FFCP PHASE1:Mm9::chr11:75229221..75229235,-: Difference between revisions
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{{FFCP|EntrezGene=20317|HGNC=|MCL_coexpression_id=5|UniProt=F6S1M4|association_with_transcript=0bp_to_ENSMUST00000167281_5end|description=CAGE_peak_7_at_Serpinf1_5end|id=chr11:75229221..75229235,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000219,5.68e-12,54;CL:0000182,3.18e-09,5;CL:0000151,1.91e-08,3;CL:0000499,1.91e-08,3;CL:0000327,1.91e-08,3;CL:0002453,1.91e-08,8;CL:0002320,3.32e-08,46;CL:0000134,3.32e-08,46;CL:0000128,1.31e-07,6;CL:0000126,1.31e-07,6;CL:0000127,1.31e-07,6;CL:0002605,9.82e-07,2;CL:0002604,9.82e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.65e-13!22;UBERON:0007499!7.65e-13!22;UBERON:0006925!7.65e-13!22;UBERON:0009497!7.65e-13!22;UBERON:0000015!7.65e-13!22;UBERON:0002423!7.65e-13!22;UBERON:0006235!7.65e-13!22;UBERON:0008835!7.65e-13!22;UBERON:0003894!7.65e-13!22;UBERON:0004161!7.65e-13!22;UBERON:0008836!7.65e-13!22;UBERON:0009854!7.41e-12!23;UBERON:0009856!7.41e-12!23;UBERON:0005256!3.85e-11!47;UBERON:0002365!3.80e-10!25;UBERON:0002330!3.80e-10!25;UBERON:0003914!2.04e-09!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.89e-21,22;UBERON:0007499,3.89e-21,22;UBERON:0006925,3.89e-21,22;UBERON:0009497,3.89e-21,22;UBERON:0000015,3.89e-21,22;UBERON:0002423,3.89e-21,22;UBERON:0006235,3.89e-21,22;UBERON:0008835,3.89e-21,22;UBERON:0003894,3.89e-21,22;UBERON:0004161,3.89e-21,22;UBERON:0008836,3.89e-21,22;UBERON:0009854,4.44e-20,23;UBERON:0009856,4.44e-20,23;UBERON:0002365,3.22e-18,25;UBERON:0002330,3.22e-18,25;UBERON:0005256,5.34e-12,45;UBERON:0003914,2.47e-11,47;UBERON:0002384,3.32e-08,46;UBERON:0000490,3.66e-08,66;UBERON:0003104,6.49e-08,61;UBERON:0009142,6.49e-08,61;UBERON:0005172,8.75e-08,49;UBERON:0005173,8.75e-08,49;UBERON:0002417,8.75e-08,49;UBERON:0000916,8.75e-08,49;UBERON:0003929,9.01e-08,55;UBERON:0002368,7.38e-07,60|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,7.30201544258348,5.06884656097573,0.917733760808408,3.12956537739216,1.52617609466313,3.95435128922049,4.27745777963423,0.699932108126813,0,0,0,0,0.514518872071894,0.85960031981627,0,0,0,0,1.0165335962074,1.77858959222228,0.899899717281399,2.96659908770092,0.7104801149461,1.79760066311043,0.384218305321555,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0.182975287204819,0,1.11673199600552,0,0,0,0.142371680799103,0,0,0,0.289864488701678,11.185510400758,2.03991400112325,9.71465744948071,5.84798775702902,1.79210754838934,1.26399978118577,1.36344258062446,2.07828803682295,0.35333957451034,0.422530259330042,0,2.54805239706646,0,0,0,0,0.68510327831436,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0.433798070759735,0.884610551949874,0.323533699894818,0.662524555381181,0,0,0,0,0,0.838705871541442,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0.509196819251581,0.373220911830279,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0,0.0680364991513279,0,0.187403449119458,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,1.40442637462647,1.02939162845886,0.568326998791185,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,3.55743152504579,0.166845105716094,0,0.224862112384854,1.01430060694251,0.482354319504834,0.763877555344259,0.863088412352432,1.45921704097532,1.64736847912849,11.5014565221884,2.97712758134803,2.80833905803104,0.757736633841335,1.07638448113147,1.4473305640901,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,1.14754461763673,0.252470927204373,0.315508219416257,0.390438744296638,0.646270193198397,0,0.668396022247182,0,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0,0.651547837414304,