CL:0002251: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=epithelial cell of alimentary canal | |name=epithelial cell of alimentary canal | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2010-09-08T09:26:53Z | |obo_creation_date=2010-09-08T09:26:53Z | ||
|part_of=UBERON:0001555 | |part_of=UBERON:0001555 | ||
Latest revision as of 16:41, 12 September 2014
| Name: | epithelial cell of alimentary canal |
|---|---|
| Namespace: | FANTOM |
| Definition: | "An epithelial cell of the musculomembranous digestive tube extending from the mouth to the anus." [GOC:tfm, ISBN:0721662544] |
| Created by: | tmeehan |
| Creation date: | 2010-09-08T09:26:53Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002076(endo-epithelial cell) |
|---|---|
| part_of: | UBERON:0001555(digestive tract) |
Children
| is a: | CL:0000682 (M cell of gut),CL:0002166 (epithelial cell of Malassez),CL:0002170 (keratinized cell of the oral mucosa),CL:0002178 (epithelial cell of stomach),CL:0002252 (epithelial cell of esophagus),CL:0002563 (intestinal epithelial cell),CL:0002621 (gingival epithelial cell),CL:1001596 (salivary gland glandular cell) |
|---|---|
| derives from: | FF:0100790 (pharyngeal cancer cell line sample),FF:0102211 (oral squamous cell carcinoma cell line sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10434-106E2 (oral squamous cell carcinoma cell line:Ca9-22)
- 10436-106E4 (signet ring carcinoma cell line:Kato III)
- 10511-107D7
- 10512-107D8
- 10513-107D9 (colon carcinoma cell line:CACO-2)
- 10523-107F1
- 10532-107G1
- 10537-107G6
- 10544-107H4 (oral squamous cell carcinoma cell line:SAS)
... further results Mouse (Mus musculus)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10434-106E2 (oral squamous cell carcinoma cell line:Ca9-22)
- 10436-106E4 (signet ring carcinoma cell line:Kato III)
- 10511-107D7
- 10512-107D8
- 10513-107D9 (colon carcinoma cell line:CACO-2)
- 10523-107F1
- 10532-107G1
- 10537-107G6
- 10544-107H4 (oral squamous cell carcinoma cell line:SAS)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002251 (epithelial cell of alimentary canal), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.97e-77 | FFCP PHASE2:Mm9::chr8:122335239..122335244,+#_3a9ebee0556296f778917fc9cd4dfcf9 | p@chr8:122335239..122335244, + |
| 4.97e-77 | FFCP PHASE1:Mm9::chr8:122335239..122335244,+#_3a9ebee0556296f778917fc9cd4dfcf9 | p@chr8:122335239..122335244, + |
| 1.86e-71 | FFCP PHASE1:Mm9::chr17:57201412..57201418,-#_5d02c5c8aa69521d457f0d58a0ff29b4 | p@chr17:57201412..57201418, - |
| 1.86e-71 | FFCP PHASE2:Mm9::chr17:57201412..57201418,-#_5d02c5c8aa69521d457f0d58a0ff29b4 | p@chr17:57201412..57201418, - |
| 1.41e-68 | FFCP PHASE1:Mm9::chr4:155434167..155434177,+#_246a2bb74098783258fc3993abba0a1c | p@chr4:155434167..155434177, + |
| 1.41e-68 | FFCP PHASE2:Mm9::chr4:155434167..155434177,+#_246a2bb74098783258fc3993abba0a1c | p@chr4:155434167..155434177, + |
