chr21:41029235..41029269,+#_efd7489a4108724b943640fd53aeafdap2@B3GALT5
3.13e-49FFCP PHASE1:Hg19::chr21:41029235..41029269,+#_efd7489a4108724b943640fd53aeafdap2@B3GALT5
4.07e-49FFCP PHASE1:Hg19::chr9:133986782..133986794,+#_79799592d80d3dcf2e9f4ec2dc14ba6ap4@AIF1L
4.07e-49FFCP PHASE2:Hg19::chr9:133986782..133986794,+#_79799592d80d3dcf2e9f4ec2dc14ba6ap4@AIF1L
1.12e-47FFCP PHASE1:Hg19::chr7:140227303..140227330,-#_6e8b82ec57afc8af77583089a3d32e5ep@chr7:140227303..140227330, -
1.12e-47FFCP PHASE2:Hg19::chr7:140227303..140227330,-#_6e8b82ec57afc8af77583089a3d32e5ep@chr7:140227303..140227330, -
1.23e-44FFCP PHASE1:Hg19::chr20:6034576..6034592,-#_8bc711184cf08487fb9b84e2b6eefff6p3@LRRN4
1.23e-44FFCP PHASE2:Hg19::chr20:6034576..6034592,-#_8bc711184cf08487fb9b84e2b6eefff6p3@LRRN4
3.62e-44FFCP PHASE2:Hg19::chr21:46826248..46826282,-#_774e7114b2c606663d1b92069851c423p@chr21:46826248..46826282, -
3.62e-44FFCP PHASE1:Hg19::chr21:46826248..46826282,-#_774e7114b2c606663d1b92069851c423p@chr21:46826248..46826282, -
3.06e-43FFCP PHASE1:Hg19::chr20:6034672..6034714,-#_495983bce95c4a8e8fc969815396c762p2@LRRN4
3.06e-43FFCP PHASE2:Hg19::chr20:6034672..6034714,-#_495983bce95c4a8e8fc969815396c762p2@LRRN4
1.81e-42FFCP PHASE1:Hg19::chr15:85403302..85403304,+#_c8aae840e42c444976919781c4b1bc07p@chr15:85403302..85403304, +
1.81e-42FFCP PHASE2:Hg19::chr15:85403302..85403304,+#_c8aae840e42c444976919781c4b1bc07p@chr15:85403302..85403304, +
1.82e-42FFCP PHASE2:Hg19::chr7:98453821..98453843,-#_9f992895a4a5894c4bbd359a8ab07387p@chr7:98453821..98453843, -
1.82e-42FFCP PHASE1:Hg19::chr7:98453821..98453843,-#_9f992895a4a5894c4bbd359a8ab07387p@chr7:98453821..98453843, -
2.77e-42FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_d5e652dd7ae4aaa179bad8fdd609a86ap7@LRRN4
2.77e-42FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_d5e652dd7ae4aaa179bad8fdd609a86ap7@LRRN4
7.5e-42FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_8df26beee713a8cd3f493b23b2b6b4d3p2@PAX2
7.5e-42FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_8df26beee713a8cd3f493b23b2b6b4d3p2@PAX2
3.59e-41FFCP PHASE2:Hg19::chr9:71735910..71735923,+#_7c358f0d969598fb8b6fca1b0f6a9467p16@TJP2
3.59e-41FFCP PHASE1:Hg19::chr9:71735910..71735923,+#_7c358f0d969598fb8b6fca1b0f6a9467p16@TJP2
9.39e-41FFCP PHASE2:Hg19::chr1:94713418..94713436,+#_35d303e99a8c7fdd2522e78094db495cp1@ENST00000413103
9.39e-41FFCP PHASE1:Hg19::chr1:94713418..94713436,+#_35d303e99a8c7fdd2522e78094db495cp1@ENST00000413103
1.7e-40FFCP PHASE1:Hg19::chr20:6034828..6034857,-#_43e7703b57cb7342fabd5821dbae7e25p5@LRRN4
1.7e-40FFCP PHASE2:Hg19::chr20:6034828..6034857,-#_43e7703b57cb7342fabd5821dbae7e25p5@LRRN4
2.9e-40FFCP PHASE2:Hg19::chr1:20465872..20465881,+#_b92e0e4bed809c7dc159ec9306e1e315p2@PLA2G2F
2.9e-40FFCP PHASE1:Hg19::chr1:20465872..20465881,+#_b92e0e4bed809c7dc159ec9306e1e315p2@PLA2G2F
8.58e-40FFCP PHASE2:Hg19::chr9:133986807..133986821,+#_b49bf4fb886ee330d69e79650ccace7bp3@AIF1L
8.58e-40FFCP PHASE1:Hg19::chr9:133986807..133986821,+#_b49bf4fb886ee330d69e79650ccace7bp3@AIF1L
1.21e-39FFCP PHASE1:Hg19::chr2:31361432..31361442,-#_896c555ac2153673c53dc0c7d82d52b9p6@GALNT14
1.21e-39FFCP PHASE2:Hg19::chr2:31361432..31361442,-#_896c555ac2153673c53dc0c7d82d52b9p6@GALNT14
3.08e-39FFCP PHASE1:Hg19::chr20:6033120..6033128,-#_808c42c473519fe6bbc065bc3980303fp4@AB527789
