UBERON:0010882: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=limb bone pre-cartilage condensation | |name=limb bone pre-cartilage condensation | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002091 | |part_of=UBERON:0002091 | ||
Latest revision as of 18:09, 12 September 2014
| Name: | limb bone pre-cartilage condensation |
|---|---|
| Namespace: | FANTOM |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005866(pre-cartilage condensation),UBERON:0009749(limb mesenchyme),UBERON:0015061(limb endochondral element) |
|---|---|
| part_of: | UBERON:0002091(appendicular skeleton) |
Children
| is a: | UBERON:0006234 (femur pre-cartilage condensation) |
|---|---|
| develops from: | UBERON:0010881 (limb cartilage element) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010882 (limb bone pre-cartilage condensation), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.4e-49 | FFCP PHASE2:Mm9::chr11:77624716..77624729,+#_5e5dd5d9d639af073e075fee955a7ac9 | p26@Myo18a |
| 3.4e-49 | FFCP PHASE1:Mm9::chr11:77624716..77624729,+#_5e5dd5d9d639af073e075fee955a7ac9 | p26@Myo18a |
| 4.96e-49 | FFCP PHASE2:Mm9::chr2:32482372..32482381,+#_6fb6fd6b9456ad637be3257a6dd344d7 | p@chr2:32482372..32482381, + |
| 4.96e-49 | FFCP PHASE2:Mm9::chr9:21934585..21934591,-#_6fb6fd6b9456ad637be3257a6dd344d7 | p@chr9:21934585..21934591, - |
| 4.96e-49 | FFCP PHASE1:Mm9::chr8:75097542..75097549,+#_6fb6fd6b9456ad637be3257a6dd344d7 | p@chr8:75097542..75097549, + |
| 4.96e-49 | FFCP PHASE1:Mm9::chr2:32482372..32482381,+#_6fb6fd6b9456ad637be3257a6dd344d7 | p@chr2:32482372..32482381, + |
| 4.96e-49 | FFCP PHASE2:Mm9::chr8:75097542..75097549,+#_6fb6fd6b9456ad637be3257a6dd344d7 | p@chr8:75097542..75097549, + |
| 4.96e-49 | FFCP PHASE1:Mm9::chr9:21934585..21934591,-#_6fb6fd6b9456ad637be3257a6dd344d7 | p@chr9:21934585..21934591, - |
| 3.15e-44 | FFCP PHASE1:Mm9::chr6:51525810..51525817,+#_87a4ba7e0ba5e467de26fc6b8ba3123b | p@chr6:51525810..51525817, + |
| 3.15e-44 | FFCP PHASE2:Mm9::chr6:51525810..51525817,+#_87a4ba7e0ba5e467de26fc6b8ba3123b | p@chr6:51525810..51525817, + |
| 9.78e-40 | FFCP PHASE1:Mm9::chr19:4876870..4876880,-#_428f4f81a9d02910fecf232f8e8601f3 | p@chr19:4876870..4876880, - |
| 9.78e-40 | FFCP PHASE2:Mm9::chr19:4876870..4876880,-#_428f4f81a9d02910fecf232f8e8601f3 | p@chr19:4876870..4876880, - |
| 1.15e-39 | FFCP PHASE2:Mm9::chr1:174140324..174140335,-#_27f33de8458e49152cfb5bfe0166fef5 | p@chr1:174140324..174140335, - |
