CL:0000058: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=chondroblast | |name=chondroblast | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:28, 12 September 2014
| Name: | chondroblast | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An immature cartilage-producing cell found in growing cartilage." [GOC:tfm, ISBN:0618947256] | ||
| Xrefs: |
| ||
| Synonyms: | "chrondoplast" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000055(non-terminally differentiated cell),CL:0002320(connective tissue cell) |
|---|---|
| develops_from: | CL:0007009(prechondroblast) |
Children
| is a: | FF:0000036 (chondroblast) |
|---|---|
| develops from: | CL:0000138 (chondrocyte) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000058 (chondroblast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.17e-105 | FFCP PHASE2:Hg19::chr7:150824026..150824027,-#_1b6577f7d906bd7eee0ca52530a6e180 | p@chr7:150824026..150824027, - |
| 5.17e-105 | FFCP PHASE1:Hg19::chr7:150824026..150824027,-#_1b6577f7d906bd7eee0ca52530a6e180 | p@chr7:150824026..150824027, - |
| 4.67e-75 | FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_f612a2a9ba2f76c87428a2f478adf91a | p@chr8:57359975..57359992, - |
| 4.67e-75 | FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_f612a2a9ba2f76c87428a2f478adf91a | p@chr8:57359975..57359992, - |
| 5.66e-75 | FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_94d04f9ba99a49e113bd7375cf672782 | p@chr8:57353982..57353991, - |
| 5.66e-75 | FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_94d04f9ba99a49e113bd7375cf672782 | p@chr8:57353982..57353991, - |
| 4.26e-74 | FFCP PHASE2:Hg19::chr16:66906996..66906997,-#_f67dfb2b26fe540b536d1e647ffabd6f | p@chr16:66906996..66906997, - |
| 4.26e-74 | FFCP PHASE1:Hg19::chr16:66906996..66906997,-#_f67dfb2b26fe540b536d1e647ffabd6f | p@chr16:66906996..66906997, - |
| 5.47e-74 | FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_c295874b2c9b01bd76e4b3a347b4059f | p@chr8:57354278..57354286, + |
| 5.47e-74 | FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_c295874b2c9b01bd76e4b3a347b4059f | p@chr8:57354278..57354286, + |
| 2.83e-66 | FFCP PHASE2:Hg19::chr12:57628728..57628739,-#_a4ecca36941420580a18ec70450e2786 | p@chr12:57628728..57628739, - |
| 2.83e-66 | FFCP PHASE2:Hg19::chr8:37535618..37535621,+#_a4ecca36941420580a18ec70450e2786 | p@chr8:37535618..37535621, + |
| 2.83e-66 | FFCP PHASE1:Hg19::chr8:37535618..37535621,+#_a4ecca36941420580a18ec70450e2786 | p@chr8:37535618..37535621, + |
| 2.83e-66 | FFCP PHASE2:Hg19::chr21:40033882..40033887,-#_a4ecca36941420580a18ec70450e2786 | p21@ERG |