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,1.06949213515416,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.891844088010353,0,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0.120625849856312,0.119372344003136,0.328281799490123,0,0,0,0,0.185194527369712,0,0,0,0.339956859987711,0.139951452323658,0.414599921413271,0,0.158167996790568,0,0,0,0,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0,0.330916980914195,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.50695859978048,0.754505365544305,0.187283014939765,0.384150914429216,0.229741875822453,0.476293691283074,0,0.77163688185482,0.412085900803307,0,0,0,0,0.436039249896986,0.376437521661322,0.0846146078916765,0.365855945745545,0,0.543216455383447,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0.578719832943424,0.249810577937946,0.467863216890817,0.644613162144895,0.191288332068843,1.10295709559758,0|short_description=p7@Serpinf1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20317 | |||
|HGNC= | |||
|MCL_coexpression_id=5 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F6S1M4 | |||
|association_with_transcript=0bp_to_ENSMUST00000167281_5end | |||
|cluster_id=chr11:75229221..75229235,- | |||
|description=CAGE_peak_7_at_Serpinf1_5end | |||
|id=chr11:75229221..75229235,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,5.68e-12,54;CL:0000182,3.18e-09,5;CL:0000151,1.91e-08,3;CL:0000499,1.91e-08,3;CL:0000327,1.91e-08,3;CL:0002453,1.91e-08,8;CL:0002320,3.32e-08,46;CL:0000134,3.32e-08,46;CL:0000128,1.31e-07,6;CL:0000126,1.31e-07,6;CL:0000127,1.31e-07,6;CL:0002605,9.82e-07,2;CL:0002604,9.82e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.65e-13!22;UBERON:0007499!7.65e-13!22;UBERON:0006925!7.65e-13!22;UBERON:0009497!7.65e-13!22;UBERON:0000015!7.65e-13!22;UBERON:0002423!7.65e-13!22;UBERON:0006235!7.65e-13!22;UBERON:0008835!7.65e-13!22;UBERON:0003894!7.65e-13!22;UBERON:0004161!7.65e-13!22;UBERON:0008836!7.65e-13!22;UBERON:0009854!7.41e-12!23;UBERON:0009856!7.41e-12!23;UBERON:0005256!3.85e-11!47;UBERON:0002365!3.80e-10!25;UBERON:0002330!3.80e-10!25;UBERON:0003914!2.04e-09!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.89e-21,22;UBERON:0007499,3.89e-21,22;UBERON:0006925,3.89e-21,22;UBERON:0009497,3.89e-21,22;UBERON:0000015,3.89e-21,22;UBERON:0002423,3.89e-21,22;UBERON:0006235,3.89e-21,22;UBERON:0008835,3.89e-21,22;UBERON:0003894,3.89e-21,22;UBERON:0004161,3.89e-21,22;UBERON:0008836,3.89e-21,22;UBERON:0009854,4.44e-20,23;UBERON:0009856,4.44e-20,23;UBERON:0002365,3.22e-18,25;UBERON:0002330,3.22e-18,25;UBERON:0005256,5.34e-12,45;UBERON:0003914,2.47e-11,47;UBERON:0002384,3.32e-08,46;UBERON:0000490,3.66e-08,66;UBERON:0003104,6.49e-08,61;UBERON:0009142,6.49e-08,61;UBERON:0005172,8.75e-08,49;UBERON:0005173,8.75e-08,49;UBERON:0002417,8.75e-08,49;UBERON:0000916,8.75e-08,49;UBERON:0003929,9.01e-08,55;UBERON:0002368,7.38e-07,60 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,7.30201544258348,5.06884656097573,0.917733760808408,3.12956537739216,1.52617609466313,3.95435128922049,4.27745777963423,0.699932108126813,0,0,0,0,0.514518872071894,0.85960031981627,0,0,0,0,1.0165335962074,1.77858959222228,0.899899717281399,2.96659908770092,0.7104801149461,1.79760066311043,0.384218305321555,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0.182975287204819,0,1.11673199600552,0,0,0,0.142371680799103,0,0,0,0.289864488701678,11.185510400758,2.03991400112325,9.71465744948071,5.84798775702902,1.79210754838934,1.26399978118577,1.36344258062446,2.07828803682295,0.35333957451034,0.422530259330042,0,2.54805239706646,0,0,0,0,0.68510327831436,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0.433798070759735,0.884