UBERON:0007684: Difference between revisions
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|located_in= | |located_in= | ||
|name=uriniferous tubule | |name=uriniferous tubule | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002113 | |part_of=UBERON:0002113 | ||
Latest revision as of 18:02, 12 September 2014
| Name: | uriniferous tubule | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "functional unit of the kidney that forms urine, consisting of two parts, the nephron and the collecting tubule." [ISBN10:0073040584] | ||
| Xrefs: |
|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003914(epithelial tube),UBERON:0004819(kidney epithelium),UBERON:0006555(excretory tube) |
|---|---|
| part_of: | UBERON:0002113(kidney) |
Children
| part of: | UBERON:0001229 (renal corpuscle),UBERON:0001285 (nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11596-120H3 (Renal Cortical Epithelial Cells, donor2)
- 11597-120H4 (Renal Epithelial Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007684 (uriniferous tubule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.05e-87 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_f96677576a4de2e83aff2134b7333368 | p@chr2:693380..693398, + |
| 1.05e-87 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_f96677576a4de2e83aff2134b7333368 | p@chr2:693380..693398, + |
| 1.72e-83 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_4ba1d3751586316142bcf81658db5340 | p4@MEGF11 |
| 1.72e-83 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_4ba1d3751586316142bcf81658db5340 | p4@MEGF11 |
| 2.2e-74 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_9733f522858eb8c6bda9284f248a13cb | p7@HOXA10 |
| 2.2e-74 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_9733f522858eb8c6bda9284f248a13cb | p7@HOXA10 |
| 7.63e-66 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_f6639e196c49be39dc0e262306507c7f | p@chr1:1100457..1100470, + |
| 7.63e-66 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_f6639e196c49be39dc0e262306507c7f | p@chr1:1100457..1100470, + |
| 6.44e-62 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_d8eeca4ce84a42fea5d3935bac6c88be | p4@PAX2 |
| 6.44e-62 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_d8eeca4ce84a42fea5d3935bac6c88be | p4@PAX2 |
| 5.84e-60 | FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_6f790dc23557ff5dbf38505fda0c03ff | p@chr18:3456189..3456200, + |
| 5.84e-60 | FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_6f790dc23557ff5dbf38505fda0c03ff | p@chr18:3456189..3456200, + |
| 6.18e-60 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_8339bfeeece9f2f0c194759daa7ba37a | p3@PAX2 |
| 6.18e-60 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_8339bfeeece9f2f0c194759daa7ba37a | p3@PAX2 |
| 4.45e-59 | FFCP PHASE1:Hg19::chr20:6034607..6034616,-#_bbb61e34f072e040a5ba7eb22e39d79a | p6@LRRN4 |
| 4.45e-59 | FFCP PHASE2:Hg19::chr20:6034607..6034616,-#_bbb61e34f072e040a5ba7eb22e39d79a | p6@LRRN4 |
| 3.49e-58 | FFCP PHASE1:Hg19::chr5:74244100..74244117,+#_b940ce444cda9b60ab64e8d5b2ab8cfa | p@chr5:74244100..74244117, + |
| 3.49e-58 | FFCP PHASE2:Hg19::chr5:74244100..74244117,+#_b940ce444cda9b60ab64e8d5b2ab8cfa | p@chr5:74244100..74244117, + |
