CL:0000785: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=mature B cell | |name=mature B cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:36, 12 September 2014
| Name: | mature B cell |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A B cell that is mature, having left the bone marrow. Initially, these cells are IgM-positive and IgD-positive, and they can be activated by antigen." [GOC:add, ISBN:0781735149] |
| Synonyms: |
"mature B lymphocyte" EXACT [] "mature B-cell" EXACT [] "mature B-lymphocyte" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000236(B cell) |
|---|---|
| disjoint_from: | CL:0000816(immature B cell),CL:0000817(precursor B cell),CL:0000818(transitional stage B cell) |
| develops_from: | CL:0000818(transitional stage B cell) |
Children
| is a: | CL:0000819 (B-1 B cell),CL:0000980 (plasmablast) |
|---|---|
| develops from: | CL:0000980 (plasmablast) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10631-108I1 (diffuse large B-cell lymphoma cell line:CTB-1)
Mouse (Mus musculus)
- 10631-108I1 (diffuse large B-cell lymphoma cell line:CTB-1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000785 (mature B cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:40991131..40991149,+#_9443419479491508dd9ebe99242273dd | p@chr12:40991131..40991149, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:128270027..128270033,-#_9443419479491508dd9ebe99242273dd | p@chr8:128270027..128270033, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chrX:89012355..89012363,+#_9443419479491508dd9ebe99242273dd | p@chrX:89012355..89012363, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:86415255..86415288,+#_9443419479491508dd9ebe99242273dd | p@chr7:86415255..86415288, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:8808206..8808209,-#_9443419479491508dd9ebe99242273dd | p@chr12:8808206..8808209, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:166581265..166581274,-#_9443419479491508dd9ebe99242273dd | p5@T |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:178947187..178947192,+#_9443419479491508dd9ebe99242273dd | p@chr3:178947187..178947192, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:114291872..114291873,+#_9443419479491508dd9ebe99242273dd | p@chr5:114291872..114291873, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:168236611..168236612,-#_9443419479491508dd9ebe99242273dd | p@chr3:168236611..168236612, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr21:20752389..20752420,-#_9443419479491508dd9ebe99242273dd | p@chr21:20752389..20752420, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr21:20747453..20747465,-#_9443419479491508dd9ebe99242273dd | p@chr21:20747453..20747465, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:79363599..79363606,+#_9443419479491508dd9ebe99242273dd | p@chr3:79363599..79363606, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr15:66464730..66464736,-#_9443419479491508dd9ebe99242273dd | p@chr15:66464730..66464736, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chrX:42727038..42727047,-#_9443419479491508dd9ebe99242273dd | p@chrX:42727038..42727047, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr10:56410468..56410499,-#_9443419479491508dd9ebe99242273dd | p@chr10:56410468..56410499, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:164466441..164466449,+#_9443419479491508dd9ebe99242273dd | p@chr6:164466441..164466449, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:176358284..176358287,-#_9443419479491508dd9ebe99242273dd | p@chr4:176358284..176358287, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:40953942..40953946,+#_9443419479491508dd9ebe99242273dd | p@chr12:40953942..40953946, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:88646759..88646764,+#_9443419479491508dd9ebe99242273dd | p@chr5:88646759..88646764, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:164466345..164466352,+#_9443419479491508dd9ebe99242273dd | p@chr6:164466345..164466352, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:101853882..101853891,-#_9443419479491508dd9ebe99242273dd | p@chr1:101853882..101853891, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:176353908..176353917,-#_9443419479491508dd9ebe99242273dd | p@chr4:176353908..176353917, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr21:20867728..20867731,-#_9443419479491508dd9ebe99242273dd | p@chr21:20867728..20867731, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:26122006..26122011,-#_9443419479491508dd9ebe99242273dd | p@chr11:26122006..26122011, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:17349613..17349631,-#_9443419479491508dd9ebe99242273dd | p8@SDHB |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:128270027..128270033,-#_9443419479491508dd9ebe99242273dd | p@chr8:128270027..128270033, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:77746703..77746711,-#_9443419479491508dd9ebe99242273dd | p9@LRRTM4 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:4313331..4313334,+#_9443419479491508dd9ebe99242273dd | p@chr12:4313331..4313334, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:166581265..166581274,-#_9443419479491508dd9ebe99242273dd | p5@T |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:168337915..168337930,-#_9443419479491508dd9ebe99242273dd | p@chr3:168337915..168337930, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:86415255..86415288,+#_9443419479491508dd9ebe99242273dd | p@chr7:86415255..86415288, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr21:20752617..20752622,-#_9443419479491508dd9ebe99242273dd | p@chr21:20752617..20752622, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:178947187..178947192,+#_9443419479491508dd9ebe99242273dd | p@chr3:178947187..178947192, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr14:106829914..106829921,-#_9443419479491508dd9ebe99242273dd | p1@HM996258, p1@HM996415, p1@HM996438 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr21:20752389..20752420,-#_9443419479491508dd9ebe99242273dd | p@chr21:20752389..20752420, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:166581583..166581586,+#_9443419479491508dd9ebe99242273dd | p@chr6:166581583..166581586, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:39962295..39962305,+#_9443419479491508dd9ebe99242273dd | p@chr6:39962295..39962305, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:8046897..8046900,+#_9443419479491508dd9ebe99242273dd | p@chr4:8046897..8046900, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:79363599..79363606,+#_9443419479491508dd9ebe99242273dd | p@chr3:79363599..79363606, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:117256221..117256231,+#_9443419479491508dd9ebe99242273dd | p@chr12:117256221..117256231, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:164466441..164466449,+#_9443419479491508dd9ebe99242273dd | p@chr6:164466441..164466449, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:138904824..138904829,+#_9443419479491508dd9ebe99242273dd | p@chr9:138904824..138904829, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:176358284..176358287,-#_9443419479491508dd9ebe99242273dd | p@chr4:176358284..176358287, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr15:66464730..66464736,-#_9443419479491508dd9ebe99242273dd | p@chr15:66464730..66464736, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:26124040..26124064,-#_9443419479491508dd9ebe99242273dd | p@chr11:26124040..26124064, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:17349654..17349690,-#_9443419479491508dd9ebe99242273dd | p6@SDHB |
| 1.55e-98 | FFCP PHASE1:Hg19::chr21:20867728..20867731,-#_9443419479491508dd9ebe99242273dd | p@chr21:20867728..20867731, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:88646759..88646764,+#_9443419479491508dd9ebe99242273dd | p@chr5:88646759..88646764, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:17349613..17349631,-#_9443419479491508dd9ebe99242273dd | p8@SDHB |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:122458855..122458857,+#_9443419479491508dd9ebe99242273dd | p16@BCL7A |
| 1.55e-98 | FFCP PHASE2:Hg19::chr14:53594794..53594799,+#_9443419479491508dd9ebe99242273dd | p@chr14:53594794..53594799, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:168236611..168236612,-#_9443419479491508dd9ebe99242273dd | p@chr3:168236611..168236612, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:77746775..77746779,-#_9443419479491508dd9ebe99242273dd | p14@LRRTM4 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:76471146..76471155,+#_9443419479491508dd9ebe99242273dd | p@chr17:76471146..76471155, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:77746703..77746711,-#_9443419479491508dd9ebe99242273dd | p9@LRRTM4 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr10:56410468..56410499,-#_9443419479491508dd9ebe99242273dd | p@chr10:56410468..56410499, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr22:23234780..23234786,+#_9443419479491508dd9ebe99242273dd | p@chr22:23234780..23234786, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:158747347..158747353,+#_9443419479491508dd9ebe99242273dd | p@chr3:158747347..158747353, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:19436672..19436686,+#_9443419479491508dd9ebe99242273dd | p@chr3:19436672..19436686, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:122462770..122462775,+#_9443419479491508dd9ebe99242273dd | p@chr12:122462770..122462775, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr21:20752617..20752622,-#_9443419479491508dd9ebe99242273dd | p@chr21:20752617..20752622, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:166581590..166581596,+#_9443419479491508dd9ebe99242273dd | p@chr6:166581590..166581596, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr14:106829914..106829921,-#_9443419479491508dd9ebe99242273dd | p1@HM996258, p1@HM996415, p1@HM996438 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:39962337..39962342,+#_9443419479491508dd9ebe99242273dd | p@chr6:39962337..39962342, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:8046990..8046993,-#_9443419479491508dd9ebe99242273dd | p@chr4:8046990..8046993, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:76475275..76475285,-#_9443419479491508dd9ebe99242273dd | p@chr17:76475275..76475285, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:6686484..6686491,+#_9443419479491508dd9ebe99242273dd | p@chr3:6686484..6686491, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:166581583..166581586,+#_9443419479491508dd9ebe99242273dd | p@chr6:166581583..166581586, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:77581116..77581120,-#_9443419479491508dd9ebe99242273dd | p@chr2:77581116..77581120, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:40991131..40991149,+#_9443419479491508dd9ebe99242273dd | p@chr12:40991131..40991149, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:8046897..8046900,+#_9443419479491508dd9ebe99242273dd | p@chr4:8046897..8046900, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:39962295..39962305,+#_9443419479491508dd9ebe99242273dd | p@chr6:39962295..39962305, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:3881462..3881469,-#_9443419479491508dd9ebe99242273dd | p@chr4:3881462..3881469, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:4313331..4313334,+#_9443419479491508dd9ebe99242273dd | p@chr12:4313331..4313334, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:114291872..114291873,+#_9443419479491508dd9ebe99242273dd | p@chr5:114291872..114291873, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:17349654..17349690,-#_9443419479491508dd9ebe99242273dd | p6@SDHB |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:168337915..168337930,-#_9443419479491508dd9ebe99242273dd | p@chr3:168337915..168337930, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:76471163..76471166,+#_9443419479491508dd9ebe99242273dd | p@chr17:76471163..76471166, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:26122006..26122011,-#_9443419479491508dd9ebe99242273dd | p@chr11:26122006..26122011, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:77746775..77746779,-#_9443419479491508dd9ebe99242273dd | p14@LRRTM4 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:164466325..164466331,+#_9443419479491508dd9ebe99242273dd | p@chr6:164466325..164466331, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:76471146..76471155,+#_9443419479491508dd9ebe99242273dd | p@chr17:76471146..76471155, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chrX:89012355..89012363,+#_9443419479491508dd9ebe99242273dd | p@chrX:89012355..89012363, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:8808206..8808209,-#_9443419479491508dd9ebe99242273dd | p@chr12:8808206..8808209, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr22:23234780..23234786,+#_9443419479491508dd9ebe99242273dd | p@chr22:23234780..23234786, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:19436672..19436686,+#_9443419479491508dd9ebe99242273dd | p@chr3:19436672..19436686, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:117256221..117256231,+#_9443419479491508dd9ebe99242273dd | p@chr12:117256221..117256231, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:138904824..138904829,+#_9443419479491508dd9ebe99242273dd | p@chr9:138904824..138904829, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:166581590..166581596,+#_9443419479491508dd9ebe99242273dd | p@chr6:166581590..166581596, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:8046990..8046993,-#_9443419479491508dd9ebe99242273dd | p@chr4:8046990..8046993, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:76475275..76475285,-#_9443419479491508dd9ebe99242273dd | p@chr17:76475275..76475285, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:6686484..6686491,+#_9443419479491508dd9ebe99242273dd | p@chr3:6686484..6686491, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:77581116..77581120,-#_9443419479491508dd9ebe99242273dd | p@chr2:77581116..77581120, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:39962337..39962342,+#_9443419479491508dd9ebe99242273dd | p@chr6:39962337..39962342, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr14:53594794..53594799,+#_9443419479491508dd9ebe99242273dd | p@chr14:53594794..53594799, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:122458855..122458857,+#_9443419479491508dd9ebe99242273dd | p16@BCL7A |
| 1.55e-98 | FFCP PHASE2:Hg19::chr21:20747453..20747465,-#_9443419479491508dd9ebe99242273dd | p@chr21:20747453..20747465, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chrX:42727038..42727047,-#_9443419479491508dd9ebe99242273dd | p@chrX:42727038..42727047, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:3881462..3881469,-#_9443419479491508dd9ebe99242273dd | p@chr4:3881462..3881469, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:26124040..26124064,-#_9443419479491508dd9ebe99242273dd | p@chr11:26124040..26124064, - |