| 2.83e-66 | FFCP PHASE1:Hg19::chr21:40033882..40033887,-#_a4ecca36941420580a18ec70450e2786 | p21@ERG |
| 2.83e-66 | FFCP PHASE1:Hg19::chr12:57628728..57628739,-#_a4ecca36941420580a18ec70450e2786 | p@chr12:57628728..57628739, - |
| 5.13e-66 | FFCP PHASE2:Hg19::chr15:89402148..89402159,+#_efe872d3ca14446714357d7f47f443b4 | p6@ACAN |
| 5.13e-66 | FFCP PHASE1:Hg19::chr15:89402148..89402159,+#_efe872d3ca14446714357d7f47f443b4 | p6@ACAN |
| 1.63e-59 | FFCP PHASE1:Hg19::chr12:57629315..57629334,-#_df8e54ec6eefb226083dc508a8862758 | p@chr12:57629315..57629334, - |
| 1.63e-59 | FFCP PHASE2:Hg19::chr12:57629315..57629334,-#_df8e54ec6eefb226083dc508a8862758 | p@chr12:57629315..57629334, - |
| 1.63e-59 | FFCP PHASE2:Hg19::chr15:89417758..89417770,+#_df8e54ec6eefb226083dc508a8862758 | p@chr15:89417758..89417770, + |
| 1.63e-59 | FFCP PHASE1:Hg19::chr15:89417758..89417770,+#_df8e54ec6eefb226083dc508a8862758 | p@chr15:89417758..89417770, + |
| 1.82e-59 | FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_f6cab851b013816932c0de9eb2efd414 | p@chr8:57354143..57354152, + |
| 1.82e-59 | FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_f6cab851b013816932c0de9eb2efd414 | p@chr8:57354143..57354152, + |
| 4.12e-59 | FFCP PHASE2:Hg19::chr15:89402048..89402061,+#_e429d423f215a10c2c977bcd032d108c | p8@ACAN |
| 4.12e-59 | FFCP PHASE1:Hg19::chr15:89402048..89402061,+#_e429d423f215a10c2c977bcd032d108c | p8@ACAN |
| 7.47e-59 | FFCP PHASE1:Hg19::chr12:54651599..54651610,-#_8271630f8449a46169117ff6d2ed7f47 | p40@CBX5 |
| 7.47e-59 | FFCP PHASE2:Hg19::chr1:186277359..186277362,+#_8271630f8449a46169117ff6d2ed7f47 | p@chr1:186277359..186277362, + |
| 7.47e-59 | FFCP PHASE1:Hg19::chr1:186277359..186277362,+#_8271630f8449a46169117ff6d2ed7f47 | p@chr1:186277359..186277362, + |
| 7.47e-59 | FFCP PHASE2:Hg19::chr12:54651599..54651610,-#_8271630f8449a46169117ff6d2ed7f47 | p40@CBX5 |
| 1.01e-58 | FFCP PHASE1:Hg19::chr1:186273262..186273282,+#_ba2a988b861887957b0367a8f6d7b8ea | p@chr1:186273262..186273282, + |
| 1.01e-58 | FFCP PHASE2:Hg19::chr1:186273262..186273282,+#_ba2a988b861887957b0367a8f6d7b8ea | p@chr1:186273262..186273282, + |
| 1.36e-58 | FFCP PHASE2:Hg19::chr21:39821025..39821046,-#_b0bcb242069f42e684bc7a738aa838e4 | p9@ERG |
| 1.36e-58 | FFCP PHASE1:Hg19::chr21:39821025..39821046,-#_b0bcb242069f42e684bc7a738aa838e4 | p9@ERG |
| 1.82e-58 | FFCP PHASE2:Hg19::chr8:57354262..57354270,+#_b2bd7867a0798f8aba03d80aac7057ad | p@chr8:57354262..57354270, + |