| 1.7e-67 | FFCP PHASE2:Mm9::chr8:64192378..64192389,+#_f26a716760003c7f800e870b6a6e30fd | p@chr8:64192378..64192389, + |
| 1.7e-67 | FFCP PHASE1:Mm9::chr8:64192378..64192389,+#_f26a716760003c7f800e870b6a6e30fd | p@chr8:64192378..64192389, + |
| 3.55e-65 | FFCP PHASE2:Mm9::chr3:122215917..122215967,-#_b3d941adc66253b176faef24dc04ca4e | p@chr3:122215917..122215967, - |
| 3.55e-65 | FFCP PHASE1:Mm9::chr3:122215917..122215967,-#_b3d941adc66253b176faef24dc04ca4e | p@chr3:122215917..122215967, - |
| 7.03e-65 | FFCP PHASE1:Mm9::chr2:143738263..143738267,+#_f09c207864714499e3e319391f8c76c5 | p@chr2:143738263..143738267, + |
| 7.03e-65 | FFCP PHASE2:Mm9::chr2:143738263..143738267,+#_f09c207864714499e3e319391f8c76c5 | p@chr2:143738263..143738267, + |
| 2.43e-61 | FFCP PHASE2:Mm9::chr5:135465906..135465912,+#_a0c04cb8f39c5e6a841464b526d935fc | p@chr5:135465906..135465912, + |
| 2.43e-61 | FFCP PHASE1:Mm9::chr5:135465906..135465912,+#_a0c04cb8f39c5e6a841464b526d935fc | p@chr5:135465906..135465912, + |
| 5.84e-61 | FFCP PHASE2:Mm9::chr7:4101973..4101978,-#_060aecfe905d7a00355849df980ffa6c | p4@Leng9 |
| 5.84e-61 | FFCP PHASE1:Mm9::chr7:4101973..4101978,-#_060aecfe905d7a00355849df980ffa6c | p4@Leng9 |
| 1.29e-60 | FFCP PHASE2:Mm9::chr7:4101821..4101832,-#_5bd62426d8b559d69a07f664a203c12f | p5@Leng9 |
| 1.29e-60 | FFCP PHASE1:Mm9::chr7:4101821..4101832,-#_5bd62426d8b559d69a07f664a203c12f | p5@Leng9 |
| 5.24e-58 | FFCP PHASE2:Mm9::chr12:86771033..86771037,-#_2bd04d55fb31ab8494cc70b51d84b91b | p@chr12:86771033..86771037, - |
| 5.24e-58 | FFCP PHASE1:Mm9::chr12:86771033..86771037,-#_2bd04d55fb31ab8494cc70b51d84b91b | p@chr12:86771033..86771037, - |
| 6.35e-57 | FFCP PHASE1:Mm9::chr5:145119593..145119596,+#_2a9ce5bd45b9947bc72db8d2be5ab83a | p@chr5:145119593..145119596, + |
| 6.35e-57 | FFCP PHASE2:Mm9::chr5:145119593..145119596,+#_2a9ce5bd45b9947bc72db8d2be5ab83a | p@chr5:145119593..145119596, + |
| 8.86e-57 | FFCP PHASE2:Mm9::chr13:49066571..49066574,-#_4f03b4768131b90941d66160fcca9d85 | p@chr13:49066571..49066574, - |
| 8.86e-57 | FFCP PHASE1:Mm9::chr13:49066571..49066574,-#_4f03b4768131b90941d66160fcca9d85 | p@chr13:49066571..49066574, - |
| 1.46e-56 | FFCP PHASE1:Mm9::chr11:96797681..96797709,-#_26a90e2028d475db2244826dc5778abd | p@chr11:96797681..96797709, - |
| 1.46e-56 | FFCP PHASE2:Mm9::chr11:96797681..96797709,-#_26a90e2028d475db2244826dc5778abd | p@chr11:96797681..96797709, - |
| 2.19e-56 | FFCP PHASE1:Mm9::chr18:36576247..36576252,-#_2a3c7895fb51207223985eb4a3cdfc26 | p@chr18:36576247..36576252, - |
| 2.19e-56 | FFCP PHASE2:Mm9::chr18:36576247..36576252,-#_2a3c7895fb51207223985eb4a3cdfc26 | p@chr18:36576247..36576252, - |
| 5.47e-56 | FFCP PHASE1:Mm9::chr9:66888939..66888949,+#_51b116bc23c22c7c9dce2ed70cb709e6 | p@chr9:66888939..66888949, + |
| 5.47e-56 | FFCP PHASE2:Mm9::chr9:66888939..66888949,+#_51b116bc23c22c7c9dce2ed70cb709e6 | p@chr9:66888939..66888949, + |
