CL:0002255: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=stromal cell of endometrium | |name=stromal cell of endometrium | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2010-09-08T09:50:04Z | |obo_creation_date=2010-09-08T09:50:04Z | ||
|part_of=UBERON:0001295 | |part_of=UBERON:0001295 | ||
Latest revision as of 16:41, 12 September 2014
| Name: | stromal cell of endometrium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An epithelial cell that regulates growth and differentiation of the overlying epithelium." [GOC:tfm, PMID:11331626] | ||
| Xrefs: |
| ||
| Created by: | tmeehan | ||
| Creation date: | 2010-09-08T09:50:04Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000499(stromal cell),CL:0002149(epithelial cell of uterus) |
|---|---|
| part_of: | UBERON:0001295(endometrium) |
Children
| derives from: | FF:0101555 (endometrial cancer cell line sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
- 10623-108H2
- 10639-108I9 (serous adenocarcinoma cell line:JHOS-2)
- 10641-109A2
- 10643-109A4 (endometrioid adenocarcinoma cell line:JHUEM-1)
- 10644-109A5
- 10645-109A6
- 10649-109B1
- 10650-109B2
... further results Mouse (Mus musculus)
- 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
- 10623-108H2
- 10639-108I9 (serous adenocarcinoma cell line:JHOS-2)
- 10641-109A2
- 10643-109A4 (endometrioid adenocarcinoma cell line:JHUEM-1)
- 10644-109A5
- 10645-109A6
- 10649-109B1
- 10650-109B2
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002255 (stromal cell of endometrium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-66 | FFCP PHASE2:Hg19::chr20:30943898..30943899,-#_8f801785ced97fad41dc783122cc21b5 | p@chr20:30943898..30943899, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr2:22353663..22353666,+#_8f801785ced97fad41dc783122cc21b5 | p@chr2:22353663..22353666, + |
| 2.83e-66 | FFCP PHASE2:Hg19::chr2:22353663..22353666,+#_8f801785ced97fad41dc783122cc21b5 | p@chr2:22353663..22353666, + |
| 2.83e-66 | FFCP PHASE1:Hg19::chr20:30943898..30943899,-#_8f801785ced97fad41dc783122cc21b5 | p@chr20:30943898..30943899, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr3:168726935..168726936,-#_8f801785ced97fad41dc783122cc21b5 | p@chr3:168726935..168726936, - |
| 2.83e-66 | FFCP PHASE2:Hg19::chr3:168726935..168726936,-#_8f801785ced97fad41dc783122cc21b5 | p@chr3:168726935..168726936, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr9:88496176..88496181,+#_8f801785ced97fad41dc783122cc21b5 | p@chr9:88496176..88496181, + |
| 2.83e-66 | FFCP PHASE2:Hg19::chr9:88496176..88496181,+#_8f801785ced97fad41dc783122cc21b5 | p@chr9:88496176..88496181, + |
| 3.67e-66 | FFCP PHASE1:Hg19::chr7:150006580..150006590,+#_253801283d8baf00e920f3778d8839e4 | p6@LRRC61 |
| 3.67e-66 | FFCP PHASE2:Hg19::chr7:150006580..150006590,+#_253801283d8baf00e920f3778d8839e4 | p6@LRRC61 |
| 1.82e-59 | FFCP PHASE1:Hg19::chr11:13984141..13984144,+#_00f0dcda0211ac567ae2cc3093519392 | p6@SPON1 |
| 1.82e-59 | FFCP PHASE2:Hg19::chr11:13984141..13984144,+#_00f0dcda0211ac567ae2cc3093519392 | p6@SPON1 |
| 4.05e-53 | FFCP PHASE1:Hg19::chr2:113982581..113982590,-#_61ace8fd8f93bc9da3752cf64c70ed9b | p@chr2:113982581..113982590, - |
| 4.05e-53 | FFCP PHASE2:Hg19::chr2:113982581..113982590,-#_61ace8fd8f93bc9da3752cf64c70ed9b | p@chr2:113982581..113982590, - |
| 1.05e-49 | FFCP PHASE1:Hg19::chr6:75178505..75178516,+#_38135ea662069d1b50f9acfbc1c96983 | p@chr6:75178505..75178516, + |
| 1.05e-49 | FFCP PHASE2:Hg19::chr6:75178505..75178516,+#_38135ea662069d1b50f9acfbc1c96983 | p@chr6:75178505..75178516, + |