| 1.15e-39 | FFCP PHASE1:Mm9::chr11:67063327..67063335,+#_27f33de8458e49152cfb5bfe0166fef5 | p@chr11:67063327..67063335, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr11:67063327..67063335,+#_27f33de8458e49152cfb5bfe0166fef5 | p@chr11:67063327..67063335, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr1:174140324..174140335,-#_27f33de8458e49152cfb5bfe0166fef5 | p@chr1:174140324..174140335, - |
| 1.15e-39 | FFCP PHASE2:Mm9::chr6:4490674..4490679,+#_27f33de8458e49152cfb5bfe0166fef5 | p@chr6:4490674..4490679, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr16:24096441..24096449,+#_27f33de8458e49152cfb5bfe0166fef5 | p@chr16:24096441..24096449, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr16:24096441..24096449,+#_27f33de8458e49152cfb5bfe0166fef5 | p@chr16:24096441..24096449, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr6:4490674..4490679,+#_27f33de8458e49152cfb5bfe0166fef5 | p@chr6:4490674..4490679, + |
| 1.55e-39 | FFCP PHASE2:Mm9::chr1:174143249..174143260,-#_7ec2b49cc849ae2ac396b6a42166e8a4 | p@chr1:174143249..174143260, - |
| 1.55e-39 | FFCP PHASE1:Mm9::chr1:174143249..174143260,-#_7ec2b49cc849ae2ac396b6a42166e8a4 | p@chr1:174143249..174143260, - |
| 3.03e-39 | FFCP PHASE1:Mm9::chr6:51525869..51525891,+#_3a1d2ff5998ef59f423047e4870fe2d0 | p@chr6:51525869..51525891, + |
| 3.03e-39 | FFCP PHASE2:Mm9::chr6:51525869..51525891,+#_3a1d2ff5998ef59f423047e4870fe2d0 | p@chr6:51525869..51525891, + |
| 9.31e-39 | FFCP PHASE1:Mm9::chr11:102130083..102130092,+#_2d62dbdf8e4edac48d8805bf6c2b929e | p3@Asb16 |
| 9.31e-39 | FFCP PHASE2:Mm9::chr11:102130083..102130092,+#_2d62dbdf8e4edac48d8805bf6c2b929e | p3@Asb16 |
| 2.41e-35 | FFCP PHASE1:Mm9::chr7:133604286..133604297,-#_f03a8cb0b54813cdcb17068870d80f37 | p@chr7:133604286..133604297, - |
| 2.41e-35 | FFCP PHASE2:Mm9::chr7:133604286..133604297,-#_f03a8cb0b54813cdcb17068870d80f37 | p@chr7:133604286..133604297, - |
| 2.95e-35 | FFCP PHASE2:Mm9::chr4:138365748..138365759,-#_b8611acf6417fe55a992b78512bcaf80 | p5@Pla2g5 |
| 2.95e-35 | FFCP PHASE1:Mm9::chr4:138365748..138365759,-#_b8611acf6417fe55a992b78512bcaf80 | p5@Pla2g5 |
| 9.53e-34 | FFCP PHASE2:Mm9::chr8:74049600..74049612,-#_262d85871c2edb3632e09e88728091e4 | p2@uc009mdq.1 |
| 9.53e-34 | FFCP PHASE1:Mm9::chr8:74049600..74049612,-#_262d85871c2edb3632e09e88728091e4 | p2@uc009mdq.1 |
| 1.23e-33 | FFCP PHASE2:Mm9::chr2:164773241..164773248,+#_d01f31a39414e30b0e03f7fc1dfa4c44 | p3@Mmp9 |
| 1.23e-33 | FFCP PHASE1:Mm9::chr2:164773241..164773248,+#_d01f31a39414e30b0e03f7fc1dfa4c44 | p3@Mmp9 |
| 1.58e-33 | FFCP PHASE1:Mm9::chr7:3567707..3567718,-#_4a6e5e4ab94e32e80fd523440e1c7467 | p2@Oscar |
