DOID:154: Difference between revisions
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|name=mixed cell type cancer | |name=mixed cell type cancer | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:49, 12 September 2014
| Name: | mixed cell type cancer | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A cell type cancer that has_material_basis_in abnormally proliferating cells derived_from two germinal layers of tissue." [url:http://medical-dictionary.thefreedictionary.com/mixed+neoplasm] | ||
| Xrefs: |
| ||
| Synonyms: |
"malignant mixed cancer" EXACT [] "malignant mixed neoplasm" EXACT [NCI2004_11_17:C3729] "malignant mixed tumor" RELATED [] "mixed neoplasm" RELATED [] "mixed tumor" EXACT [NCI2004_11_17:C6930] "mixed tumor, malignant (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:8145008] "mixed tumor, malignant, NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189802003] | ||
| Alt_id: | DOID:1905 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:0050687(cell type cancer) |
|---|
Children
| is a: | DOID:4236 (carcinosarcoma) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10642-109A3 (carcinosarcoma cell line:JHUCS-1)
- 10689-109F5 (mixed mullerian tumor cell line:HTMMT)
Mouse (Mus musculus)
- 10642-109A3 (carcinosarcoma cell line:JHUCS-1)
- 10689-109F5 (mixed mullerian tumor cell line:HTMMT)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:154 (mixed cell type cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE2:Hg19::chr18:63096932..63096933,+#_a833f1bb3702328918f74bb006a3484c | p@chr18:63096932..63096933, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr18:63096932..63096933,+#_a833f1bb3702328918f74bb006a3484c | p@chr18:63096932..63096933, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:146741072..146741077,+#_a833f1bb3702328918f74bb006a3484c | p@chr7:146741072..146741077, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:146741072..146741077,+#_a833f1bb3702328918f74bb006a3484c | p@chr7:146741072..146741077, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr2:156009264..156009270,-#_0899bc8f0b4111b174f9a60c1d9ee7fa | p@chr2:156009264..156009270, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:5999833..5999837,-#_0899bc8f0b4111b174f9a60c1d9ee7fa | p@chr6:5999833..5999837, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr2:156009264..156009270,-#_0899bc8f0b4111b174f9a60c1d9ee7fa | p@chr2:156009264..156009270, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:5999833..5999837,-#_0899bc8f0b4111b174f9a60c1d9ee7fa | p@chr6:5999833..5999837, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chrX:31582142..31582159,+#_0899bc8f0b4111b174f9a60c1d9ee7fa | p@chrX:31582142..31582159, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chrX:31582142..31582159,+#_0899bc8f0b4111b174f9a60c1d9ee7fa | p@chrX:31582142..31582159, + |
| 1.22e-44 | FFCP PHASE1:Hg19::chr13:37575605..37575619,+#_a96cbd2cde36e6b00d63b989c4dc412a | p4@EXOSC8 |
| 1.22e-44 | FFCP PHASE2:Hg19::chr13:37575605..37575619,+#_a96cbd2cde36e6b00d63b989c4dc412a | p4@EXOSC8 |
| 5.99e-41 | FFCP PHASE1:Hg19::chr12:57619653..57619657,+#_1428dec201c586ad5b0fe19f4e11d70f | p3@NXPH4 |
| 5.99e-41 | FFCP PHASE2:Hg19::chr12:57619653..57619657,+#_1428dec201c586ad5b0fe19f4e11d70f | p3@NXPH4 |
| 3.61e-34 | FFCP PHASE1:Hg19::chr18:63091237..63091256,+#_d2cf12f8e46a728335bcb5d31b4e9541 | p@chr18:63091237..63091256, + |
| 3.61e-34 | FFCP PHASE2:Hg19::chr18:63091237..63091256,+#_d2cf12f8e46a728335bcb5d31b4e9541 | p@chr18:63091237..63091256, + |
