Personal tools

UBERON:0004814: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 13: Line 13:
|located_in=
|located_in=
|name=upper respiratory tract epithelium
|name=upper respiratory tract epithelium
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0001557
|part_of=UBERON:0001557

Latest revision as of 17:48, 12 September 2014

Name:upper respiratory tract epithelium
Namespace:FANTOM
Definition:"An epithelium that is part of a upper respiratory tract [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0001912
Synonyms: "epithelial tissue of upper respiratory tract" EXACT [OBOL:automatic]
"epithelium of upper respiratory tract" EXACT [OBOL:automatic]
"upper respiratory tract epithelial tissue" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004802(respiratory tract epithelium)
part_of:UBERON:0001557(upper respiratory tract)



Children

is a:UBERON:0004117 (pharyngeal pouch),UBERON:0005384 (nasal cavity epithelium),UBERON:0007690 (early pharyngeal endoderm),UBERON:0009722 (entire pharyngeal arch endoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004814 (upper respiratory tract epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results