| 1.58e-33 | FFCP PHASE2:Mm9::chr7:3567707..3567718,-#_4a6e5e4ab94e32e80fd523440e1c7467 | p2@Oscar |
| 1.58e-33 | FFCP PHASE2:Mm9::chr1:166815111..166815121,-#_4a6e5e4ab94e32e80fd523440e1c7467 | p@chr1:166815111..166815121, - |
| 1.58e-33 | FFCP PHASE1:Mm9::chr1:166815111..166815121,-#_4a6e5e4ab94e32e80fd523440e1c7467 | p@chr1:166815111..166815121, - |
| 2.04e-33 | FFCP PHASE2:Mm9::chr11:75409652..75409664,+#_0e76cdd5f34188c0416eef99daab5b25 | p@chr11:75409652..75409664, + |
| 2.04e-33 | FFCP PHASE1:Mm9::chr11:75409652..75409664,+#_0e76cdd5f34188c0416eef99daab5b25 | p@chr11:75409652..75409664, + |
| 2.04e-33 | FFCP PHASE1:Mm9::chr9:70799951..70799962,-#_0e76cdd5f34188c0416eef99daab5b25 | p4@Lipc |
| 2.04e-33 | FFCP PHASE2:Mm9::chr9:70799951..70799962,-#_0e76cdd5f34188c0416eef99daab5b25 | p4@Lipc |
| 3.38e-33 | FFCP PHASE2:Mm9::chr15:102196702..102196713,-#_151987fa50143b52fa01e25611a778b8 | p6@Sp7 |
| 3.38e-33 | FFCP PHASE1:Mm9::chr15:102196702..102196713,-#_151987fa50143b52fa01e25611a778b8 | p6@Sp7 |
| 7.17e-33 | FFCP PHASE2:Mm9::chr8:126415826..126415839,+#_4e391cfb655f95ef4edf323482d99b4d | p@chr8:126415826..126415839, + |
| 7.17e-33 | FFCP PHASE1:Mm9::chr8:126415826..126415839,+#_4e391cfb655f95ef4edf323482d99b4d | p@chr8:126415826..126415839, + |
| 7.17e-33 | FFCP PHASE1:Mm9::chr18:76271498..76271508,+#_4e391cfb655f95ef4edf323482d99b4d | p@chr18:76271498..76271508, + |
| 7.17e-33 | FFCP PHASE2:Mm9::chr18:76271498..76271508,+#_4e391cfb655f95ef4edf323482d99b4d | p@chr18:76271498..76271508, + |
| 2.67e-30 | FFCP PHASE2:Mm9::chr2:32482387..32482399,+#_13257518d96d4333b0f78b17e459b0b3 | p@chr2:32482387..32482399, + |
| 2.67e-30 | FFCP PHASE1:Mm9::chr2:32482387..32482399,+#_13257518d96d4333b0f78b17e459b0b3 | p@chr2:32482387..32482399, + |
| 1.1e-29 | FFCP PHASE2:Mm9::chr15:58649683..58649688,-#_129daf64d73e44e0bcab729a4dc94a71 | p@chr15:58649683..58649688, - |
| 1.1e-29 | FFCP PHASE1:Mm9::chr15:58649683..58649688,-#_129daf64d73e44e0bcab729a4dc94a71 | p@chr15:58649683..58649688, - |
| 1.1e-29 | FFCP PHASE2:Mm9::chr12:70396969..70396979,+#_129daf64d73e44e0bcab729a4dc94a71 | p@chr12:70396969..70396979, + |
| 1.1e-29 | FFCP PHASE1:Mm9::chr12:70396969..70396979,+#_129daf64d73e44e0bcab729a4dc94a71 | p@chr12:70396969..70396979, + |
| 1.46e-29 | FFCP PHASE2:Mm9::chr7:133590998..133591009,-#_01f8dab4f1bf988093013c3f4ec2d07a | p@chr7:133590998..133591009, - |
| 1.46e-29 | FFCP PHASE1:Mm9::chr7:133590998..133591009,-#_01f8dab4f1bf988093013c3f4ec2d07a | p@chr7:133590998..133591009, - |
