UBERON:0010042: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=1st arch mesenchyme | |name=1st arch mesenchyme | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0004362 | |part_of=UBERON:0004362 | ||
Latest revision as of 18:07, 12 September 2014
| Name: | 1st arch mesenchyme | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: | "mesenchyme of 1st arch" EXACT [EMAPA:16128] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0009494(pharyngeal arch mesenchymal region) |
|---|---|
| part_of: | UBERON:0004362(pharyngeal arch 1) |
Children
| is a: | UBERON:0010045 (1st arch maxillary mesenchyme),UBERON:0010259 (1st arch mesenchyme from neural crest) |
|---|---|
| part of: | UBERON:0010259 (1st arch mesenchyme from neural crest) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010042 (1st arch mesenchyme), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_7e0f807909cc0376a8244f4f1006f03d | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_7e0f807909cc0376a8244f4f1006f03d | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_a3a07980ee67b8f8327689c151c1173e | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_a3a07980ee67b8f8327689c151c1173e | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_a3a07980ee67b8f8327689c151c1173e | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_a3a07980ee67b8f8327689c151c1173e | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_a3a07980ee67b8f8327689c151c1173e | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_a3a07980ee67b8f8327689c151c1173e | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_a3a07980ee67b8f8327689c151c1173e | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_a3a07980ee67b8f8327689c151c1173e | p13@C17orf67 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_0999efe01d34115bddbc76c653cccec4 | p14@MAB21L2 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_0999efe01d34115bddbc76c653cccec4 | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_0999efe01d34115bddbc76c653cccec4 | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_0999efe01d34115bddbc76c653cccec4 | p14@MAB21L2 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_0fe39881f645abcabad83c268ec7071d | p@chr4:151505582..151505614, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_0fe39881f645abcabad83c268ec7071d | p@chr4:151505582..151505614, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_c3a8a015c7b1f73b699931326c12c7cd | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_c3a8a015c7b1f73b699931326c12c7cd | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_c3a8a015c7b1f73b699931326c12c7cd | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_c3a8a015c7b1f73b699931326c12c7cd | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_c3a8a015c7b1f73b699931326c12c7cd | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_c3a8a015c7b1f73b699931326c12c7cd | p9@C17orf67 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_5e1875384b43ac0c65114e5ea004ef3a | p@chr8:57802672..57802682, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_5e1875384b43ac0c65114e5ea004ef3a | p@chr8:57802672..57802682, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_9c9e32a4cdabd1289ef53937b694973e | p1@AK123925 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_9c9e32a4cdabd1289ef53937b694973e | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_9c9e32a4cdabd1289ef53937b694973e | p7@ALX1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_9c9e32a4cdabd1289ef53937b694973e | p7@ALX1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_9c9e32a4cdabd1289ef53937b694973e | p1@AK123925 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_9c9e32a4cdabd1289ef53937b694973e | p@chr5:75913767..75913778, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_de3b2a2b1969b5a66a2e5bd94dc1fabb | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_de3b2a2b1969b5a66a2e5bd94dc1fabb | p23@FLT1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_de3b2a2b1969b5a66a2e5bd94dc1fabb | p23@FLT1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_de3b2a2b1969b5a66a2e5bd94dc1fabb | p@chr2:33519090..33519092, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_07a473a501c39d29f7f441a7508a6ee9 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_07a473a501c39d29f7f441a7508a6ee9 | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_07a473a501c39d29f7f441a7508a6ee9 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_07a473a501c39d29f7f441a7508a6ee9 | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_07a473a501c39d29f7f441a7508a6ee9 | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_07a473a501c39d29f7f441a7508a6ee9 | p@chr8:57353779..57353790, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_3f11ed3c58d0afe0fdae7d30661e8e55 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_3f11ed3c58d0afe0fdae7d30661e8e55 | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_3f11ed3c58d0afe0fdae7d30661e8e55 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_3f11ed3c58d0afe0fdae7d30661e8e55 | p8@LHX8 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_3f11ed3c58d0afe0fdae7d30661e8e55 | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_3f11ed3c58d0afe0fdae7d30661e8e55 | p8@LHX8 |