| 9.76e-45 | FFCP PHASE1:Hg19::chr11:13974012..13974015,-#_d75e0256121ae6cfa4a7439c7f77dc39 | p@chr11:13974012..13974015, - |
| 9.76e-45 | FFCP PHASE1:Hg19::chr6:42724431..42724435,+#_d75e0256121ae6cfa4a7439c7f77dc39 | p@chr6:42724431..42724435, + |
| 9.76e-45 | FFCP PHASE2:Hg19::chr6:42724431..42724435,+#_d75e0256121ae6cfa4a7439c7f77dc39 | p@chr6:42724431..42724435, + |
| 9.76e-45 | FFCP PHASE2:Hg19::chr11:13974012..13974015,-#_d75e0256121ae6cfa4a7439c7f77dc39 | p@chr11:13974012..13974015, - |
| 1.22e-44 | FFCP PHASE1:Hg19::chr17:37809300..37809309,+#_1fa40cadddd2c9e1a20203ada6d0c22b | p13@STARD3 |
| 1.22e-44 | FFCP PHASE1:Hg19::chr8:101588316..101588317,-#_1fa40cadddd2c9e1a20203ada6d0c22b | p1@AK127517 |
| 1.22e-44 | FFCP PHASE2:Hg19::chr8:101588316..101588317,-#_1fa40cadddd2c9e1a20203ada6d0c22b | p1@AK127517 |
| 1.22e-44 | FFCP PHASE2:Hg19::chr17:37809300..37809309,+#_1fa40cadddd2c9e1a20203ada6d0c22b | p13@STARD3 |
| 6.48e-43 | FFCP PHASE2:Hg19::chr11:16916978..16916996,-#_2c0ae580021a7481389b98046ca1c451 | p@chr11:16916978..16916996, - |
| 6.48e-43 | FFCP PHASE1:Hg19::chr11:16916978..16916996,-#_2c0ae580021a7481389b98046ca1c451 | p@chr11:16916978..16916996, - |
| 9.19e-38 | FFCP PHASE1:Hg19::chr4:19711103..19711108,+#_0c0017931017e83c4f49afe84eacc63b | p@chr4:19711103..19711108, + |
| 9.19e-38 | FFCP PHASE2:Hg19::chr4:19711103..19711108,+#_0c0017931017e83c4f49afe84eacc63b | p@chr4:19711103..19711108, + |
| 1.72e-37 | FFCP PHASE2:Hg19::chr5:8984611..8984621,-#_bdd8363c2639ac4719885227f6158d29 | p@chr5:8984611..8984621, - |
| 1.72e-37 | FFCP PHASE1:Hg19::chr5:8984611..8984621,-#_bdd8363c2639ac4719885227f6158d29 | p@chr5:8984611..8984621, - |
| 1.42e-36 | FFCP PHASE2:Hg19::chr2:113982635..113982648,-#_4e330b2d0eb86f6010fe98db6b7309a2 | p8@PAX8 |
| 1.42e-36 | FFCP PHASE1:Hg19::chr2:113982635..113982648,-#_4e330b2d0eb86f6010fe98db6b7309a2 | p8@PAX8 |
| 6.14e-36 | FFCP PHASE2:Hg19::chr13:23458336..23458347,+#_21657de7cf0a84ba1c3739b62262257d | p@chr13:23458336..23458347, + |
| 6.14e-36 | FFCP PHASE1:Hg19::chr13:23458336..23458347,+#_21657de7cf0a84ba1c3739b62262257d | p@chr13:23458336..23458347, + |
| 4.27e-34 | FFCP PHASE1:Hg19::chr13:85397447..85397450,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr13:85397447..85397450, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr1:81428697..81428704,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr1:81428697..81428704, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr4:95680517..95680526,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr4:95680517..95680526, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr14:84320708..84320731,+#_b8828d0e9beef469ca48f7b3476074cf | p@chr14:84320708..84320731, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr4:95680517..95680526,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr4:95680517..95680526, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr11:61897578..61897585,+#_b8828d0e9beef469ca48f7b3476074cf | p10@INCENP |
| 4.27e-34 | FFCP PHASE1:Hg19::chr7:6312923..6312932,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr7:6312923..6312932, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr7:6312923..6312932,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr7:6312923..6312932, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr7:119683648..119683658,+#_b8828d0e9beef469ca48f7b3476074cf | p@chr7:119683648..119683658, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr12:79349337..79349347,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr12:79349337..79349347, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr14:33147559..33147570,+#_b8828d0e9beef469ca48f7b3476074cf | p@chr14:33147559..33147570, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr7:119683648..119683658,+#_b8828d0e9beef469ca48f7b3476074cf | p@chr7:119683648..119683658, + |