| 1.73e-29 | FFCP PHASE2:Mm9::chr18:60751417..60751432,-#_f361387f3e601771c105f622b9278c96 | p2@Myoz3 |
| 1.73e-29 | FFCP PHASE1:Mm9::chr18:60751417..60751432,-#_f361387f3e601771c105f622b9278c96 | p2@Myoz3 |
| 2.42e-29 | FFCP PHASE2:Mm9::chr11:67051354..67051366,+#_b4f157e252350753bbb5cf797d77ddfa | p2@Myh4 |
| 2.42e-29 | FFCP PHASE1:Mm9::chr11:67051354..67051366,+#_b4f157e252350753bbb5cf797d77ddfa | p2@Myh4 |
| 7.46e-29 | FFCP PHASE1:Mm9::chr1:57155729..57155740,-#_041affc6dd259362ac15d5cb19f13a62 | p@chr1:57155729..57155740, - |
| 7.46e-29 | FFCP PHASE2:Mm9::chr1:57155729..57155740,-#_041affc6dd259362ac15d5cb19f13a62 | p@chr1:57155729..57155740, - |
| 9.26e-29 | FFCP PHASE1:Mm9::chr11:67056544..67056589,-#_8e6fe809f9b1a50b24cf3e0a55e0ddf6 | p@chr11:67056544..67056589, - |
| 9.26e-29 | FFCP PHASE2:Mm9::chr11:67056544..67056589,-#_8e6fe809f9b1a50b24cf3e0a55e0ddf6 | p@chr11:67056544..67056589, - |
| 9.26e-29 | FFCP PHASE2:Mm9::chr4:43597258..43597265,-#_8e6fe809f9b1a50b24cf3e0a55e0ddf6 | p1@Msmp |
| 9.26e-29 | FFCP PHASE1:Mm9::chr4:43597258..43597265,-#_8e6fe809f9b1a50b24cf3e0a55e0ddf6 | p1@Msmp |
| 1.15e-28 | FFCP PHASE1:Mm9::chr6:90552017..90552024,+#_2afaa365063203df912429eec37d2c59 | p@chr6:90552017..90552024, + |
| 1.15e-28 | FFCP PHASE1:Mm9::chrY:2858251..2858257,+#_2afaa365063203df912429eec37d2c59 | p@chrY:2858251..2858257, + |
| 1.15e-28 | FFCP PHASE2:Mm9::chrY:2858251..2858257,+#_2afaa365063203df912429eec37d2c59 | p@chrY:2858251..2858257, + |
| 1.15e-28 | FFCP PHASE2:Mm9::chr6:90552017..90552024,+#_2afaa365063203df912429eec37d2c59 | p@chr6:90552017..90552024, + |
| 1.43e-28 | FFCP PHASE2:Mm9::chr6:34436258..34436292,+#_4fc33ffc83f996b9b994f0bb9453660e | p@chr6:34436258..34436292, + |
| 1.43e-28 | FFCP PHASE1:Mm9::chr6:34436258..34436292,+#_4fc33ffc83f996b9b994f0bb9453660e | p@chr6:34436258..34436292, + |
| 2.2e-28 | FFCP PHASE1:Mm9::chr11:67069796..67069817,-#_0096793aba0b7c4afa5f74f633bb34af | p@chr11:67069796..67069817, - |
| 2.2e-28 | FFCP PHASE2:Mm9::chr11:67069796..67069817,-#_0096793aba0b7c4afa5f74f633bb34af | p@chr11:67069796..67069817, - |
| 2.72e-28 | FFCP PHASE1:Mm9::chr8:107702369..107702386,+#_9d500260e4d46d0ff988238bf372394f | p@chr8:107702369..107702386, + |
| 2.72e-28 | FFCP PHASE2:Mm9::chr8:107702369..107702386,+#_9d500260e4d46d0ff988238bf372394f | p@chr8:107702369..107702386, + |
| 3.45e-28 | FFCP PHASE1:Mm9::chr18:78254135..78254146,-#_5127e8aedc60de2dda7e1f633feef80b | p1@Siglec15 |
| 3.45e-28 | FFCP PHASE2:Mm9::chr18:78254135..78254146,-#_5127e8aedc60de2dda7e1f633feef80b | p1@Siglec15 |