| 3.61e-34 | FFCP PHASE2:Hg19::chr9:22141969..22141972,+#_d2cf12f8e46a728335bcb5d31b4e9541 | p@chr9:22141969..22141972, + |
| 3.61e-34 | FFCP PHASE1:Hg19::chr9:22141969..22141972,+#_d2cf12f8e46a728335bcb5d31b4e9541 | p@chr9:22141969..22141972, + |
| 5.04e-34 | FFCP PHASE2:Hg19::chr6:144724124..144724133,+#_33251e1485d38272a66bfbff14dac100 | p@chr6:144724124..144724133, + |
| 5.04e-34 | FFCP PHASE1:Hg19::chr6:144724124..144724133,+#_33251e1485d38272a66bfbff14dac100 | p@chr6:144724124..144724133, + |
| 5.04e-34 | FFCP PHASE1:Hg19::chr12:57882498..57882504,-#_33251e1485d38272a66bfbff14dac100 | p39@ARHGAP9 |
| 5.04e-34 | FFCP PHASE2:Hg19::chr4:80976547..80976566,-#_33251e1485d38272a66bfbff14dac100 | p30@ANTXR2 |
| 5.04e-34 | FFCP PHASE1:Hg19::chr4:80976547..80976566,-#_33251e1485d38272a66bfbff14dac100 | p30@ANTXR2 |
| 5.04e-34 | FFCP PHASE2:Hg19::chr12:57882498..57882504,-#_33251e1485d38272a66bfbff14dac100 | p39@ARHGAP9 |
| 7.05e-34 | FFCP PHASE2:Hg19::chr15:75114185..75114190,+#_af7ed254dd532b9df57e4e5ce786788d | p@chr15:75114185..75114190, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr2:38466814..38466823,-#_af7ed254dd532b9df57e4e5ce786788d | p8@ENST00000450854 |
| 7.05e-34 | FFCP PHASE2:Hg19::chr6:33145331..33145378,-#_af7ed254dd532b9df57e4e5ce786788d | p@chr6:33145331..33145378, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr6:33145331..33145378,-#_af7ed254dd532b9df57e4e5ce786788d | p@chr6:33145331..33145378, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr2:38466814..38466823,-#_af7ed254dd532b9df57e4e5ce786788d | p8@ENST00000450854 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr15:32969649..32969656,+#_af7ed254dd532b9df57e4e5ce786788d | p14@SCG5 |
| 7.05e-34 | FFCP PHASE2:Hg19::chr15:32969649..32969656,+#_af7ed254dd532b9df57e4e5ce786788d | p14@SCG5 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr15:75114185..75114190,+#_af7ed254dd532b9df57e4e5ce786788d | p@chr15:75114185..75114190, + |
| 8.05e-30 | FFCP PHASE1:Hg19::chr12:57619841..57619852,+#_5253f8f5d4ea8fed5681af0382a77c7c | p@chr12:57619841..57619852, + |
| 8.05e-30 | FFCP PHASE2:Hg19::chr12:57619841..57619852,+#_5253f8f5d4ea8fed5681af0382a77c7c | p@chr12:57619841..57619852, + |
| 4.08e-26 | FFCP PHASE2:Hg19::chr16:56380852..56380864,+#_73ab1771115ab5b86e15382d2710e04f | p@chr16:56380852..56380864, + |
| 4.08e-26 | FFCP PHASE1:Hg19::chr16:56380852..56380864,+#_73ab1771115ab5b86e15382d2710e04f | p@chr16:56380852..56380864, + |
| 4.32e-26 | FFCP PHASE2:Hg19::chr6:27198345..27198350,-#_1e076d94566eeed0b0952feabd7f0286 | p@chr6:27198345..27198350, - |
| 4.32e-26 | FFCP PHASE1:Hg19::chr6:27198345..27198350,-#_1e076d94566eeed0b0952feabd7f0286 | p@chr6:27198345..27198350, - |
| 5.56e-26 | FFCP PHASE2:Hg19::chr2:187615989..187616000,+#_2bfc781540a0806b7f0498e81e6be2f4 | p@chr2:187615989..187616000, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr7:81635124..81635130,-#_2bfc781540a0806b7f0498e81e6be2f4 | p18@CACNA2D1 |
| 5.56e-26 | FFCP PHASE1:Hg19::chr7:81635124..81635130,-#_2bfc781540a0806b7f0498e81e6be2f4 | p18@CACNA2D1 |
| 5.56e-26 | FFCP PHASE1:Hg19::chr11:22359292..22359301,+#_2bfc781540a0806b7f0498e81e6be2f4 | p9@SLC17A6 |
| 5.56e-26 | FFCP PHASE1:Hg19::chr2:187615989..187616000,+#_2bfc781540a0806b7f0498e81e6be2f4 | p@chr2:187615989..187616000, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr11:22359292..22359301,+#_2bfc781540a0806b7f0498e81e6be2f4 | p9@SLC17A6 |
