FFCP PHASE1:Mm9::chr19:43764162..43764185,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=93685|HGNC=|MCL_coexpression_id=24|UniProt=Q3TCT4|association_with_transcript=0bp_to_ENSMUST00000081079,NM_053103,uc008hor.2,uc008hos.2_5end|description=CAGE_peak_2_at_Entpd7_5end|id=chr19:43764162..43764185,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,3.77e-09,9;CL:0002251,3.77e-09,9;CL:0000239,5.92e-09,6;CL:0000677,5.92e-09,6;CL:0000584,5.92e-09,6;CL:0000075,1.81e-07,7;CL:0002076,4.36e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.06e-20!43;UBERON:0005409!1.27e-16!59;UBERON:0000344!1.01e-09!15;UBERON:0001242!1.97e-08!13;UBERON:0000060!1.97e-08!13;UBERON:0001262!1.97e-08!13;UBERON:0004786!1.97e-08!13;UBERON:0002108!2.01e-08!16;UBERON:0004923!6.50e-07!24;UBERON:0001045!7.60e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.37e-27,31;UBERON:0005409,4.23e-17,47;UBERON:0000344,2.13e-15,15;UBERON:0001242,5.39e-13,13;UBERON:0001262,5.39e-13,13;UBERON:0004786,5.39e-13,13;UBERON:0001264,5.15e-11,12;UBERON:0003350,3.77e-09,9;UBERON:0004808,3.77e-09,9;UBERON:0001277,3.77e-09,9;UBERON:0004923,5.94e-08,24;UBERON:0000485,4.26e-07,11|phase1_expression=0.480446541314382,102.598769845972,120.574798438227,56.863271725684,72.6298808422203,18.9703577260435,15.1848216387092,0,0.422366166455,0.234064526321993,0,0,0.171200729931206,0.174840804837995,0.666219523631325,0.202475267389826,0,0.946386496074713,0.411343300817216,0,0.340173160604279,0.297872853602656,0.261199789138935,25.4387952241517,27.7585230091276,59.7201242679621,47.3838195774982,31.027857506768,2.66032787238923,5.79669298447841,4.21287970245079,0,0,0,0.866554859253824,2.82598897109437,3.06254034393554,0.418531630736908,0,0.523523743973798,2.35292595212406,0.683045484958446,1.45653105909346,0.251793635951155,0.304130793658544,0.367093504323363,0,0,0.878744730937887,0.58328969722285,0.279972843250725,1.43752564364972,1.00669563634642,0.725362142011344,0,0.771778308107841,1.14613375975503,1.03134418455488,0.404632921719196,0.528990979272033,1.26766280701236,1.0165335962074,0,0,0.988866362566974,0,0.898800331555214,0,0.311068836925433,0.405017814995072,0.210324961351382,1.42825492201902,0.883474163806454,0.367472397644862,0.287536413054709,0,0,0.383062014255563,0.307213066512487,0.659431438650969,0.640413505216868,0.52091337055676,0.558365998002762,0.56276261003168,0.61119299110724,0.589257170947335,1.13897344639282,1.1183966749518,0.681535739998656,0.226714680320357,0.869593466105033,0,0,0,0.649776417447669,0,0.842666520790511,0.170430322578058,1.03914401841148,0,0.563373679106722,1.28326477414318,0,7.11066703153331,0.216491041011214,0,0.505524445014783,3.76806803072898,0,1.48442139064825,0.346970653532272,0.608930956624282,0.230615497256059,0.753613202763113,0.117588707135705,0.251333182659351,0,0,0,0.161766849947409,0,1.45462575940567,1.86391761218122,0.292780797011547,0.83778682725382,15.8383374229327,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0.753926112677186,0.695297280769106,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,0.870848794270651,4.54900965180614,0.210441855886474,0.130120442962704,0.689706313300419,0.360124259610698,0.30140963567143,0.476255494059295,0.896796041993948,0.655912071918102,0.258703370739016,1.07783996466421,0.567318240503458,0.527853372491847,0.657587197282725,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0.702213187313235,0.51469581422943,0.284163499395593,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0.658239399653922,0,0,0.146199987425332,0.219550115291051,0,0.210289948