| 2.21e-40 | FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_9311f2bb5ad134fd324dcdeb8ab51eb6 | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_9311f2bb5ad134fd324dcdeb8ab51eb6 | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_9311f2bb5ad134fd324dcdeb8ab51eb6 | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_9311f2bb5ad134fd324dcdeb8ab51eb6 | p@chr5:75912831..75912842, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_7a3614ccdd2c09b4d947851e60e3eaa8 | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_7a3614ccdd2c09b4d947851e60e3eaa8 | p@chr9:125165007..125165016, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_7a3614ccdd2c09b4d947851e60e3eaa8 | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_7a3614ccdd2c09b4d947851e60e3eaa8 | p@chr9:125165007..125165016, + |
| 1.84e-34 | FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_14276d677dd73bd0d1a50812ab10f24d | p5@PENK |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_14276d677dd73bd0d1a50812ab10f24d | p4@CPZ |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_14276d677dd73bd0d1a50812ab10f24d | p4@CPZ |
| 1.84e-34 | FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_14276d677dd73bd0d1a50812ab10f24d | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_14276d677dd73bd0d1a50812ab10f24d | p5@PENK |
| 1.84e-34 | FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_14276d677dd73bd0d1a50812ab10f24d | p@chr10:15760985..15760992, - |
| 2.58e-34 | FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_08c5fd27450ac46b2bb7b5086cbd9f99 | p9@SIX1 |
| 2.58e-34 | FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_08c5fd27450ac46b2bb7b5086cbd9f99 | p9@SIX1 |
| 5.05e-34 | FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_b6f63d1b7c5e8230ee8af7d13aea5960 | p@chr6:134327986..134327991, - |
| 5.05e-34 | FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_b6f63d1b7c5e8230ee8af7d13aea5960 | p@chr6:134327986..134327991, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_7b7faa1b7ba474fb741370a626946616 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_7b7faa1b7ba474fb741370a626946616 | p@chr13:58291223..58291226, + |
| 7.06e-34 | FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_7b7faa1b7ba474fb741370a626946616 | p@chr13:58291223..58291226, + |
| 7.06e-34 | FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_7b7faa1b7ba474fb741370a626946616 | p@chr8:57353676..57353688, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_a9e2807c83949cf113bbefa937a85e59 | p12@FBN2 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_a9e2807c83949cf113bbefa937a85e59 | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_a9e2807c83949cf113bbefa937a85e59 | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_a9e2807c83949cf113bbefa937a85e59 | p12@FBN2 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_a9e2807c83949cf113bbefa937a85e59 | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_a9e2807c83949cf113bbefa937a85e59 | p4@PLAC1 |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_9b0ca9acd8cc5b2ea9c25d31fa550c53 | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_9b0ca9acd8cc5b2ea9c25d31fa550c53 | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_9b0ca9acd8cc5b2ea9c25d31fa550c53 | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_9b0ca9acd8cc5b2ea9c25d31fa550c53 | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_9b0ca9acd8cc5b2ea9c25d31fa550c53 | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_9b0ca9acd8cc5b2ea9c25d31fa550c53 | p@chr8:57354360..57354367, + |
| 9.99e-30 | FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_770e17cab2a7e2042ac2083fc13ecc74 | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_770e17cab2a7e2042ac2083fc13ecc74 | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_770e17cab2a7e2042ac2083fc13ecc74 | p7@SHOX2 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_770e17cab2a7e2042ac2083fc13ecc74 | p7@SHOX2 |
| 1.33e-29 | FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_4d7803013a212a4fbb92a68e4cea1c68 | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_4d7803013a212a4fbb92a68e4cea1c68 | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_4d7803013a212a4fbb92a68e4cea1c68 | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_4d7803013a212a4fbb92a68e4cea1c68 | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_4d7803013a212a4fbb92a68e4cea1c68 | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_4d7803013a212a4fbb92a68e4cea1c68 | p@chr22:28193943..28193956, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_1186185fdfaa76173186962b4952372f | p@chr1:21904551..21904569, - |
| 1.78e-29 | FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_1186185fdfaa76173186962b4952372f | p@chr1:21904551..21904569, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_a94b33ec51aa4697536502689c98ddd0 | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_a94b33ec51aa4697536502689c98ddd0 | p18@MEF2D |
| 3.16e-29 | FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_a94b33ec51aa4697536502689c98ddd0 | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_a94b33ec51aa4697536502689c98ddd0 | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_a94b33ec51aa4697536502689c98ddd0 | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_a94b33ec51aa4697536502689c98ddd0 | p18@MEF2D |
| 4.2e-29 | FFCP PHASE2:Hg19::chr13:36046127..36046134,+#_b55d9562975c3185427e50e233941d81 | p@chr13:36046127..36046134, + |
| 4.2e-29 | FFCP PHASE1:Hg19::chr1:75602768..75602785,+#_b55d9562975c3185427e50e233941d81 | p@chr1:75602768..75602785, + |