| 6.45e-56 | FFCP PHASE2:Mm9::chr17:46693370..46693378,+#_3645da7113330ba5e5b36700c464f5b6 | p@chr17:46693370..46693378, + |
| 6.45e-56 | FFCP PHASE1:Mm9::chr17:46693370..46693378,+#_3645da7113330ba5e5b36700c464f5b6 | p@chr17:46693370..46693378, + |
| 1.93e-53 | FFCP PHASE1:Mm9::chr7:52317191..52317193,+#_380eaa359cac613b23ec468af994f76b | p@chr7:52317191..52317193, + |
| 1.93e-53 | FFCP PHASE2:Mm9::chr7:52317191..52317193,+#_380eaa359cac613b23ec468af994f76b | p@chr7:52317191..52317193, + |
| 2.55e-53 | FFCP PHASE2:Mm9::chr5:135442713..135442733,+#_332b4e3d9494ece360e762e2df53615b | p@chr5:135442713..135442733, + |
| 2.55e-53 | FFCP PHASE1:Mm9::chr5:135442713..135442733,+#_332b4e3d9494ece360e762e2df53615b | p@chr5:135442713..135442733, + |
| 5.3e-53 | FFCP PHASE1:Mm9::chr2:38781010..38781017,+#_26e06edb5ab79d651312768d83740430 | p@chr2:38781010..38781017, + |
| 5.3e-53 | FFCP PHASE2:Mm9::chr2:38781010..38781017,+#_26e06edb5ab79d651312768d83740430 | p@chr2:38781010..38781017, + |
| 3.46e-52 | FFCP PHASE1:Mm9::chr10:80565428..80565433,+#_b1778979f87b23e85b38f9cf494d639f | p@chr10:80565428..80565433, + |
| 3.46e-52 | FFCP PHASE2:Mm9::chr10:80565428..80565433,+#_b1778979f87b23e85b38f9cf494d639f | p@chr10:80565428..80565433, + |
| 7.4e-52 | FFCP PHASE1:Mm9::chr11:35759012..35759018,+#_dce7fcfe662a63012c60b3e39f192fb5 | p@chr11:35759012..35759018, + |
| 7.4e-52 | FFCP PHASE2:Mm9::chr11:35759012..35759018,+#_dce7fcfe662a63012c60b3e39f192fb5 | p@chr11:35759012..35759018, + |
| 1.0e-51 | FFCP PHASE1:Mm9::chr18:66636209..66636215,-#_c482f06dc2514759290098b243507e81 | p@chr18:66636209..66636215, - |
| 1.0e-51 | FFCP PHASE2:Mm9::chr18:66636209..66636215,-#_c482f06dc2514759290098b243507e81 | p@chr18:66636209..66636215, - |
| 1.17e-51 | FFCP PHASE1:Mm9::chr16:78268076..78268083,-#_7cc88e135be484e96145e33649845d89 | p@chr16:78268076..78268083, - |
| 1.17e-51 | FFCP PHASE2:Mm9::chr16:78268076..78268083,-#_7cc88e135be484e96145e33649845d89 | p@chr16:78268076..78268083, - |
| 3.47e-50 | FFCP PHASE2:Mm9::chr16:30055801..30055806,+#_36f505cdc1229077edb4ae42937fddc3 | p@chr16:30055801..30055806, + |
| 3.47e-50 | FFCP PHASE1:Mm9::chr16:30055801..30055806,+#_36f505cdc1229077edb4ae42937fddc3 | p@chr16:30055801..30055806, + |
| 5.12e-50 | FFCP PHASE1:Mm9::chr7:19814309..19814320,+#_25049529acb9f90fc94af16a89ac4ab5 | p@chr7:19814309..19814320, + |
| 5.12e-50 | FFCP PHASE2:Mm9::chr7:19814309..19814320,+#_25049529acb9f90fc94af16a89ac4ab5 | p@chr7:19814309..19814320, + |
| 7.55e-50 | FFCP PHASE2:Mm9::chr16:91548532..91548555,-#_3ab727e27d8a1741e54e06327746e96c | p@chr16:91548532..91548555, - |
| 7.55e-50 | FFCP PHASE1:Mm9::chr16:91548532..91548555,-#_3ab727e27d8a1741e54e06327746e96c | p@chr16:91548532..91548555, - |
| 3.13e-49 | FFCP PHASE2:Mm9::chr15:77670701..77670706,+#_d4ad94c65ccaac812906da414ae60bb0 | p@chr15:77670701..77670706, + |