564127,0.308713837137853,41.3023478729747,28.0317600663357,0,0,1.28867461322093,8.87407508342707,11.5636582799333,15.2180500890047,18.506633400236,20.2579714310533,10.8074139784116,8.55512829776949,9.16331209459865,22.4704852163555,9.51007419448655,12.3467589417708,0.189667900953082,0.456994050438915,0,0.407302655690628,0.581857461502877,0.631222379012867,0.632365371242573,0.442830443938806,0.31399745568275,0.370191491765402,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0,0.221464689648775,0.318909537314974,0.491589944147214,0.345369963731791,0,1.50791283939272,1.63171705145613,0.491764273019036,0.551873492609465,0.481651769963376,0.586058432961016,0.491804836130026,0,0,0.390438744296638,0.430846795465598,0,0.445597348164788,0.849229592366497,0.404810701674894,0,0,0.321321316421807,0.567760340833074,0.35613120733451,0.325773918707152,0.329940245945071,19.9117707509944,0.242780636154981,2.41858845571801,8.67583366877131,13.2885851796348,11.6825356218692,9.56184684722418,3.63533729477506,2.13898427030833,13.9056173491759,9.48767477174989,23.721174947083,0,0,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,0.658196082408484,0.608929898229199,0.469343416127421,0.63549621259146,0.220528398054962,0.32977250588296,0.645857706783622,0.542816324353403,0.119372344003136,0.164140899745061,17.7803310344209,0.556275906031529,0.512612642393558,0.619160603889667,0.555583582109135,0.376736914009382,0.683471138605126,0.228778173206523,0.509935289981566,0.139951452323658,0.690999869022119,0,0.474503990371703,0.203319467126849,1.72808545314882,0.836353184057875,1.09181281873089,0.944050424693745,0.0826534557253359,0.26175594198403,0.388844919875379,1.24267862617385,0,0.299033092087958,0,0.583353565032143,0.645799117388655,0.337912250981556,0.234714477291508,0.5208175393758,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0,0.179026695667481,0.596044064343795,0.721172697119813,0.443068581523732,0.302899349844443,0.0762068066549998,0.504130925684203,0.584747284438515,0.384847366561318,0.116876902181569,0.680191150845634,0.665957860122194,0.179427713218951,0.335769232728157,0.386379188064381,0.563047426353546,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0.515559547031063,0.685082519770642,0,0,0.900642406448441,0.453142408984205,0,0.207574695168353,0,0.512200817262403,0.243106717068294,0.419226325255965,0.919217542250071,0.666740183404846,0.618105171716683,0.962757628775446,1.26348605881899,1.01391719956096,1.50901073108861,0.936415074698824,0.89635213366817,1.49332219284595,0.476293691283074,1.27472758539341,1.92909220463705,0.412085900803307,0.441596760403192,0.342869252385415,1.06485483695602,0.715308569841963,0.581385666529314,1.12931256498397,1.18460451048347,0.548783918618318,0.526139422875686,1.22223702461276,2.24456908663095,1.30498519936592,1.28055827088233,0.818462086339379,1.23949472948773,0.578719832943424,1.24905288968973,1.16965804222704,0.429742108096597,0,0.661774257358546,0.463735671240843|short_description=p2@Entpd7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:93685 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TCT4 | |||
|association_with_transcript=0bp_to_ENSMUST00000081079,NM_053103,uc008hor.2,uc008hos.2_5end | |||
|cluster_id=chr19:43764162..43764185,+ | |||
|description=CAGE_peak_2_at_Entpd7_5end | |||