| 4.27e-34 | FFCP PHASE1:Hg19::chr6:31097301..31097322,+#_b8828d0e9beef469ca48f7b3476074cf | p@chr6:31097301..31097322, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr13:85397447..85397450,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr13:85397447..85397450, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr1:81428697..81428704,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr1:81428697..81428704, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr6:31097301..31097322,+#_b8828d0e9beef469ca48f7b3476074cf | p@chr6:31097301..31097322, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr19:28782435..28782439,+#_b8828d0e9beef469ca48f7b3476074cf | p@chr19:28782435..28782439, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr1:197927638..197927639,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr1:197927638..197927639, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr4:95680548..95680553,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr4:95680548..95680553, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr11:61897578..61897585,+#_b8828d0e9beef469ca48f7b3476074cf | p10@INCENP |
| 4.27e-34 | FFCP PHASE2:Hg19::chr4:95680548..95680553,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr4:95680548..95680553, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr8:120220206..120220214,+#_b8828d0e9beef469ca48f7b3476074cf | p23@MAL2 |
| 4.27e-34 | FFCP PHASE1:Hg19::chr14:84320708..84320731,+#_b8828d0e9beef469ca48f7b3476074cf | p@chr14:84320708..84320731, + |
| 4.27e-34 | FFCP PHASE1:Hg19::chr19:28782435..28782439,+#_b8828d0e9beef469ca48f7b3476074cf | p@chr19:28782435..28782439, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr8:120220206..120220214,+#_b8828d0e9beef469ca48f7b3476074cf | p23@MAL2 |
| 4.27e-34 | FFCP PHASE1:Hg19::chr1:197927638..197927639,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr1:197927638..197927639, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr4:162584094..162584130,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr4:162584094..162584130, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr4:162584094..162584130,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr4:162584094..162584130, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr12:79349337..79349347,-#_b8828d0e9beef469ca48f7b3476074cf | p@chr12:79349337..79349347, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr14:33147559..33147570,+#_b8828d0e9beef469ca48f7b3476074cf | p@chr14:33147559..33147570, + |
| 5.98e-34 | FFCP PHASE1:Hg19::chr7:154497207..154497243,-#_8715004d670c07d9c9ce46fcba8a113a | p@chr7:154497207..154497243, - |
| 5.98e-34 | FFCP PHASE2:Hg19::chr7:154497207..154497243,-#_8715004d670c07d9c9ce46fcba8a113a | p@chr7:154497207..154497243, - |
| 5.98e-34 | FFCP PHASE1:Hg19::chr1:159836049..159836056,+#_8715004d670c07d9c9ce46fcba8a113a | p@chr1:159836049..159836056, + |
| 5.98e-34 | FFCP PHASE2:Hg19::chr1:159836049..159836056,+#_8715004d670c07d9c9ce46fcba8a113a | p@chr1:159836049..159836056, + |
| 8.35e-34 | FFCP PHASE1:Hg19::chr2:220080970..220081009,-#_99afaf86a3be616965309a1895eb712c | p16@ABCB6 |
| 8.35e-34 | FFCP PHASE2:Hg19::chr2:220080970..220081009,-#_99afaf86a3be616965309a1895eb712c | p16@ABCB6 |
| 8.35e-34 | FFCP PHASE1:Hg19::chr4:19457174..19457178,+#_99afaf86a3be616965309a1895eb712c | p3@ENST00000511431 |