| 3.13e-49 | FFCP PHASE1:Mm9::chr15:77670701..77670706,+#_d4ad94c65ccaac812906da414ae60bb0 | p@chr15:77670701..77670706, + |
| 1.47e-48 | FFCP PHASE2:Mm9::chr5:32270354..32270364,-#_3d40ab8965de1f99e36a92967a0911d3 | p@chr5:32270354..32270364, - |
| 1.47e-48 | FFCP PHASE1:Mm9::chr5:32270354..32270364,-#_3d40ab8965de1f99e36a92967a0911d3 | p@chr5:32270354..32270364, - |
| 1.47e-48 | FFCP PHASE2:Mm9::chr3:126314780..126314810,-#_3d40ab8965de1f99e36a92967a0911d3 | p@chr3:126314780..126314810, - |
| 1.47e-48 | FFCP PHASE1:Mm9::chr3:126314780..126314810,-#_3d40ab8965de1f99e36a92967a0911d3 | p@chr3:126314780..126314810, - |
| 3.07e-48 | FFCP PHASE1:Mm9::chr12:111682896..111682907,+#_9f6b91c7868010c70d9468ef46e0f698 | p@chr12:111682896..111682907, + |
| 3.07e-48 | FFCP PHASE2:Mm9::chr12:111682896..111682907,+#_9f6b91c7868010c70d9468ef46e0f698 | p@chr12:111682896..111682907, + |
| 4.07e-48 | FFCP PHASE1:Mm9::chr2:84491058..84491102,+#_6a99a86d71fd23bac62663434875c9c3 | p@chr2:84491058..84491102, + |
| 4.07e-48 | FFCP PHASE2:Mm9::chr2:84491058..84491102,+#_6a99a86d71fd23bac62663434875c9c3 | p@chr2:84491058..84491102, + |
| 4.98e-48 | FFCP PHASE2:Mm9::chr1:90912298..90912303,+#_0bfb4d7aa4c6a40ee5acec2b41c0b6e7 | p3@1700067G17Rik |
| 4.98e-48 | FFCP PHASE1:Mm9::chr1:90912298..90912303,+#_0bfb4d7aa4c6a40ee5acec2b41c0b6e7 | p3@1700067G17Rik |
| 6.85e-48 | FFCP PHASE1:Mm9::chr15:100568814..100568821,-#_20b498d739e3743dfc1e129176606680 | p@chr15:100568814..100568821, - |
| 6.85e-48 | FFCP PHASE2:Mm9::chr15:100568814..100568821,-#_20b498d739e3743dfc1e129176606680 | p@chr15:100568814..100568821, - |
| 1.78e-47 | FFCP PHASE1:Mm9::chr2:167904248..167904260,+#_08711854095697db2c3867cf3f2da76a | p@chr2:167904248..167904260, + |
| 1.78e-47 | FFCP PHASE2:Mm9::chr2:167904248..167904260,+#_08711854095697db2c3867cf3f2da76a | p@chr2:167904248..167904260, + |
| 2.02e-47 | FFCP PHASE2:Mm9::chr10:19251573..19251584,+#_a129cc08708f03773b86d1b813b33ac5 | p@chr10:19251573..19251584, + |
| 2.02e-47 | FFCP PHASE1:Mm9::chr10:19251573..19251584,+#_a129cc08708f03773b86d1b813b33ac5 | p@chr10:19251573..19251584, + |
| 3.29e-47 | FFCP PHASE2:Mm9::chr9:66888952..66888964,+#_ad3d7d2431db55459e4ecffe337751ff | p@chr9:66888952..66888964, + |
| 3.29e-47 | FFCP PHASE1:Mm9::chr9:66888952..66888964,+#_ad3d7d2431db55459e4ecffe337751ff | p@chr9:66888952..66888964, + |
| 1.12e-46 | FFCP PHASE2:Mm9::chr1:36331417..36331462,+#_fb365a36271a21acab30798e8cc91c94 | p@chr1:36331417..36331462, + |
| 1.12e-46 | FFCP PHASE1:Mm9::chr1:36331417..36331462,+#_fb365a36271a21acab30798e8cc91c94 | p@chr1:36331417..36331462, + |
| 3.4e-45 | FFCP PHASE2:Mm9::chr15:83305098..83305104,+#_3471c72cbb73825a93c726bec47b02e4 | p@chr15:83305098..83305104, + |
| 3.4e-45 | FFCP PHASE1:Mm9::chr15:83305098..83305104,+#_3471c72cbb73825a93c726bec47b02e4 | p@chr15:83305098..83305104, + |