| 3.91e-56 | FFCP PHASE1:Hg19::chr20:6033532..6033548,-#_294a1b4ef40b3bd9383ff0bee67abd75 | p2@AB527789 |
| 3.91e-56 | FFCP PHASE2:Hg19::chr20:6033532..6033548,-#_294a1b4ef40b3bd9383ff0bee67abd75 | p2@AB527789 |
| 3.83e-55 | FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_5690119856b8497ad10cf8d20b2f0765 | p@chr16:86604624..86604648, + |
| 3.83e-55 | FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_5690119856b8497ad10cf8d20b2f0765 | p@chr16:86604624..86604648, + |
| 3.51e-54 | FFCP PHASE1:Hg19::chr16:86768403..86768437,+#_e4240941e8045bb7d962136c61df479d | p@chr16:86768403..86768437, + |
| 3.51e-54 | FFCP PHASE2:Hg19::chr16:86768403..86768437,+#_e4240941e8045bb7d962136c61df479d | p@chr16:86768403..86768437, + |
| 6.09e-53 | FFCP PHASE1:Hg19::chr16:3068288..3068312,-#_f773afba0456101ca7675656f6bebb8f | p2@CLDN6 |
| 6.09e-53 | FFCP PHASE2:Hg19::chr16:3068288..3068312,-#_f773afba0456101ca7675656f6bebb8f | p2@CLDN6 |
| 2.79e-52 | FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_4214e10c1b7b426bae3e8b4e95b87617 | p1@ENST00000418041, p1@ENST00000443104 |
| 2.79e-52 | FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_4214e10c1b7b426bae3e8b4e95b87617 | p1@ENST00000418041, p1@ENST00000443104 |
| 1.61e-50 | FFCP PHASE1:Hg19::chr7:7606139..7606151,-#_4de62a588b0b5ef7aeb2b928a1bfb997 | p@chr7:7606139..7606151, - |
| 1.61e-50 | FFCP PHASE2:Hg19::chr7:7606139..7606151,-#_4de62a588b0b5ef7aeb2b928a1bfb997 | p@chr7:7606139..7606151, - |
| 1.96e-50 | FFCP PHASE1:Hg19::chr17:36104873..36104903,-#_61c81f2c6327d4b90abf681b3557b50a | p3@HNF1B |
| 1.96e-50 | FFCP PHASE2:Hg19::chr17:36104873..36104903,-#_61c81f2c6327d4b90abf681b3557b50a | p3@HNF1B |
| 1.73e-49 | FFCP PHASE1:Hg19::chr7:140227349..140227360,-#_312ad15e0e61f8fc6eeb313d90ec41c1 | p@chr7:140227349..140227360, - |
| 1.73e-49 | FFCP PHASE2:Hg19::chr7:140227349..140227360,-#_312ad15e0e61f8fc6eeb313d90ec41c1 | p@chr7:140227349..140227360, - |
| 2.61e-49 | FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_746b7e223efee37b217885a790a24e64 | p16@HOXA10 |
| 2.61e-49 | FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_746b7e223efee37b217885a790a24e64 | p16@HOXA10 |
| 3.13e-49 | FFCP PHASE2:Hg19::chr21:41029235..41029269,+#_efd7489a4108724b943640fd53aeafda | p2@B3GALT5 |
| 3.13e-49 | FFCP PHASE1:Hg19::chr21:41029235..41029269,+#_efd7489a4108724b943640fd53aeafda | p2@B3GALT5 |
| 4.07e-49 | FFCP PHASE1:Hg19::chr9:133986782..133986794,+#_79799592d80d3dcf2e9f4ec2dc14ba6a | p4@AIF1L |
| 4.07e-49 | FFCP PHASE2:Hg19::chr9:133986782..133986794,+#_79799592d80d3dcf2e9f4ec2dc14ba6a | p4@AIF1L |
| 1.12e-47 | FFCP PHASE1:Hg19::chr7:140227303..140227330,-#_6e8b82ec57afc8af77583089a3d32e5e | p@chr7:140227303..140227330, - |
| 1.12e-47 | FFCP PHASE2:Hg19::chr7:140227303..140227330,-#_6e8b82ec57afc8af77583089a3d32e5e | p@chr7:140227303..140227330, - |
| 1.23e-44 | FFCP PHASE1:Hg19::chr20:6034576..6034592,-#_8bc711184cf08487fb9b84e2b6eefff6 | p3@LRRN4 |
| 1.23e-44 | FFCP PHASE2:Hg19::chr20:6034576..6034592,-#_8bc711184cf08487fb9b84e2b6eefff6 | p3@LRRN4 |