3.08e-39FFCP PHASE2:Hg19::chr20:6033120..6033128,-#_808c42c473519fe6bbc065bc3980303fp4@AB527789
7.42e-37FFCP PHASE1:Hg19::chr6:24358114..24358125,-#_0912ba5de1f8584e7812371de74a3ee8p4@DCDC2
7.42e-37FFCP PHASE2:Hg19::chr6:24358114..24358125,-#_0912ba5de1f8584e7812371de74a3ee8p4@DCDC2
1.29e-36FFCP PHASE1:Hg19::chr2:693362..693373,+#_11f799c675840eae7fd703f561427869p@chr2:693362..693373, +
1.29e-36FFCP PHASE2:Hg19::chr2:693362..693373,+#_11f799c675840eae7fd703f561427869p@chr2:693362..693373, +
1.36e-36FFCP PHASE2:Hg19::chr2:177016336..177016350,+#_3c3b8100c5b406eb0eccfbe46d3a6323p1@HOXD4
1.36e-36FFCP PHASE1:Hg19::chr2:177016336..177016350,+#_3c3b8100c5b406eb0eccfbe46d3a6323p1@HOXD4
6.21e-36FFCP PHASE2:Hg19::chr2:176982078..176982095,+#_aeb21a4b190875c7684bc94b4dfa57c6p@chr2:176982078..176982095, +
6.21e-36FFCP PHASE1:Hg19::chr2:176982078..176982095,+#_aeb21a4b190875c7684bc94b4dfa57c6p@chr2:176982078..176982095, +
2.64e-35FFCP PHASE1:Hg19::chr20:6033140..6033181,-#_938a5612a531ecf93209df635ddd5521p1@AB527789
2.64e-35FFCP PHASE2:Hg19::chr20:6033140..6033181,-#_938a5612a531ecf93209df635ddd5521p1@AB527789
3.85e-35FFCP PHASE2:Hg19::chr2:108994466..108994485,+#_56e18ff4c34592c99c81a80117e61c77p3@SULT1C4
3.85e-35FFCP PHASE1:Hg19::chr2:108994466..108994485,+#_56e18ff4c34592c99c81a80117e61c77p3@SULT1C4
8.14e-35FFCP PHASE2:Hg19::chr18:43405633..43405645,+#_4c0c9416f1df60e84aef24ddafe30d3ap4@SIGLEC15
8.14e-35FFCP PHASE1:Hg19::chr18:43405633..43405645,+#_4c0c9416f1df60e84aef24ddafe30d3ap4@SIGLEC15
1.65e-34FFCP PHASE2:Hg19::chr10:91043420..91043437,+#_8ec8a8057bf2da38dbb35dd66430dfc4p1@ENST00000444849
1.65e-34FFCP PHASE1:Hg19::chr10:91043420..91043437,+#_8ec8a8057bf2da38dbb35dd66430dfc4p1@ENST00000444849
1.14e-33FFCP PHASE1:Hg19::chr17:171147..171161,+#_436c39ff6a29ce67ef0ef1102968a96fp@chr17:171147..171161, +
1.14e-33FFCP PHASE2:Hg19::chr17:171147..171161,+#_436c39ff6a29ce67ef0ef1102968a96fp@chr17:171147..171161, +
1.52e-33FFCP PHASE1:Hg19::chr14:57960456..57960478,-#_b8c2c9b0bfacac5d693739b0251bfbf0p2@C14orf105
1.52e-33FFCP PHASE2:Hg19::chr14:57960456..57960478,-#_b8c2c9b0bfacac5d693739b0251bfbf0p2@C14orf105
1.8e-33FFCP PHASE1:Hg19::chr2:31361543..31361564,-#_ba7145e6ca27c17ca2603b495a9ca2a0p5@GALNT14
1.8e-33FFCP PHASE2:Hg19::chr2:31361543..31361564,-#_ba7145e6ca27c17ca2603b495a9ca2a0p5@GALNT14
2.35e-33FFCP PHASE2:Hg19::chr3:190105935..190105966,+#_5a600bdb78fb101783610e716fe86d16p1@CLDN16
2.35e-33FFCP PHASE1:Hg19::chr3:190105935..190105966,+#_5a600bdb78fb101783610e716fe86d16p1@CLDN16
4.12e-33FFCP PHASE1:Hg19::chr17:36065029..36065045,-#_3d4807ad33cc38e9024e38c54ed33393p@chr17:36065029..36065045, -
4.12e-33FFCP PHASE2:Hg19::chr17:36065029..36065045,-#_3d4807ad33cc38e9024e38c54ed33393p@chr17:36065029..36065045, -
8.12e-33FFCP PHASE2:Hg19::chr17:35293950..35293973,-#_1bda3e14d5c341d6c54e766c31fe578dp1@ENST00000528383, p1@ENST00000529264, p1@ENST00000532387
8.12e-33FFCP PHASE1:Hg19::chr17:35293950..35293973,-#_1bda3e14d5c341d6c54e766c31fe578dp1@ENST00000528383, p1@ENST00000529264, p1@ENST00000532387
1.25e-32FFCP PHASE2:Hg19::chr22:30653574..30653606,-#_89ee207196d2f8b8fdfb071713cfe119p@chr22:30653574..30653606, -
1.25e-32FFCP PHASE1:Hg19::chr22:30653574..30653606,-#_89ee207196d2f8b8fdfb071713cfe119p@chr22:30653574..30653606, -

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