| 3.4e-45 | FFCP PHASE2:Mm9::chr8:126155114..126155118,+#_3471c72cbb73825a93c726bec47b02e4 | p1@uc009nwl.1 |
| 3.4e-45 | FFCP PHASE1:Mm9::chr8:126155114..126155118,+#_3471c72cbb73825a93c726bec47b02e4 | p1@uc009nwl.1 |
| 6.51e-45 | FFCP PHASE1:Mm9::chr7:20335303..20335317,+#_6b1b7be6f13ee6bbd85cdab1e2cd6c77 | p@chr7:20335303..20335317, + |
| 6.51e-45 | FFCP PHASE2:Mm9::chr7:20335303..20335317,+#_6b1b7be6f13ee6bbd85cdab1e2cd6c77 | p@chr7:20335303..20335317, + |
| 7.31e-45 | FFCP PHASE1:Mm9::chr5:135442349..135442362,-#_687a3da78d67f45fde1fc8a1b9016343 | p@chr5:135442349..135442362, - |
| 7.31e-45 | FFCP PHASE2:Mm9::chr5:135442349..135442362,-#_687a3da78d67f45fde1fc8a1b9016343 | p@chr5:135442349..135442362, - |
| 1.85e-44 | FFCP PHASE1:Mm9::chr5:145015979..145015991,-#_d338bafdcc739a75447c873db7a6a063 | p@chr5:145015979..145015991, - |
| 1.85e-44 | FFCP PHASE2:Mm9::chr5:145015979..145015991,-#_d338bafdcc739a75447c873db7a6a063 | p@chr5:145015979..145015991, - |
| 1.85e-44 | FFCP PHASE1:Mm9::chr4:62163210..62163216,-#_d338bafdcc739a75447c873db7a6a063 | p3@Hdhd3 |
| 1.85e-44 | FFCP PHASE2:Mm9::chr4:62163210..62163216,-#_d338bafdcc739a75447c873db7a6a063 | p3@Hdhd3 |
| 1.86e-44 | FFCP PHASE1:Mm9::chrX:96331285..96331289,-#_4d9a0af4057598fcba2b038a0b8e5cd4 | p@chrX:96331285..96331289, - |
| 1.86e-44 | FFCP PHASE2:Mm9::chrX:96331285..96331289,-#_4d9a0af4057598fcba2b038a0b8e5cd4 | p@chrX:96331285..96331289, - |
| 5.06e-44 | FFCP PHASE2:Mm9::chr7:29382208..29382215,+#_08ae6e7844fea770eec41cd23921a99e | p@chr7:29382208..29382215, + |
| 5.06e-44 | FFCP PHASE1:Mm9::chr7:29382208..29382215,+#_08ae6e7844fea770eec41cd23921a99e | p@chr7:29382208..29382215, + |
| 7.11e-44 | FFCP PHASE2:Mm9::chr14:73507116..73507118,+#_381f7735ddc0dd916fcb83aaf7dd76a4 | p@chr14:73507116..73507118, + |
| 7.11e-44 | FFCP PHASE1:Mm9::chr14:73507116..73507118,+#_381f7735ddc0dd916fcb83aaf7dd76a4 | p@chr14:73507116..73507118, + |
| 9.98e-44 | FFCP PHASE1:Mm9::chr19:6264408..6264418,-#_9fb29cced1c247a7382a9a573d716cd8 | p@chr19:6264408..6264418, - |
| 9.98e-44 | FFCP PHASE2:Mm9::chr11:69778735..69778745,-#_9fb29cced1c247a7382a9a573d716cd8 | p@chr11:69778735..69778745, - |
| 9.98e-44 | FFCP PHASE1:Mm9::chr11:69778735..69778745,-#_9fb29cced1c247a7382a9a573d716cd8 | p@chr11:69778735..69778745, - |
| 9.98e-44 | FFCP PHASE2:Mm9::chr19:6264408..6264418,-#_9fb29cced1c247a7382a9a573d716cd8 | p@chr19:6264408..6264418, - |
| 1.18e-43 | FFCP PHASE2:Mm9::chr5:99756112..99756132,-#_b824502792b609f5e7e928042d60862d | p@chr5:99756112..99756132, - |
| 1.18e-43 | FFCP PHASE1:Mm9::chr5:99756112..99756132,-#_b824502792b609f5e7e928042d60862d | p@chr5:99756112..99756132, - |
| 1.21e-43 | FFCP PHASE1:Mm9::chr4:133369317..133369320,+#_f64fbd11bbccd5b81173bd8e9cf53908 | p@chr4:133369317..133369320, + |
| 1.21e-43 | FFCP PHASE2:Mm9::chr4:133369317..133369320,+#_f64fbd11bbccd5b81173bd8e9cf53908 | p@chr4:133369317..133369320, + |