| 3.62e-44 | FFCP PHASE2:Hg19::chr21:46826248..46826282,-#_774e7114b2c606663d1b92069851c423 | p@chr21:46826248..46826282, - |
| 3.62e-44 | FFCP PHASE1:Hg19::chr21:46826248..46826282,-#_774e7114b2c606663d1b92069851c423 | p@chr21:46826248..46826282, - |
| 3.06e-43 | FFCP PHASE1:Hg19::chr20:6034672..6034714,-#_495983bce95c4a8e8fc969815396c762 | p2@LRRN4 |
| 3.06e-43 | FFCP PHASE2:Hg19::chr20:6034672..6034714,-#_495983bce95c4a8e8fc969815396c762 | p2@LRRN4 |
| 1.81e-42 | FFCP PHASE1:Hg19::chr15:85403302..85403304,+#_c8aae840e42c444976919781c4b1bc07 | p@chr15:85403302..85403304, + |
| 1.81e-42 | FFCP PHASE2:Hg19::chr15:85403302..85403304,+#_c8aae840e42c444976919781c4b1bc07 | p@chr15:85403302..85403304, + |
| 1.82e-42 | FFCP PHASE2:Hg19::chr7:98453821..98453843,-#_9f992895a4a5894c4bbd359a8ab07387 | p@chr7:98453821..98453843, - |
| 1.82e-42 | FFCP PHASE1:Hg19::chr7:98453821..98453843,-#_9f992895a4a5894c4bbd359a8ab07387 | p@chr7:98453821..98453843, - |
| 2.77e-42 | FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_d5e652dd7ae4aaa179bad8fdd609a86a | p7@LRRN4 |
| 2.77e-42 | FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_d5e652dd7ae4aaa179bad8fdd609a86a | p7@LRRN4 |
| 7.5e-42 | FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_8df26beee713a8cd3f493b23b2b6b4d3 | p2@PAX2 |
| 7.5e-42 | FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_8df26beee713a8cd3f493b23b2b6b4d3 | p2@PAX2 |
| 3.59e-41 | FFCP PHASE2:Hg19::chr9:71735910..71735923,+#_7c358f0d969598fb8b6fca1b0f6a9467 | p16@TJP2 |
| 3.59e-41 | FFCP PHASE1:Hg19::chr9:71735910..71735923,+#_7c358f0d969598fb8b6fca1b0f6a9467 | p16@TJP2 |
| 9.39e-41 | FFCP PHASE2:Hg19::chr1:94713418..94713436,+#_35d303e99a8c7fdd2522e78094db495c | p1@ENST00000413103 |
| 9.39e-41 | FFCP PHASE1:Hg19::chr1:94713418..94713436,+#_35d303e99a8c7fdd2522e78094db495c | p1@ENST00000413103 |
| 1.7e-40 | FFCP PHASE1:Hg19::chr20:6034828..6034857,-#_43e7703b57cb7342fabd5821dbae7e25 | p5@LRRN4 |
| 1.7e-40 | FFCP PHASE2:Hg19::chr20:6034828..6034857,-#_43e7703b57cb7342fabd5821dbae7e25 | p5@LRRN4 |
| 2.9e-40 | FFCP PHASE2:Hg19::chr1:20465872..20465881,+#_b92e0e4bed809c7dc159ec9306e1e315 | p2@PLA2G2F |
| 2.9e-40 | FFCP PHASE1:Hg19::chr1:20465872..20465881,+#_b92e0e4bed809c7dc159ec9306e1e315 | p2@PLA2G2F |
| 8.58e-40 | FFCP PHASE2:Hg19::chr9:133986807..133986821,+#_b49bf4fb886ee330d69e79650ccace7b | p3@AIF1L |
| 8.58e-40 | FFCP PHASE1:Hg19::chr9:133986807..133986821,+#_b49bf4fb886ee330d69e79650ccace7b | p3@AIF1L |
| 1.21e-39 | FFCP PHASE1:Hg19::chr2:31361432..31361442,-#_896c555ac2153673c53dc0c7d82d52b9 | p6@GALNT14 |
| 1.21e-39 | FFCP PHASE2:Hg19::chr2:31361432..31361442,-#_896c555ac2153673c53dc0c7d82d52b9 | p6@GALNT14 |
| 3.08e-39 | FFCP PHASE1:Hg19::chr20:6033120..6033128,-#_808c42c473519fe6bbc065bc3980303f | p4@AB527789 |
| 3.08e-39 | FFCP PHASE2:Hg19::chr20:6033120..6033128,-#_808c42c473519fe6bbc065bc3980303f | p4@AB527789 |
| 7.42e-37 | FFCP PHASE1:Hg19::chr6:24358114..24358125,-#_0912ba5de1f8584e7812371de74a3ee8 | p4@DCDC2 |
| 7.42e-37 | FFCP PHASE2:Hg19::chr6:24358114..24358125,-#_0912ba5de1f8584e7812371de74a3ee8 | p4@DCDC2 |
| 1.29e-36 | FFCP PHASE1:Hg19::chr2:693362..693373,+#_11f799c675840eae7fd703f561427869 | p@chr2:693362..693373, + |