| 6.5e-28 | FFCP PHASE2:Mm9::chr7:133591490..133591500,-#_ea5508a71c21a06855b4e64ffafe07f9 | p6@Atp2a1 |
| 6.5e-28 | FFCP PHASE1:Mm9::chr7:133591490..133591500,-#_ea5508a71c21a06855b4e64ffafe07f9 | p6@Atp2a1 |
| 8.9e-28 | FFCP PHASE2:Mm9::chr7:133591156..133591165,-#_9f520fe98ff08a0fd0cc17b5a285e2d1 | p7@Atp2a1 |
| 8.9e-28 | FFCP PHASE1:Mm9::chr7:133591156..133591165,-#_9f520fe98ff08a0fd0cc17b5a285e2d1 | p7@Atp2a1 |
| 1.42e-27 | FFCP PHASE2:Mm9::chr7:133592162..133592188,-#_8c9913b202b82515f204a672d0135de7 | p@chr7:133592162..133592188, - |
| 1.42e-27 | FFCP PHASE1:Mm9::chr7:133592162..133592188,-#_8c9913b202b82515f204a672d0135de7 | p@chr7:133592162..133592188, - |
| 1.42e-27 | FFCP PHASE2:Mm9::chr7:133600635..133600663,+#_8c9913b202b82515f204a672d0135de7 | p@chr7:133600635..133600663, + |
| 1.42e-27 | FFCP PHASE1:Mm9::chr7:133600635..133600663,+#_8c9913b202b82515f204a672d0135de7 | p@chr7:133600635..133600663, + |
| 6.75e-27 | FFCP PHASE2:Mm9::chr11:94837662..94837673,-#_18421c914d6383db779c738486bb679c | p4@Sgca |
| 6.75e-27 | FFCP PHASE1:Mm9::chr11:94837662..94837673,-#_18421c914d6383db779c738486bb679c | p4@Sgca |
| 1.66e-26 | FFCP PHASE2:Mm9::chr5:104754379..104754387,+#_e99c82ebf1993f958eae99afef07cc50 | p1@Mepe |
| 1.66e-26 | FFCP PHASE1:Mm9::chr5:104754379..104754387,+#_e99c82ebf1993f958eae99afef07cc50 | p1@Mepe |
| 3.47e-26 | FFCP PHASE2:Mm9::chr16:32400888..32400899,+#_1ca02ff8a26215af5e01b5c4a2ee7b65 | p2@Tm4sf19 |
| 3.47e-26 | FFCP PHASE2:Mm9::chr12:81581216..81581231,+#_1ca02ff8a26215af5e01b5c4a2ee7b65 | p@chr12:81581216..81581231, + |
| 3.47e-26 | FFCP PHASE1:Mm9::chr12:81581216..81581231,+#_1ca02ff8a26215af5e01b5c4a2ee7b65 | p@chr12:81581216..81581231, + |
| 3.47e-26 | FFCP PHASE1:Mm9::chr16:32400888..32400899,+#_1ca02ff8a26215af5e01b5c4a2ee7b65 | p2@Tm4sf19 |
| 1.12e-25 | FFCP PHASE1:Mm9::chr17:34176173..34176200,+#_2cfd1adc071ba7b8ffc7190e18785753 | p5@Col11a2 |
| 1.12e-25 | FFCP PHASE2:Mm9::chr15:97806574..97806585,-#_2cfd1adc071ba7b8ffc7190e18785753 | p@chr15:97806574..97806585, - |
| 1.12e-25 | FFCP PHASE2:Mm9::chr17:34176173..34176200,+#_2cfd1adc071ba7b8ffc7190e18785753 | p5@Col11a2 |
| 1.12e-25 | FFCP PHASE1:Mm9::chr15:97806574..97806585,-#_2cfd1adc071ba7b8ffc7190e18785753 | p@chr15:97806574..97806585, - |
| 1.36e-25 | FFCP PHASE2:Mm9::chr18:78254174..78254185,-#_3b563e2adb0185d180e7024ddb49a0c4 | p2@Siglec15 |
| 1.36e-25 | FFCP PHASE1:Mm9::chr2:180890942..180890956,-#_3b563e2adb0185d180e7024ddb49a0c4 | p@chr2:180890942..180890956, - |