| 8.35e-34 | FFCP PHASE2:Hg19::chr4:19457174..19457178,+#_99afaf86a3be616965309a1895eb712c | p3@ENST00000511431 |
| 9.39e-34 | FFCP PHASE1:Hg19::chr22:28901919..28901924,+#_47abf1e2b99384ca0744bc5366bde79d | p@chr22:28901919..28901924, + |
| 9.39e-34 | FFCP PHASE2:Hg19::chr22:28901919..28901924,+#_47abf1e2b99384ca0744bc5366bde79d | p@chr22:28901919..28901924, + |
| 9.87e-34 | FFCP PHASE1:Hg19::chr6:161736275..161736279,-#_e83bfe8ee7c736c786e125c5bbc03bae | p@chr6:161736275..161736279, - |
| 9.87e-34 | FFCP PHASE2:Hg19::chr6:161736275..161736279,-#_e83bfe8ee7c736c786e125c5bbc03bae | p@chr6:161736275..161736279, - |
| 9.26e-30 | FFCP PHASE2:Hg19::chr2:113990903..113990907,-#_3887704c881ef1c1e9234f73d0f942c0 | p@chr2:113990903..113990907, - |
| 9.26e-30 | FFCP PHASE1:Hg19::chr2:113990903..113990907,-#_3887704c881ef1c1e9234f73d0f942c0 | p@chr2:113990903..113990907, - |
| 7.1e-28 | FFCP PHASE2:Hg19::chr2:113981834..113981850,-#_903cec008be661709a121dff609e657a | p@chr2:113981834..113981850, - |
| 7.1e-28 | FFCP PHASE1:Hg19::chr2:113981834..113981850,-#_903cec008be661709a121dff609e657a | p@chr2:113981834..113981850, - |
| 7.39e-28 | FFCP PHASE2:Hg19::chr1:206288186..206288203,-#_133d34d287d66f8833b8f59f64eee7c6 | p1@C1orf186 |
| 7.39e-28 | FFCP PHASE1:Hg19::chr1:206288186..206288203,-#_133d34d287d66f8833b8f59f64eee7c6 | p1@C1orf186 |
| 2.32e-27 | FFCP PHASE2:Hg19::chr2:113979656..113979676,-#_d08014c5b7b86371f837a1e125a7672d | p@chr2:113979656..113979676, - |
| 2.32e-27 | FFCP PHASE1:Hg19::chr2:113979656..113979676,-#_d08014c5b7b86371f837a1e125a7672d | p@chr2:113979656..113979676, - |
| 2.38e-27 | FFCP PHASE2:Hg19::chr11:74751521..74751532,+#_c3f098ff1ab9c551fe3324d7b60f1816 | p@chr11:74751521..74751532, + |
| 2.38e-27 | FFCP PHASE1:Hg19::chr11:12061317..12061323,-#_c3f098ff1ab9c551fe3324d7b60f1816 | p@chr11:12061317..12061323, - |
| 2.38e-27 | FFCP PHASE2:Hg19::chr11:12061317..12061323,-#_c3f098ff1ab9c551fe3324d7b60f1816 | p@chr11:12061317..12061323, - |
| 2.38e-27 | FFCP PHASE1:Hg19::chr12:113644361..113644365,+#_c3f098ff1ab9c551fe3324d7b60f1816 | p@chr12:113644361..113644365, + |
| 2.38e-27 | FFCP PHASE1:Hg19::chr11:74751521..74751532,+#_c3f098ff1ab9c551fe3324d7b60f1816 | p@chr11:74751521..74751532, + |
| 2.38e-27 | FFCP PHASE2:Hg19::chr12:113644361..113644365,+#_c3f098ff1ab9c551fe3324d7b60f1816 | p@chr12:113644361..113644365, + |
| 2.72e-27 | FFCP PHASE1:Hg19::chr4:69929665..69929672,+#_5eb784ce9e72445c80c31dbd649250ab | p@chr4:69929665..69929672, + |
| 2.72e-27 | FFCP PHASE2:Hg19::chr4:69929665..69929672,+#_5eb784ce9e72445c80c31dbd649250ab | p@chr4:69929665..69929672, + |
| 3.11e-27 | FFCP PHASE1:Hg19::chr13:37363331..37363344,-#_f0e288215db00e3f0003134add429e96 | p@chr13:37363331..37363344, - |
| 3.11e-27 | FFCP PHASE2:Hg19::chr15:75045404..75045444,+#_f0e288215db00e3f0003134add429e96 | p@chr15:75045404..75045444, + |
| 3.11e-27 | FFCP PHASE1:Hg19::chr16:34981355..34981367,+#_f0e288215db00e3f0003134add429e96 | p2@ENST00000516373 |
| 3.11e-27 | FFCP PHASE2:Hg19::chr13:37363331..37363344,-#_f0e288215db00e3f0003134add429e96 | p@chr13:37363331..37363344, - |
| 3.11e-27 | FFCP PHASE1:Hg19::chr15:75045404..75045444,+#_f0e288215db00e3f0003134add429e96 | p@chr15:75045404..75045444, + |
| 3.11e-27 | FFCP PHASE2:Hg19::chr16:34981355..34981367,+#_f0e288215db00e3f0003134add429e96 | p2@ENST00000516373 |
| 2.36e-24 | FFCP PHASE2:Hg19::chr1:153599635..153599646,-#_dc7fc0462d1f40d70509938c821bad74 | p17@S100A13 |
| 2.36e-24 | FFCP PHASE1:Hg19::chr1:153599635..153599646,-#_dc7fc0462d1f40d70509938c821bad74 | p17@S100A13 |