|id=chr19:43764162..43764185,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.77e-09,9;CL:0002251,3.77e-09,9;CL:0000239,5.92e-09,6;CL:0000677,5.92e-09,6;CL:0000584,5.92e-09,6;CL:0000075,1.81e-07,7;CL:0002076,4.36e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.06e-20!43;UBERON:0005409!1.27e-16!59;UBERON:0000344!1.01e-09!15;UBERON:0001242!1.97e-08!13;UBERON:0000060!1.97e-08!13;UBERON:0001262!1.97e-08!13;UBERON:0004786!1.97e-08!13;UBERON:0002108!2.01e-08!16;UBERON:0004923!6.50e-07!24;UBERON:0001045!7.60e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.37e-27,31;UBERON:0005409,4.23e-17,47;UBERON:0000344,2.13e-15,15;UBERON:0001242,5.39e-13,13;UBERON:0001262,5.39e-13,13;UBERON:0004786,5.39e-13,13;UBERON:0001264,5.15e-11,12;UBERON:0003350,3.77e-09,9;UBERON:0004808,3.77e-09,9;UBERON:0001277,3.77e-09,9;UBERON:0004923,5.94e-08,24;UBERON:0000485,4.26e-07,11 | |||
|phase1_expression=0.480446541314382,102.598769845972,120.574798438227,56.863271725684,72.6298808422203,18.9703577260435,15.1848216387092,0,0.422366166455,0.234064526321993,0,0,0.171200729931206,0.174840804837995,0.666219523631325,0.202475267389826,0,0.946386496074713,0.411343300817216,0,0.340173160604279,0.297872853602656,0.261199789138935,25.4387952241517,27.7585230091276,59.7201242679621,47.3838195774982,31.027857506768,2.66032787238923,5.79669298447841,4.21287970245079,0,0,0,0.866554859253824,2.82598897109437,3.06254034393554,0.418531630736908,0,0.523523743973798,2.35292595212406,0.683045484958446,1.45653105909346,0.251793635951155,0.304130793658544,0.367093504323363,0,0,0.878744730937887,0.58328969722285,0.279972843250725,1.43752564364972,1.00669563634642,0.725362142011344,0,0.771778308107841,1.14613375975503,1.03134418455488,0.404632921719196,0.528990979272033,1.26766280701236,1.0165335962074,0,0,0.988866362566974,0,0.898800331555214,0,0.311068836925433,0.405017814995072,0.210324961351382,1.42825492201902,0.883474163806454,0.367472397644862,0.287536413054709,0,0,0.383062014255563,0.307213066512487,0.659431438650969,0.640413505216868,0.52091337055676,0.558365998002762,0.56276261003168,0.61119299110724,0.589257170947335,1.13897344639282,1.1183966749518,0.681535739998656,0.226714680320357,0.869593466105033,0,0,0,0.649776417447669,0,0.842666520790511,0.170430322578058,1.03914401841148,0,0.563373679106722,1.28326477414318,0,7.11066703153331,0.216491041011214,0,0.505524445014783,3.76806803072898,0,1.48442139064825,0.346970653532272,0.608930956624282,0.230615497256059,0.753613202763113,0.117588707135705,0.251333182659351,0,0,0,0.161766849947409,0,1.45462575940567,1.86391761218122,0.292780797011547,0.83778682725382,15.8383374229327,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0.753926112677186,0.695297280769106,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,0.870848794270651,4.54900965180614,0.210441855886474,0.130120442962704,0.689706313300419,0.360124259610698,0.30140963567143,0.476255494059295,0.896796041993948,0.655912071918102,0.258703370739016,1.07783996466421,0.567318240503458,0.527853372491847,0.657587197282725,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0.702213187313235,0.51469581422943,0.284163499395593,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0.658239399653922,0,0,0.146199987425332,0.219550115291051,0,0.210289948564127,0.308713837137853,41.3023478729747,28.0317600663357,0,0,1.28867461322093,8.87407508342707,11.5636582799333,15.2180500890047,18.506633400236,20.2579714310533,10.8074139784116,8.55512829776949,9.16331209459865,22.4704852163555,9.51007419448655,12.3467589417708,0.189667900953082,0.456994050438915,0,0.407302655690628,0.581857461502877,0.631222379012867,0.632365371242573,0.442830443938806,0.31399745568275,0.370191491765402,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0,0.221464689648775,0.318909537314