| 1.82e-58 | FFCP PHASE1:Hg19::chr8:57354262..57354270,+#_b2bd7867a0798f8aba03d80aac7057ad | p@chr8:57354262..57354270, + |
| 3.54e-53 | FFCP PHASE2:Hg19::chr8:57353888..57353898,-#_56e58de587cc2da05362a760945cf725 | p@chr8:57353888..57353898, - |
| 3.54e-53 | FFCP PHASE1:Hg19::chr8:57353888..57353898,-#_56e58de587cc2da05362a760945cf725 | p@chr8:57353888..57353898, - |
| 3.84e-50 | FFCP PHASE2:Hg19::chr1:186277186..186277192,+#_f04920e556f534e51a7a1d5a0b466b28 | p@chr1:186277186..186277192, + |
| 3.84e-50 | FFCP PHASE1:Hg19::chr1:186277186..186277192,+#_f04920e556f534e51a7a1d5a0b466b28 | p@chr1:186277186..186277192, + |
| 1.08e-49 | FFCP PHASE2:Hg19::chr15:89381951..89381962,+#_5b23a87aa54dc3a36522bebaa43002b6 | p@chr15:89381951..89381962, + |
| 1.08e-49 | FFCP PHASE1:Hg19::chr15:89381951..89381962,+#_5b23a87aa54dc3a36522bebaa43002b6 | p@chr15:89381951..89381962, + |
| 4.78e-49 | FFCP PHASE1:Hg19::chr12:57629234..57629249,-#_54c2d0dabc7b2c866a13ced8a89e2afc | p@chr12:57629234..57629249, - |
| 4.78e-49 | FFCP PHASE2:Hg19::chr12:57629234..57629249,-#_54c2d0dabc7b2c866a13ced8a89e2afc | p@chr12:57629234..57629249, - |
| 5.83e-49 | FFCP PHASE2:Hg19::chr1:203149716..203149729,-#_4c22cae1f1a2da7b0272a9c7c525849d | p19@CHI3L1 |
| 5.83e-49 | FFCP PHASE1:Hg19::chr1:203149716..203149729,-#_4c22cae1f1a2da7b0272a9c7c525849d | p19@CHI3L1 |
| 3.67e-47 | FFCP PHASE1:Hg19::chr6:112375516..112375536,+#_819841eb7341574d66dc8679841ca30c | p2@WISP3 |
| 3.67e-47 | FFCP PHASE2:Hg19::chr6:112375516..112375536,+#_819841eb7341574d66dc8679841ca30c | p2@WISP3 |
| 1.41e-45 | FFCP PHASE2:Hg19::chr1:203154508..203154518,-#_a653c6276e76290f93e28d9b0bdaf880 | p20@CHI3L1 |
| 1.41e-45 | FFCP PHASE1:Hg19::chr1:203154508..203154518,-#_a653c6276e76290f93e28d9b0bdaf880 | p20@CHI3L1 |
| 9.76e-45 | FFCP PHASE2:Hg19::chr1:186275455..186275462,+#_860788dd0f2c9725bba20f7461ad4f95 | p@chr1:186275455..186275462, + |
| 9.76e-45 | FFCP PHASE1:Hg19::chr1:186275455..186275462,+#_860788dd0f2c9725bba20f7461ad4f95 | p@chr1:186275455..186275462, + |
| 9.76e-45 | FFCP PHASE2:Hg19::chr7:45953092..45953099,+#_860788dd0f2c9725bba20f7461ad4f95 | p@chr7:45953092..45953099, + |
| 9.76e-45 | FFCP PHASE1:Hg19::chr7:45953092..45953099,+#_860788dd0f2c9725bba20f7461ad4f95 | p@chr7:45953092..45953099, + |
| 1.52e-44 | FFCP PHASE2:Hg19::chr17:40998185..40998200,+#_2b0ebbbe1d9214aab7b7f1dcf6dfa3c8 | p@chr17:40998185..40998200, + |
| 1.52e-44 | FFCP PHASE1:Hg19::chr17:40998185..40998200,+#_2b0ebbbe1d9214aab7b7f1dcf6dfa3c8 | p@chr17:40998185..40998200, + |
| 1.52e-44 | FFCP PHASE2:Hg19::chr17:40998201..40998206,+#_2b0ebbbe1d9214aab7b7f1dcf6dfa3c8 | p@chr17:40998201..40998206, + |
