UBERON:0000331: Difference between revisions
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|located_in= | |located_in= | ||
|name=ileal mucosa | |name=ileal mucosa | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002116 | |part_of=UBERON:0002116 | ||
Latest revision as of 17:08, 12 September 2014
| Name: | ileal mucosa | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A mucosa that is part of a ileum [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"Ileal mucous membrane" EXACT [FMA:14956] "Ileum mucosa" EXACT [FMA:14956] "ileum mucosa" EXACT [OBOL:automatic] "ileum mucosa of organ" EXACT [OBOL:automatic] "ileum mucous membrane" EXACT [OBOL:automatic] "ileum organ mucosa" EXACT [OBOL:automatic] "mucosa of ileum" EXACT [OBOL:automatic] "mucosa of organ of ileum" EXACT [OBOL:automatic] "mucous membrane of ileum" EXACT [OBOL:automatic] "organ mucosa of ileum" EXACT [OBOL:automatic] | ||
| Alt_id: | UBERON:BTO_0000619-FMA_14956 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001204(mucosa of small intestine) |
|---|---|
| part_of: | UBERON:0002116(ileum) |
Children
| is a: | FF:0011477 (Ileum epithelium 1h after RANKL),FF:0011479 (Ileum epithelium 3h after RANKL) |
|---|---|
| part of: | UBERON:0008344 (intestinal villus of ileum) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 10252-104B9 (Ileum epithelium, pool1)
- 10253-104C1 (Ileum epithelium, pool2)
- 10254-104C2
- 10255-104C3
- 10256-104C4
- 10257-104C5
- 10258-104C6
- 10259-104C7
- 10260-104C8 (Ileum epithelium, treated with RANKL, day03, pool3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000331 (ileal mucosa), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE2:Mm9::chr11:43412172..43412177,-#_ed353464c86c25b9dca4c008f6c67f63 | p@chr11:43412172..43412177, - |
| 1.58e-86 | FFCP PHASE1:Mm9::chr11:43412172..43412177,-#_ed353464c86c25b9dca4c008f6c67f63 | p@chr11:43412172..43412177, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr16:32477713..32477720,-#_ed353464c86c25b9dca4c008f6c67f63 | p@chr16:32477713..32477720, - |
| 1.58e-86 | FFCP PHASE1:Mm9::chr4:5463968..5463972,+#_ed353464c86c25b9dca4c008f6c67f63 | p@chr4:5463968..5463972, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr16:32477713..32477720,-#_ed353464c86c25b9dca4c008f6c67f63 | p@chr16:32477713..32477720, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr4:5463968..5463972,+#_ed353464c86c25b9dca4c008f6c67f63 | p@chr4:5463968..5463972, + |
| 1.33e-65 | FFCP PHASE1:Mm9::chr11:43412139..43412149,-#_6630149eb6108ea5b8601faddd2efc47 | p@chr11:43412139..43412149, - |
| 1.33e-65 | FFCP PHASE2:Mm9::chr11:43412139..43412149,-#_6630149eb6108ea5b8601faddd2efc47 | p@chr11:43412139..43412149, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr3:80191466..80191470,+#_440e8f315bbcebcdef638282390c3987 | p@chr3:80191466..80191470, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:127165632..127165636,+#_440e8f315bbcebcdef638282390c3987 | p@chr10:127165632..127165636, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:127165632..127165636,+#_440e8f315bbcebcdef638282390c3987 | p@chr10:127165632..127165636, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:70621810..70621814,-#_440e8f315bbcebcdef638282390c3987 | p@chr15:70621810..70621814, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31350252..31350259,-#_440e8f315bbcebcdef638282390c3987 | p13@Slc5a6 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:43412215..43412219,-#_440e8f315bbcebcdef638282390c3987 | p@chr11:43412215..43412219, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:80191466..80191470,+#_440e8f315bbcebcdef638282390c3987 | p@chr3:80191466..80191470, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:43412215..43412219,-#_440e8f315bbcebcdef638282390c3987 | p@chr11:43412215..43412219, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:70621810..70621814,-#_440e8f315bbcebcdef638282390c3987 | p@chr15:70621810..70621814, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31350252..31350259,-#_440e8f315bbcebcdef638282390c3987 | p13@Slc5a6 |