974,0.491589944147214,0.345369963731791,0,1.50791283939272,1.63171705145613,0.491764273019036,0.551873492609465,0.481651769963376,0.586058432961016,0.491804836130026,0,0,0.390438744296638,0.430846795465598,0,0.445597348164788,0.849229592366497,0.404810701674894,0,0,0.321321316421807,0.567760340833074,0.35613120733451,0.325773918707152,0.329940245945071,19.9117707509944,0.242780636154981,2.41858845571801,8.67583366877131,13.2885851796348,11.6825356218692,9.56184684722418,3.63533729477506,2.13898427030833,13.9056173491759,9.48767477174989,23.721174947083,0,0,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,0.658196082408484,0.608929898229199,0.469343416127421,0.63549621259146,0.220528398054962,0.32977250588296,0.645857706783622,0.542816324353403,0.119372344003136,0.164140899745061,17.7803310344209,0.556275906031529,0.512612642393558,0.619160603889667,0.555583582109135,0.376736914009382,0.683471138605126,0.228778173206523,0.509935289981566,0.139951452323658,0.690999869022119,0,0.474503990371703,0.203319467126849,1.72808545314882,0.836353184057875,1.09181281873089,0.944050424693745,0.0826534557253359,0.26175594198403,0.388844919875379,1.24267862617385,0,0.299033092087958,0,0.583353565032143,0.645799117388655,0.337912250981556,0.234714477291508,0.5208175393758,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0,0.179026695667481,0.596044064343795,0.721172697119813,0.443068581523732,0.302899349844443,0.0762068066549998,0.504130925684203,0.584747284438515,0.384847366561318,0.116876902181569,0.680191150845634,0.665957860122194,0.179427713218951,0.335769232728157,0.386379188064381,0.563047426353546,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0.515559547031063,0.685082519770642,0,0,0.900642406448441,0.453142408984205,0,0.207574695168353,0,0.512200817262403,0.243106717068294,0.419226325255965,0.919217542250071,0.666740183404846,0.618105171716683,0.962757628775446,1.26348605881899,1.01391719956096,1.50901073108861,0.936415074698824,0.89635213366817,1.49332219284595,0.476293691283074,1.27472758539341,1.92909220463705,0.412085900803307,0.441596760403192,0.342869252385415,1.06485483695602,0.715308569841963,0.581385666529314,1.12931256498397,1.18460451048347,0.548783918618318,0.526139422875686,1.22223702461276,2.24456908663095,1.30498519936592,1.28055827088233,0.818462086339379,1.23949472948773,0.578719832943424,1.24905288968973,1.16965804222704,0.429742108096597,0,0.661774257358546,0.463735671240843 | |||
|short_description=p2@Entpd7 | |||
}} |
Revision as of 03:29, 4 August 2015
Short description: | p2@Entpd7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Entpd7_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000081079, NM_053103, uc008hor.2, uc008hos.2_5end |
EntrezGene: | 93685 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.77e-09 | 9 |
epithelial cell of alimentary canal | 3.77e-09 | 9 |
brush border epithelial cell | 5.92e-09 | 6 |
gut absorptive cell | 5.92e-09 | 6 |
enterocyte | 5.92e-09 | 6 |
columnar/cuboidal epithelial cell | 1.81e-07 | 7 |
endo-epithelial cell | 4.36e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.37e-27 | 31 |
gastrointestinal system | 4.23e-17 | 47 |
mucosa | 2.13e-15 | 15 |
intestinal mucosa | 5.39e-13 | 13 |
wall of intestine | 5.39e-13 | 13 |
gastrointestinal system mucosa | 5.39e-13 | 13 |
pancreas | 5.15e-11 | 12 |
epithelium of mucosa | 3.77e-09 | 9 |
gastrointestinal system epithelium | 3.77e-09 | 9 |
intestinal epithelium | 3.77e-09 | 9 |
organ component layer | 5.94e-08 | 24 |
simple columnar epithelium | 4.26e-07 | 11 |