| 1.52e-44 | FFCP PHASE1:Hg19::chr17:40998201..40998206,+#_2b0ebbbe1d9214aab7b7f1dcf6dfa3c8 | p@chr17:40998201..40998206, + |
| 1.52e-44 | FFCP PHASE2:Hg19::chr1:186266030..186266037,+#_2b0ebbbe1d9214aab7b7f1dcf6dfa3c8 | p6@PRG4 |
| 1.52e-44 | FFCP PHASE1:Hg19::chr1:186266030..186266037,+#_2b0ebbbe1d9214aab7b7f1dcf6dfa3c8 | p6@PRG4 |
| 1.52e-44 | FFCP PHASE2:Hg19::chr16:69963162..69963192,+#_2b0ebbbe1d9214aab7b7f1dcf6dfa3c8 | p@chr16:69963162..69963192, + |
| 1.52e-44 | FFCP PHASE1:Hg19::chr16:69963162..69963192,+#_2b0ebbbe1d9214aab7b7f1dcf6dfa3c8 | p@chr16:69963162..69963192, + |
| 1.52e-44 | FFCP PHASE2:Hg19::chr9:97563078..97563086,+#_2b0ebbbe1d9214aab7b7f1dcf6dfa3c8 | p@chr9:97563078..97563086, + |
| 1.52e-44 | FFCP PHASE1:Hg19::chr9:97563078..97563086,+#_2b0ebbbe1d9214aab7b7f1dcf6dfa3c8 | p@chr9:97563078..97563086, + |
| 7.53e-44 | FFCP PHASE2:Hg19::chr1:203149741..203149762,-#_7cd1658cc005c2ecd52b8a9d50960d2a | p14@CHI3L1 |
| 7.53e-44 | FFCP PHASE1:Hg19::chr1:203149741..203149762,-#_7cd1658cc005c2ecd52b8a9d50960d2a | p14@CHI3L1 |
| 3.16e-43 | FFCP PHASE1:Hg19::chr15:89401833..89401842,+#_504ed9abac6e8f690afbf7a0542d97b2 | p10@ACAN |
| 3.16e-43 | FFCP PHASE2:Hg19::chr15:89401833..89401842,+#_504ed9abac6e8f690afbf7a0542d97b2 | p10@ACAN |
| 3.65e-43 | FFCP PHASE2:Hg19::chr7:45956964..45956971,+#_b46b4f2253116fa9d597aaef0f657752 | p@chr7:45956964..45956971, + |
| 3.65e-43 | FFCP PHASE2:Hg19::chrX:7077601..7077607,+#_b46b4f2253116fa9d597aaef0f657752 | p17@STS |
| 3.65e-43 | FFCP PHASE1:Hg19::chrX:7077601..7077607,+#_b46b4f2253116fa9d597aaef0f657752 | p17@STS |
| 3.65e-43 | FFCP PHASE1:Hg19::chr7:45956964..45956971,+#_b46b4f2253116fa9d597aaef0f657752 | p@chr7:45956964..45956971, + |
| 6.48e-43 | FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_a5a270e9e21d194299f32521228658a6 | p@chr8:57354360..57354367, + |
| 6.48e-43 | FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_a5a270e9e21d194299f32521228658a6 | p@chr8:57354360..57354367, + |
| 8.63e-43 | FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_35b38ec81b9fc5461fa72337aeda7caf | p@chr8:57353804..57353821, - |
| 8.63e-43 | FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_35b38ec81b9fc5461fa72337aeda7caf | p@chr8:57353804..57353821, - |
| 1.03e-41 | FFCP PHASE2:Hg19::chr1:203152908..203152924,-#_d4d0e3d21439ce63666b99faaa0f23d4 | p@chr1:203152908..203152924, - |
| 1.03e-41 | FFCP PHASE1:Hg19::chr1:203152908..203152924,-#_d4d0e3d21439ce63666b99faaa0f23d4 | p@chr1:203152908..203152924, - |