| 4.9e-53 | FFCP PHASE1:Mm9::chr1:174032230..174032242,+#_50cdcb610ad49b50c1cdc07adcbd1602 | p@chr1:174032230..174032242, + |
| 4.9e-53 | FFCP PHASE2:Mm9::chr1:174032230..174032242,+#_50cdcb610ad49b50c1cdc07adcbd1602 | p@chr1:174032230..174032242, + |
| 1.1e-52 | FFCP PHASE1:Mm9::chr1:123242799..123242804,-#_1bbc4ef863a4a0d43eea4328049029f2 | p@chr1:123242799..123242804, - |
| 1.1e-52 | FFCP PHASE2:Mm9::chr1:123242799..123242804,-#_1bbc4ef863a4a0d43eea4328049029f2 | p@chr1:123242799..123242804, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr6:48417827..48417837,+#_fa34902964108284074aaa87b879b3dd | p@chr6:48417827..48417837, + |
| 5.51e-52 | FFCP PHASE1:Mm9::chr6:48417827..48417837,+#_fa34902964108284074aaa87b879b3dd | p@chr6:48417827..48417837, + |
| 5.51e-52 | FFCP PHASE2:Mm9::chr9:7692339..7692366,+#_fa34902964108284074aaa87b879b3dd | p@chr9:7692339..7692366, + |
| 5.51e-52 | FFCP PHASE1:Mm9::chr9:7692339..7692366,+#_fa34902964108284074aaa87b879b3dd | p@chr9:7692339..7692366, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr1:174032263..174032278,+#_0f30e89f0a045844f8ed17c840f03465 | p@chr1:174032263..174032278, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr1:174032263..174032278,+#_0f30e89f0a045844f8ed17c840f03465 | p@chr1:174032263..174032278, + |
| 1.66e-44 | FFCP PHASE2:Mm9::chr11:76730372..76730376,+#_ef6897b1e9330b2b35e33b5f2fbaec15 | p@chr11:76730372..76730376, + |
| 1.66e-44 | FFCP PHASE1:Mm9::chr11:76730372..76730376,+#_ef6897b1e9330b2b35e33b5f2fbaec15 | p@chr11:76730372..76730376, + |
| 2.33e-44 | FFCP PHASE1:Mm9::chr19:6114448..6114456,+#_6e5b1482e8bf1ad4d5da0801174f242f | p@chr19:6114448..6114456, + |
| 2.33e-44 | FFCP PHASE2:Mm9::chr3:65610528..65610533,+#_6e5b1482e8bf1ad4d5da0801174f242f | p@chr3:65610528..65610533, + |
| 2.33e-44 | FFCP PHASE2:Mm9::chr19:6114448..6114456,+#_6e5b1482e8bf1ad4d5da0801174f242f | p@chr19:6114448..6114456, + |
| 2.33e-44 | FFCP PHASE1:Mm9::chr3:65610528..65610533,+#_6e5b1482e8bf1ad4d5da0801174f242f | p@chr3:65610528..65610533, + |
| 1.7e-39 | FFCP PHASE1:Mm9::chr3:6169801..6169806,-#_0572b39498cf9cd5c78ff91a1b15d20c | p@chr3:6169801..6169806, - |
| 1.7e-39 | FFCP PHASE2:Mm9::chr3:6169801..6169806,-#_0572b39498cf9cd5c78ff91a1b15d20c | p@chr3:6169801..6169806, - |
| 2.66e-39 | FFCP PHASE2:Mm9::chr19:6112940..6112946,+#_779e9b029dde209d4d10e7132e22ae61 | p@chr19:6112940..6112946, + |
| 2.66e-39 | FFCP PHASE1:Mm9::chr19:6112940..6112946,+#_779e9b029dde209d4d10e7132e22ae61 | p@chr19:6112940..6112946, + |
| 4.15e-39 | FFCP PHASE2:Mm9::chr5:31350231..31350240,-#_d95f52c505b8e269ec324fbad966ba30 | p12@Slc5a6 |
| 4.15e-39 | FFCP PHASE1:Mm9::chr5:31350231..31350240,-#_d95f52c505b8e269ec324fbad966ba30 | p12@Slc5a6 |
| 1.17e-38 | FFCP PHASE2:Mm9::chr11:43412071..43412093,+#_46bceccfb870f7628d008c6a07b3a932 | p@chr11:43412071..43412093, + |
| 1.17e-38 | FFCP PHASE1:Mm9::chr11:43412071..43412093,+#_46bceccfb870f7628d008c6a07b3a932 | p@chr11:43412071..43412093, + |
| 1.56e-38 | FFCP PHASE1:Mm9::chr3:103636485..103636490,+#_dd4d2ca232d0e6e9d659f5ed6d9b3841 | p3@Bcl2l15 |
| 1.56e-38 | FFCP PHASE2:Mm9::chr3:103636485..103636490,+#_dd4d2ca232d0e6e9d659f5ed6d9b3841 | p3@Bcl2l15 |
| 3.67e-34 | FFCP PHASE2:Mm9::chr11:43412170..43412191,+#_bab4d09e77fb3723e10b9a4978a6e5a7 | p@chr11:43412170..43412191, + |