| 7.14e-26 | FFCP PHASE2:Hg19::chrX:89176902..89176913,+#_153ce32ac7b1be37d85df5847225417b | p1@TGIF2LX |
| 7.14e-26 | FFCP PHASE1:Hg19::chrX:89176902..89176913,+#_153ce32ac7b1be37d85df5847225417b | p1@TGIF2LX |
| 7.14e-26 | FFCP PHASE2:Hg19::chr2:187618737..187618746,+#_153ce32ac7b1be37d85df5847225417b | p@chr2:187618737..187618746, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr2:187618737..187618746,+#_153ce32ac7b1be37d85df5847225417b | p@chr2:187618737..187618746, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr3:165528391..165528411,+#_12982e9875d0fb1792c2b202ac393576 | p@chr3:165528391..165528411, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr3:170424675..170424679,-#_12982e9875d0fb1792c2b202ac393576 | p@chr3:170424675..170424679, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr12:15202725..15202774,+#_12982e9875d0fb1792c2b202ac393576 | p@chr12:15202725..15202774, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr3:170424675..170424679,-#_12982e9875d0fb1792c2b202ac393576 | p@chr3:170424675..170424679, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr12:15202725..15202774,+#_12982e9875d0fb1792c2b202ac393576 | p@chr12:15202725..15202774, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr9:16515712..16515717,-#_12982e9875d0fb1792c2b202ac393576 | p@chr9:16515712..16515717, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr3:165528391..165528411,+#_12982e9875d0fb1792c2b202ac393576 | p@chr3:165528391..165528411, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr9:16515712..16515717,-#_12982e9875d0fb1792c2b202ac393576 | p@chr9:16515712..16515717, - |
| 3.91e-23 | FFCP PHASE1:Hg19::chr14:20813564..20813582,+#_31eed6fd823c0f42f99811e29f4d4e20 | p@chr14:20813564..20813582, + |
| 3.91e-23 | FFCP PHASE2:Hg19::chr14:20813564..20813582,+#_31eed6fd823c0f42f99811e29f4d4e20 | p@chr14:20813564..20813582, + |
| 5.41e-22 | FFCP PHASE2:Hg19::chr5:180708225..180708231,-#_35b3ae5b1a233941e7072ca699e3b5a1 | p@chr5:180708225..180708231, - |
| 5.41e-22 | FFCP PHASE1:Hg19::chr5:180708225..180708231,-#_35b3ae5b1a233941e7072ca699e3b5a1 | p@chr5:180708225..180708231, - |
| 3.11e-21 | FFCP PHASE2:Hg19::chr7:146244949..146244953,+#_6b567ab1d5bfec587881dbec4ffb41d2 | p@chr7:146244949..146244953, + |
| 3.11e-21 | FFCP PHASE1:Hg19::chr7:146244949..146244953,+#_6b567ab1d5bfec587881dbec4ffb41d2 | p@chr7:146244949..146244953, + |
| 3.81e-21 | FFCP PHASE2:Hg19::chr6:144724186..144724199,+#_5269de4b2ef6bf194ed2ada5df033874 | p@chr6:144724186..144724199, + |
| 3.81e-21 | FFCP PHASE1:Hg19::chr6:144724186..144724199,+#_5269de4b2ef6bf194ed2ada5df033874 | p@chr6:144724186..144724199, + |
| 4.66e-21 | FFCP PHASE2:Hg19::chr4:80976472..80976514,-#_7854d393b7cbdecdbee6808bfba2567c | p33@ANTXR2 |
| 4.66e-21 | FFCP PHASE1:Hg19::chr17:70026911..70026922,+#_7854d393b7cbdecdbee6808bfba2567c | p1@uc002jit.1 |
| 4.66e-21 | FFCP PHASE2:Hg19::chr6:83938642..83938649,-#_7854d393b7cbdecdbee6808bfba2567c | p7@ME1 |
| 4.66e-21 | FFCP PHASE1:Hg19::chr6:83938642..83938649,-#_7854d393b7cbdecdbee6808bfba2567c | p7@ME1 |
| 4.66e-21 | FFCP PHASE1:Hg19::chr4:80976472..80976514,-#_7854d393b7cbdecdbee6808bfba2567c | p33@ANTXR2 |
| 4.66e-21 | FFCP PHASE2:Hg19::chr17:70026911..70026922,+#_7854d393b7cbdecdbee6808bfba2567c | p1@uc002jit.1 |
| 5.2e-21 | FFCP PHASE2:Hg19::chr4:19458597..19458623,-#_dd1007f725ba7cd783488d355896e957 | p1@ENST00000505347 |