| 7.63e-41 | FFCP PHASE2:Hg19::chr9:97807545..97807558,+#_951c6205f870d4f47dd744e6aeb706d3 | p@chr9:97807545..97807558, + |
| 7.63e-41 | FFCP PHASE1:Hg19::chr9:97807545..97807558,+#_951c6205f870d4f47dd744e6aeb706d3 | p@chr9:97807545..97807558, + |
| 1.04e-40 | FFCP PHASE2:Hg19::chr8:57353745..57353754,-#_9a771a932beb157d4bd9e7d793dc4ac9 | p@chr8:57353745..57353754, - |
| 1.04e-40 | FFCP PHASE1:Hg19::chr8:57353745..57353754,-#_9a771a932beb157d4bd9e7d793dc4ac9 | p@chr8:57353745..57353754, - |
| 1.57e-40 | FFCP PHASE2:Hg19::chr1:203151964..203151973,-#_c6b3c67d71aa946bfb57d9b261e67c41 | p21@CHI3L1 |
| 1.57e-40 | FFCP PHASE1:Hg19::chr1:203151964..203151973,-#_c6b3c67d71aa946bfb57d9b261e67c41 | p21@CHI3L1 |
| 1.82e-39 | FFCP PHASE2:Hg19::chr1:203148919..203148937,-#_f510908e70517121f5edd41a2ed2095a | p16@CHI3L1 |
| 1.82e-39 | FFCP PHASE1:Hg19::chr1:203148919..203148937,-#_f510908e70517121f5edd41a2ed2095a | p16@CHI3L1 |
| 7.29e-39 | FFCP PHASE2:Hg19::chr7:45956988..45956995,+#_2c95e413de39344a59554bb26386f7be | p@chr7:45956988..45956995, + |
| 7.29e-39 | FFCP PHASE1:Hg19::chr7:45956988..45956995,+#_2c95e413de39344a59554bb26386f7be | p@chr7:45956988..45956995, + |
| 9.74e-39 | FFCP PHASE2:Hg19::chr7:45953320..45953329,+#_e6746582babd34e3a1deee9c47e38364 | p@chr7:45953320..45953329, + |
| 9.74e-39 | FFCP PHASE1:Hg19::chr7:45953320..45953329,+#_e6746582babd34e3a1deee9c47e38364 | p@chr7:45953320..45953329, + |
| 1.3e-38 | FFCP PHASE2:Hg19::chr3:176912032..176912061,-#_2184ff695008db73cb1e02e63875fdd8 | p1@BC070375 |
| 1.3e-38 | FFCP PHASE1:Hg19::chr3:176912032..176912061,-#_2184ff695008db73cb1e02e63875fdd8 | p1@BC070375 |
| 2.18e-38 | FFCP PHASE2:Hg19::chr21:40033695..40033712,-#_7617a4d69c6bf874d414d2af06685a69 | p6@ERG |
| 2.18e-38 | FFCP PHASE1:Hg19::chr21:40033695..40033712,-#_7617a4d69c6bf874d414d2af06685a69 | p6@ERG |
| 5.47e-38 | FFCP PHASE2:Hg19::chr8:57354275..57354292,-#_a3c0b4e842c1f3c2d7af5a2c948e968b | p@chr8:57354275..57354292, - |
| 5.47e-38 | FFCP PHASE1:Hg19::chr8:57354275..57354292,-#_a3c0b4e842c1f3c2d7af5a2c948e968b | p@chr8:57354275..57354292, - |
| 6.3e-38 | FFCP PHASE2:Hg19::chr1:186276499..186276506,+#_4acb6ffb421f9c69f78cd37fcf883427 | p@chr1:186276499..186276506, + |
| 6.3e-38 | FFCP PHASE1:Hg19::chr1:186276499..186276506,+#_4acb6ffb421f9c69f78cd37fcf883427 | p@chr1:186276499..186276506, + |
| 8.66e-38 | FFCP PHASE2:Hg19::chr1:203148495..203148505,-#_35ea744efdf00149555761203dde5613 | p13@CHI3L1 |
| 8.66e-38 | FFCP PHASE1:Hg19::chr1:203148495..203148505,-#_35ea744efdf00149555761203dde5613 | p13@CHI3L1 |