| 3.67e-34 | FFCP PHASE1:Mm9::chr11:43412170..43412191,+#_bab4d09e77fb3723e10b9a4978a6e5a7 | p@chr11:43412170..43412191, + |
| 4.74e-34 | FFCP PHASE2:Mm9::chr11:43409580..43409591,+#_365c0559e7e72466a2282dbf9abbd3d9 | p@chr11:43409580..43409591, + |
| 4.74e-34 | FFCP PHASE1:Mm9::chr11:43409580..43409591,+#_365c0559e7e72466a2282dbf9abbd3d9 | p@chr11:43409580..43409591, + |
| 6.12e-34 | FFCP PHASE2:Mm9::chr6:40578587..40578594,+#_257069336abe9ab6546750dfc5a76ea7 | p4@Mgam |
| 6.12e-34 | FFCP PHASE1:Mm9::chr6:40578587..40578594,+#_257069336abe9ab6546750dfc5a76ea7 | p4@Mgam |
| 1.02e-33 | FFCP PHASE2:Mm9::chr2:72453221..72453226,-#_164b34b4fdcb87e382dd64d769a528ad | p@chr2:72453221..72453226, - |
| 1.02e-33 | FFCP PHASE1:Mm9::chr2:72453221..72453226,-#_164b34b4fdcb87e382dd64d769a528ad | p@chr2:72453221..72453226, - |
| 1.31e-33 | FFCP PHASE1:Mm9::chr6:78323455..78323458,-#_abc73ad1b26ebc056f3fb7e949a44113 | p@chr6:78323455..78323458, - |
| 1.31e-33 | FFCP PHASE2:Mm9::chr19:6112924..6112937,+#_abc73ad1b26ebc056f3fb7e949a44113 | p@chr19:6112924..6112937, + |
| 1.31e-33 | FFCP PHASE2:Mm9::chr6:78323455..78323458,-#_abc73ad1b26ebc056f3fb7e949a44113 | p@chr6:78323455..78323458, - |
| 1.31e-33 | FFCP PHASE1:Mm9::chr19:6112924..6112937,+#_abc73ad1b26ebc056f3fb7e949a44113 | p@chr19:6112924..6112937, + |
| 2.89e-30 | FFCP PHASE2:Mm9::chr4:138388796..138388811,+#_e7de161ca20820f326cc6334c4dc149a | p3@ENSMUST00000147728 |
| 2.89e-30 | FFCP PHASE1:Mm9::chr4:138388796..138388811,+#_e7de161ca20820f326cc6334c4dc149a | p3@ENSMUST00000147728 |
| 4.03e-30 | FFCP PHASE2:Mm9::chr17:34484746..34484750,+#_477b778b16dce78e7ba9531d810c7419 | p@chr17:34484746..34484750, + |
| 4.03e-30 | FFCP PHASE1:Mm9::chr17:34484746..34484750,+#_477b778b16dce78e7ba9531d810c7419 | p@chr17:34484746..34484750, + |
| 4.03e-30 | FFCP PHASE2:Mm9::chr10:128109355..128109365,-#_477b778b16dce78e7ba9531d810c7419 | p@chr10:128109355..128109365, - |
| 4.03e-30 | FFCP PHASE1:Mm9::chr10:128109355..128109365,-#_477b778b16dce78e7ba9531d810c7419 | p@chr10:128109355..128109365, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr11:27472982..27472983,+#_416531ab340624ed6668aaf319f57ebd | p@chr11:27472982..27472983, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr11:9039303..9039304,+#_416531ab340624ed6668aaf319f57ebd | p@chr11:9039303..9039304, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr8:27020687..27020691,+#_416531ab340624ed6668aaf319f57ebd | p@chr8:27020687..27020691, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr17:43614030..43614038,+#_416531ab340624ed6668aaf319f57ebd | p@chr17:43614030..43614038, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chrX:68120720..68120723,-#_416531ab340624ed6668aaf319f57ebd | p@chrX:68120720..68120723, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr1:40187318..40187321,-#_416531ab340624ed6668aaf319f57ebd | p@chr1:40187318..40187321, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr11:9039303..9039304,+#_416531ab340624ed6668aaf319f57ebd | p@chr11:9039303..9039304, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr4:72564746..72564750,-#_416531ab340624ed6668aaf319f57ebd | p@chr4:72564746..72564750, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr11:106410939..106410940,+#_416531ab340624ed6668aaf319f57ebd | p@chr11:106410939..106410940, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr13:55874724..55874725,-#_416531ab340624ed6668aaf319f57ebd | p@chr13:55874724..55874725, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr18:55496010..55496011,-#_416531ab340624ed6668aaf319f57ebd | p@chr18:55496010..55496011, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr17:43614030..43614038,+#_416531ab340624ed6668aaf319f57ebd | p@chr17:43614030..43614038, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr1:40187318..40187321,-#_416531ab340624ed6668aaf319f57ebd | p@chr1:40187318..40187321, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr9:50047835..50047836,+#_416531ab340624ed6668aaf319f57ebd | p@chr9:50047835..50047836, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr9:50047835..50047836,+#_416531ab340624ed6668aaf319f57ebd | p@chr9:50047835..50047836, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr8:27020687..27020691,+#_416531ab340624ed6668aaf319f57ebd | p@chr8:27020687..27020691, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr11:27472982..27472983,+#_416531ab340624ed6668aaf319f57ebd | p@chr11:27472982..27472983, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr13:17402712..17402716,+#_416531ab340624ed6668aaf319f57ebd | p@chr13:17402712..17402716, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chrX:83991903..83991905,-#_416531ab340624ed6668aaf319f57ebd | p@chrX:83991903..83991905, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr12:103615373..103615374,+#_416531ab340624ed6668aaf319f57ebd | p@chr12:103615373..103615374, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr18:55496010..55496011,-#_416531ab340624ed6668aaf319f57ebd | p@chr18:55496010..55496011, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr13:17402712..17402716,+#_416531ab340624ed6668aaf319f57ebd | p@chr13:17402712..17402716, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr12:103615373..103615374,+#_416531ab340624ed6668aaf319f57ebd | p@chr12:103615373..103615374, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chrX:83991903..83991905,-#_416531ab340624ed6668aaf319f57ebd | p@chrX:83991903..83991905, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr3:20879214..20879216,+#_416531ab340624ed6668aaf319f57ebd | p@chr3:20879214..20879216, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr10:31111154..31111155,+#_416531ab340624ed6668aaf319f57ebd | p@chr10:31111154..31111155, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr13:55874724..55874725,-#_416531ab340624ed6668aaf319f57ebd | p@chr13:55874724..55874725, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr17:4030939..4030944,-#_416531ab340624ed6668aaf319f57ebd | p@chr17:4030939..4030944, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr8:5085607..5085611,-#_416531ab340624ed6668aaf319f57ebd | p@chr8:5085607..5085611, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr18:58306021..58306022,+#_416531ab340624ed6668aaf319f57ebd | p@chr18:58306021..58306022, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr18:58306021..58306022,+#_416531ab340624ed6668aaf319f57ebd | p@chr18:58306021..58306022, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr10:31111154..31111155,+#_416531ab340624ed6668aaf319f57ebd | p@chr10:31111154..31111155, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr8:5085607..5085611,-#_416531ab340624ed6668aaf319f57ebd | p@chr8:5085607..5085611, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr11:106410939..106410940,+#_416531ab340624ed6668aaf319f57ebd | p@chr11:106410939..106410940, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr3:20879214..20879216,+#_416531ab340624ed6668aaf319f57ebd | p@chr3:20879214..20879216, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr17:4030939..4030944,-#_416531ab340624ed6668aaf319f57ebd | p@chr17:4030939..4030944, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chrX:68120720..68120723,-#_416531ab340624ed6668aaf319f57ebd | p@chrX:68120720..68120723, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr4:72564746..72564750,-#_416531ab340624ed6668aaf319f57ebd | p@chr4:72564746..72564750, - |
