CL:0002040: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=immature NK T cell stage II | |name=immature NK T cell stage II | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2009-10-29T04:13:43Z | |obo_creation_date=2009-10-29T04:13:43Z | ||
|part_of= | |part_of= | ||
Latest revision as of 16:40, 12 September 2014
| Name: | immature NK T cell stage II |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A CD24-low, CD44-negative, NK1.1-negative NK T cell." [GOC:tfm, http://www.immgen.org/index_content.html, PMID:17589542] |
| Synonyms: | "NKT.44-NK1.1-.Th" EXACT [] |
| Comments: | NKT.44-NK1.1-.Th was assigned as an exact synonym based on sorting strategy displayed at immgene.org. |
| Created by: | tmeehan |
| Creation date: | 2009-10-29T04:13:43Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000914(immature NK T cell) |
|---|---|
| develops_from: | CL:0002039(immature NK T cell stage I) |
Children
| develops from: | CL:0002041 (immature NK T cell stage III) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002040 (immature NK T cell stage II), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:200990231..200990238,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr1:200990231..200990238, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr8:67519931..67519935,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr8:67519931..67519935, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:162762231..162762234,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr2:162762231..162762234, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr13:24623546..24623587,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr13:24623546..24623587, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:134707474..134707504,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:134707474..134707504, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr6:128263833..128263838,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr6:128263833..128263838, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr7:117926347..117926353,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr7:117926347..117926353, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:2428062..2428080,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p1@uc003gfa.1 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:11846830..11846860,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr10:11846830..11846860, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr3:192598433..192598481,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr3:192598433..192598481, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:141989111..141989114,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr2:141989111..141989114, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:116857558..116857566,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr9:116857558..116857566, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr15:69972162..69972169,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr15:69972162..69972169, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr8:75251775..75251785,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr8:75251775..75251785, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:72117884..72117889,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr9:72117884..72117889, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr15:92006659..92006679,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p2@uc002bqw.2 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr8:114877856..114877881,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr8:114877856..114877881, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr13:49078833..49078841,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr13:49078833..49078841, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:134707420..134707442,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:134707420..134707442, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:105805755..105805761,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:105805755..105805761, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:175842537..175842553,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:175842537..175842553, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:133657589..133657598,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:133657589..133657598, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:146998057..146998070,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr2:146998057..146998070, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr15:91989101..91989105,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr15:91989101..91989105, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:87797549..87797564,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr9:87797549..87797564, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr16:67022522..67022529,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p12@CES4A |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:14101134..14101143,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr17:14101134..14101143, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr7:19479837..19479844,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr7:19479837..19479844, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr5:24272119..24272147,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr5:24272119..24272147, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr22:46041912..46041915,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr22:46041912..46041915, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:237900222..237900230,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr1:237900222..237900230, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:175842470..175842486,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:175842470..175842486, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr14:22962827..22962830,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p3@uc001weo.2 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr3:152204326..152204345,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr3:152204326..152204345, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr16:67022368..67022374,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr16:67022368..67022374, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:189141918..189141929,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr1:189141918..189141929, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:111448516..111448521,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:111448516..111448521, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:146687090..146687095,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr2:146687090..146687095, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr15:92006720..92006726,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p1@uc002bqw.2 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr8:16739475..16739490,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr8:16739475..16739490, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:176123823..176123829,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:176123823..176123829, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:202521027..202521058,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr2:202521027..202521058, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr21:47278815..47278834,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p6@PCBP3 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:134707449..134707458,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:134707449..134707458, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:175858389..175858405,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:175858389..175858405, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:133657651..133657654,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:133657651..133657654, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chrX:133321044..133321049,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chrX:133321044..133321049, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr8:51970952..51970959,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr8:51970952..51970959, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr15:91989133..91989141,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr15:91989133..91989141, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr21:43982135..43982142,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr21:43982135..43982142, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:14103251..14103258,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr17:14103251..14103258, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:4544914..4544917,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr9:4544914..4544917, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr21:39490932..39490937,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr21:39490932..39490937, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:175842511..175842520,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:175842511..175842520, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr7:38287827..38287832,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr7:38287827..38287832, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:128884938..128884941,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:128884938..128884941, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr8:50081052..50081075,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr8:50081052..50081075, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:146998057..146998070,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr2:146998057..146998070, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr13:24623546..24623587,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr13:24623546..24623587, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:200990231..200990238,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr1:200990231..200990238, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr9:116857558..116857566,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr9:116857558..116857566, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr15:69972162..69972169,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr15:69972162..69972169, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:134707474..134707504,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:134707474..134707504, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr3:192598433..192598481,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr3:192598433..192598481, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr22:46041912..46041915,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr22:46041912..46041915, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr8:75251775..75251785,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr8:75251775..75251785, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr7:117926347..117926353,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr7:117926347..117926353, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr6:128263833..128263838,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr6:128263833..128263838, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr9:72117884..72117889,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr9:72117884..72117889, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr15:92006659..92006679,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p2@uc002bqw.2 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:134707420..134707442,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:134707420..134707442, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:105805755..105805761,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:105805755..105805761, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr8:114877856..114877881,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr8:114877856..114877881, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr15:91989101..91989105,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr15:91989101..91989105, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:175842537..175842553,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:175842537..175842553, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr8:16739475..16739490,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr8:16739475..16739490, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:133657589..133657598,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:133657589..133657598, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr13:49078833..49078841,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr13:49078833..49078841, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:14101134..14101143,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr17:14101134..14101143, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr9:87797549..87797564,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr9:87797549..87797564, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr16:67022522..67022529,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p12@CES4A |
| 5.42e-195 | FFCP PHASE1:Hg19::chr8:67519931..67519935,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr8:67519931..67519935, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr7:19479837..19479844,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr7:19479837..19479844, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:162762231..162762234,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr2:162762231..162762234, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:175842470..175842486,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:175842470..175842486, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:2428062..2428080,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p1@uc003gfa.1 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:141989111..141989114,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr2:141989111..141989114, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:237900222..237900230,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr1:237900222..237900230, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr8:51970952..51970959,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr8:51970952..51970959, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr16:67022368..67022374,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr16:67022368..67022374, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr3:152204326..152204345,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr3:152204326..152204345, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:189141918..189141929,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr1:189141918..189141929, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:111448516..111448521,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:111448516..111448521, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:202521027..202521058,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr2:202521027..202521058, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:176123823..176123829,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:176123823..176123829, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr15:92006720..92006726,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p1@uc002bqw.2 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:134707449..134707458,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr4:134707449..134707458, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr21:47278815..47278834,+#_3fff15c3e6e566144fd12ae9c1f25e6c | p6@PCBP3 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr5:24272119..24272147,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr5:24272119..24272147, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr8:50081052..50081075,-#_3fff15c3e6e566144fd12ae9c1f25e6c | p@chr8:50081052..50081075, - |