| 1.29e-36 | FFCP PHASE2:Hg19::chr2:693362..693373,+#_11f799c675840eae7fd703f561427869 | p@chr2:693362..693373, + |
| 1.36e-36 | FFCP PHASE2:Hg19::chr2:177016336..177016350,+#_3c3b8100c5b406eb0eccfbe46d3a6323 | p1@HOXD4 |
| 1.36e-36 | FFCP PHASE1:Hg19::chr2:177016336..177016350,+#_3c3b8100c5b406eb0eccfbe46d3a6323 | p1@HOXD4 |
| 6.21e-36 | FFCP PHASE2:Hg19::chr2:176982078..176982095,+#_aeb21a4b190875c7684bc94b4dfa57c6 | p@chr2:176982078..176982095, + |
| 6.21e-36 | FFCP PHASE1:Hg19::chr2:176982078..176982095,+#_aeb21a4b190875c7684bc94b4dfa57c6 | p@chr2:176982078..176982095, + |
| 2.64e-35 | FFCP PHASE1:Hg19::chr20:6033140..6033181,-#_938a5612a531ecf93209df635ddd5521 | p1@AB527789 |
| 2.64e-35 | FFCP PHASE2:Hg19::chr20:6033140..6033181,-#_938a5612a531ecf93209df635ddd5521 | p1@AB527789 |
| 3.85e-35 | FFCP PHASE2:Hg19::chr2:108994466..108994485,+#_56e18ff4c34592c99c81a80117e61c77 | p3@SULT1C4 |
| 3.85e-35 | FFCP PHASE1:Hg19::chr2:108994466..108994485,+#_56e18ff4c34592c99c81a80117e61c77 | p3@SULT1C4 |
| 8.14e-35 | FFCP PHASE2:Hg19::chr18:43405633..43405645,+#_4c0c9416f1df60e84aef24ddafe30d3a | p4@SIGLEC15 |
| 8.14e-35 | FFCP PHASE1:Hg19::chr18:43405633..43405645,+#_4c0c9416f1df60e84aef24ddafe30d3a | p4@SIGLEC15 |
| 1.65e-34 | FFCP PHASE2:Hg19::chr10:91043420..91043437,+#_8ec8a8057bf2da38dbb35dd66430dfc4 | p1@ENST00000444849 |
| 1.65e-34 | FFCP PHASE1:Hg19::chr10:91043420..91043437,+#_8ec8a8057bf2da38dbb35dd66430dfc4 | p1@ENST00000444849 |
| 1.14e-33 | FFCP PHASE1:Hg19::chr17:171147..171161,+#_436c39ff6a29ce67ef0ef1102968a96f | p@chr17:171147..171161, + |
| 1.14e-33 | FFCP PHASE2:Hg19::chr17:171147..171161,+#_436c39ff6a29ce67ef0ef1102968a96f | p@chr17:171147..171161, + |
| 1.52e-33 | FFCP PHASE1:Hg19::chr14:57960456..57960478,-#_b8c2c9b0bfacac5d693739b0251bfbf0 | p2@C14orf105 |
| 1.52e-33 | FFCP PHASE2:Hg19::chr14:57960456..57960478,-#_b8c2c9b0bfacac5d693739b0251bfbf0 | p2@C14orf105 |
| 1.8e-33 | FFCP PHASE1:Hg19::chr2:31361543..31361564,-#_ba7145e6ca27c17ca2603b495a9ca2a0 | p5@GALNT14 |
| 1.8e-33 | FFCP PHASE2:Hg19::chr2:31361543..31361564,-#_ba7145e6ca27c17ca2603b495a9ca2a0 | p5@GALNT14 |
| 2.35e-33 | FFCP PHASE2:Hg19::chr3:190105935..190105966,+#_5a600bdb78fb101783610e716fe86d16 | p1@CLDN16 |
| 2.35e-33 | FFCP PHASE1:Hg19::chr3:190105935..190105966,+#_5a600bdb78fb101783610e716fe86d16 | p1@CLDN16 |
| 4.12e-33 | FFCP PHASE1:Hg19::chr17:36065029..36065045,-#_3d4807ad33cc38e9024e38c54ed33393 | p@chr17:36065029..36065045, - |
| 4.12e-33 | FFCP PHASE2:Hg19::chr17:36065029..36065045,-#_3d4807ad33cc38e9024e38c54ed33393 | p@chr17:36065029..36065045, - |
| 8.12e-33 | FFCP PHASE2:Hg19::chr17:35293950..35293973,-#_1bda3e14d5c341d6c54e766c31fe578d | p1@ENST00000528383, p1@ENST00000529264, p1@ENST00000532387 |
| 8.12e-33 | FFCP PHASE1:Hg19::chr17:35293950..35293973,-#_1bda3e14d5c341d6c54e766c31fe578d | p1@ENST00000528383, p1@ENST00000529264, p1@ENST00000532387 |
| 1.25e-32 | FFCP PHASE2:Hg19::chr22:30653574..30653606,-#_89ee207196d2f8b8fdfb071713cfe119 | p@chr22:30653574..30653606, - |
| 1.25e-32 | FFCP PHASE1:Hg19::chr22:30653574..30653606,-#_89ee207196d2f8b8fdfb071713cfe119 | p@chr22:30653574..30653606, - |