| 5.2e-21 | FFCP PHASE1:Hg19::chr4:19458597..19458623,-#_dd1007f725ba7cd783488d355896e957 | p1@ENST00000505347 |
| 5.7e-21 | FFCP PHASE2:Hg19::chr1:149875845..149875874,-#_6e7caa96e950dc2075542a527d59d3bb | p@chr1:149875845..149875874, - |
| 5.7e-21 | FFCP PHASE1:Hg19::chr4:80116986..80116991,+#_6e7caa96e950dc2075542a527d59d3bb | p1@ENST00000507476, p1@ENST00000507761, p1@ENST00000515597, p1@uc003hls.2 |
| 5.7e-21 | FFCP PHASE1:Hg19::chr2:118145500..118145514,-#_6e7caa96e950dc2075542a527d59d3bb | p@chr2:118145500..118145514, - |
| 5.7e-21 | FFCP PHASE1:Hg19::chr1:149875845..149875874,-#_6e7caa96e950dc2075542a527d59d3bb | p@chr1:149875845..149875874, - |
| 5.7e-21 | FFCP PHASE2:Hg19::chr9:22216803..22216809,-#_6e7caa96e950dc2075542a527d59d3bb | p@chr9:22216803..22216809, - |
| 5.7e-21 | FFCP PHASE1:Hg19::chr9:22216803..22216809,-#_6e7caa96e950dc2075542a527d59d3bb | p@chr9:22216803..22216809, - |
| 5.7e-21 | FFCP PHASE1:Hg19::chr11:811679..811684,+#_6e7caa96e950dc2075542a527d59d3bb | p2@SNORA52 |
| 5.7e-21 | FFCP PHASE2:Hg19::chr11:811679..811684,+#_6e7caa96e950dc2075542a527d59d3bb | p2@SNORA52 |
| 5.7e-21 | FFCP PHASE2:Hg19::chr4:80116986..80116991,+#_6e7caa96e950dc2075542a527d59d3bb | p1@ENST00000507476, p1@ENST00000507761, p1@ENST00000515597, p1@uc003hls.2 |
| 5.7e-21 | FFCP PHASE2:Hg19::chr2:118145500..118145514,-#_6e7caa96e950dc2075542a527d59d3bb | p@chr2:118145500..118145514, - |
| 6.96e-21 | FFCP PHASE2:Hg19::chr3:47088671..47088676,-#_ccd78e0bcf8088ff3587764926a1fa35 | p28@SETD2 |
| 6.96e-21 | FFCP PHASE1:Hg19::chr15:75114132..75114162,+#_ccd78e0bcf8088ff3587764926a1fa35 | p@chr15:75114132..75114162, + |
| 6.96e-21 | FFCP PHASE1:Hg19::chr3:47088671..47088676,-#_ccd78e0bcf8088ff3587764926a1fa35 | p28@SETD2 |
| 6.96e-21 | FFCP PHASE2:Hg19::chr2:182543992..182543996,-#_ccd78e0bcf8088ff3587764926a1fa35 | p10@NEUROD1 |
| 6.96e-21 | FFCP PHASE2:Hg19::chr15:75114132..75114162,+#_ccd78e0bcf8088ff3587764926a1fa35 | p@chr15:75114132..75114162, + |
| 6.96e-21 | FFCP PHASE2:Hg19::chr2:70900377..70900392,+#_ccd78e0bcf8088ff3587764926a1fa35 | p@chr2:70900377..70900392, + |
| 6.96e-21 | FFCP PHASE1:Hg19::chr2:182543992..182543996,-#_ccd78e0bcf8088ff3587764926a1fa35 | p10@NEUROD1 |
| 6.96e-21 | FFCP PHASE1:Hg19::chr2:70900377..70900392,+#_ccd78e0bcf8088ff3587764926a1fa35 | p@chr2:70900377..70900392, + |
| 9.6e-20 | FFCP PHASE1:Hg19::chr11:31832207..31832226,-#_77b560e4db923341faeadbca4f2449dc | p12@PAX6 |
| 9.6e-20 | FFCP PHASE2:Hg19::chr11:31832207..31832226,-#_77b560e4db923341faeadbca4f2449dc | p12@PAX6 |
| 5.48e-18 | FFCP PHASE2:Hg19::chr7:146192665..146192668,+#_9f552088501b4a803711af91d3399d97 | p@chr7:146192665..146192668, + |
| 5.48e-18 | FFCP PHASE1:Hg19::chr7:146192665..146192668,+#_9f552088501b4a803711af91d3399d97 | p@chr7:146192665..146192668, + |
| 5.48e-18 | FFCP PHASE2:Hg19::chr6:27198375..27198387,-#_9f552088501b4a803711af91d3399d97 | p@chr6:27198375..27198387, - |
| 5.48e-18 | FFCP PHASE1:Hg19::chr6:27198375..27198387,-#_9f552088501b4a803711af91d3399d97 | p@chr6:27198375..27198387, - |
| 6.48e-18 | FFCP PHASE2:Hg19::chr7:54614335..54614351,+#_5ad22da5f2f50597b59303591583adc8 | p19@VSTM2A |
| 6.48e-18 | FFCP PHASE1:Hg19::chr7:54614335..54614351,+#_5ad22da5f2f50597b59303591583adc8 | p19@VSTM2A |
| 7.67e-18 | FFCP PHASE2:Hg19::chr6:150016353..150016358,-#_98240227436c40f67cd4dfe6d9072619 | p@chr6:150016353..150016358, - |
| 7.67e-18 | FFCP PHASE2:Hg19::chr4:120243571..120243587,-#_98240227436c40f67cd4dfe6d9072619 | p3@FABP2 |