610551949874,0.323533699894818,0.662524555381181,0,0,0,0,0,0.838705871541442,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0.509196819251581,0.373220911830279,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0,0.0680364991513279,0,0.187403449119458,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,1.40442637462647,1.02939162845886,0.568326998791185,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,3.55743152504579,0.166845105716094,0,0.224862112384854,1.01430060694251,0.482354319504834,0.763877555344259,0.863088412352432,1.45921704097532,1.64736847912849,11.5014565221884,2.97712758134803,2.80833905803104,0.757736633841335,1.07638448113147,1.4473305640901,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,1.14754461763673,0.252470927204373,0.315508219416257,0.390438744296638,0.646270193198397,0,0.668396022247182,0,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0,0.651547837414304,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,1.06949213515416,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.891844088010353,0,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0.120625849856312,0.119372344003136,0.328281799490123,0,0,0,0,0.185194527369712,0,0,0,0.339956859987711,0.139951452323658,0.414599921413271,0,0.158167996790568,0,0,0,0,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0,0.330916980914195,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.50695859978048,0.754505365544305,0.187283014939765,0.384150914429216,0.229741875822453,0.476293691283074,0,0.77163688185482,0.412085900803307,0,0,0,0,0.436039249896986,0.376437521661322,0.0846146078916765,0.365855945745545,0,0.543216455383447,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0.578719832943424,0.249810577937946,0.467863216890817,0.644613162144895,0.191288332068843,1.10295709559758,0 | |||
|short_description=p7@Serpinf1 | |||
}} |
Revision as of 23:12, 3 August 2015
Short description: | p7@Serpinf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Serpinf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | 0bp_to_ENSMUST00000167281_5end |
EntrezGene: | 20317 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 5.68e-12 | 54 |
hepatocyte | 3.18e-09 | 5 |
secretory cell | 1.91e-08 | 3 |
stromal cell | 1.91e-08 | 3 |
extracellular matrix secreting cell | 1.91e-08 | 3 |
oligodendrocyte precursor cell | 1.91e-08 | 8 |
connective tissue cell | 3.32e-08 | 46 |
mesenchymal cell | 3.32e-08 | 46 |
oligodendrocyte | 1.31e-07 | 6 |
macroglial cell | 1.31e-07 | 6 |
astrocyte | 1.31e-07 | 6 |
astrocyte of the cerebral cortex | 9.82e-07 | 2 |
astrocyte of the hippocampus | 9.82e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 3.89e-21 | 22 |
epithelial sac | 3.89e-21 | 22 |
digestive gland | 3.89e-21 | 22 |
epithelium of foregut-midgut junction | 3.89e-21 | 22 |
anatomical boundary | 3.89e-21 | 22 |
hepatobiliary system | 3.89e-21 | 22 |
foregut-midgut junction | 3.89e-21 | 22 |
hepatic diverticulum | 3.89e-21 | 22 |
liver primordium | 3.89e-21 | 22 |
septum transversum | 3.89e-21 | 22 |
liver bud | 3.89e-21 | 22 |
digestive tract diverticulum | 4.44e-20 | 23 |
sac | 4.44e-20 | 23 |
exocrine gland | 3.22e-18 | 25 |
exocrine system | 3.22e-18 | 25 |
trunk mesenchyme | 5.34e-12 | 45 |
epithelial tube | 2.47e-11 | 47 |
connective tissue | 3.32e-08 | 46 |
unilaminar epithelium | 3.66e-08 | 66 |
mesenchyme | 6.49e-08 | 61 |
entire embryonic mesenchyme | 6.49e-08 | 61 |
abdomen element | 8.75e-08 | 49 |
abdominal segment element | 8.75e-08 | 49 |
abdominal segment of trunk | 8.75e-08 | 49 |
abdomen | 8.75e-08 | 49 |
gut epithelium | 9.01e-08 | 55 |
endocrine gland | 7.38e-07 | 60 |